RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 C7orf77A4D0Y5 90 aa1.43□□□□□ -2.18
LRRC28-212ENST00000558911 PDCD5O14737 125 aa1.43□□□□□ -2.18
LRRC28-212ENST00000558911 HMGN2P05204 90 aaKnown RBP1.43□□□□□ -2.18
LRRC28-212ENST00000558911 LINC00643Q86TS7 51 aa1.43□□□□□ -2.18
LRRC28-212ENST00000558911 CFDP00746 253 aaPredicted RBP1.42□□□□□ -2.18
LRRC28-212ENST00000558911 ARMS2P0C7Q2 107 aa1.42□□□□□ -2.18
LRRC28-212ENST00000558911 SPINT3P49223 89 aa1.42□□□□□ -2.18
LRRC28-212ENST00000558911 ANKRD36A6QL64 1941 aa1.42□□□□□ -2.18
LRRC28-212ENST00000558911 IQCF6A8MYZ5 107 aa1.41□□□□□ -2.18
LRRC28-212ENST00000558911 LEPROTL1O95214 131 aa1.41□□□□□ -2.18
LRRC28-212ENST00000558911 LY6G6CO95867 125 aa1.41□□□□□ -2.18
LRRC28-212ENST00000558911 ACYP1P07311 99 aa1.41□□□□□ -2.18
LRRC28-212ENST00000558911 MGPP08493 103 aa1.41□□□□□ -2.18
LRRC28-212ENST00000558911 Q5BKY6 102 aa1.41□□□□□ -2.18
LRRC28-212ENST00000558911 C10orf99Q6UWK7 81 aa1.41□□□□□ -2.18
LRRC28-212ENST00000558911 LINC00575Q6W349 94 aa1.41□□□□□ -2.18
LRRC28-212ENST00000558911 LINC01600Q96MT4 127 aa1.41□□□□□ -2.18
LRRC28-212ENST00000558911 COX17Q14061 63 aa1.4□□□□□ -2.19
LRRC28-212ENST00000558911 KRTAP19-6Q3LI70 58 aa1.4□□□□□ -2.19
LRRC28-212ENST00000558911 SMIM4Q8WVI0 70 aa1.4□□□□□ -2.19
LRRC28-212ENST00000558911 MYMXA0A1B0GTQ4 84 aa1.39□□□□□ -2.19
LRRC28-212ENST00000558911 PLGLAQ15195 96 aa1.39□□□□□ -2.19
LRRC28-212ENST00000558911 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.39□□□□□ -2.19
LRRC28-212ENST00000558911 C18orf32Q8TCD1 76 aa1.39□□□□□ -2.19
LRRC28-212ENST00000558911 PROK2Q9HC23 129 aa1.39□□□□□ -2.19
LRRC28-212ENST00000558911 D6R8Y8 96 aa1.38□□□□□ -2.19
LRRC28-212ENST00000558911 HMGN3Q15651 99 aa1.38□□□□□ -2.19
LRRC28-212ENST00000558911 MUSTN1Q8IVN3 82 aa1.38□□□□□ -2.19
LRRC28-212ENST00000558911 DEFB107AQ8IZN7 70 aa1.38□□□□□ -2.19
LRRC28-212ENST00000558911 A0A096LNT2 108 aa1.37□□□□□ -2.19
LRRC28-212ENST00000558911 GVQW2A0A096LPI5 108 aaPredicted RBP1.37□□□□□ -2.19
LRRC28-212ENST00000558911 C6orf201Q7Z4U5 140 aa1.37□□□□□ -2.19
LRRC28-212ENST00000558911 SMIM11BQ8TCY0 68 aa1.37□□□□□ -2.19
LRRC28-212ENST00000558911 SPRR4Q96PI1 79 aa1.37□□□□□ -2.19
LRRC28-212ENST00000558911 LINC00472Q9H8W2 130 aa1.37□□□□□ -2.19
LRRC28-212ENST00000558911 CEBPZOSA8MTT3 80 aa1.36□□□□□ -2.19
LRRC28-212ENST00000558911 SPINK13Q1W4C9 94 aa1.36□□□□□ -2.19
LRRC28-212ENST00000558911 PLAC4Q8WY50 150 aa1.36□□□□□ -2.19
LRRC28-212ENST00000558911 MUC17Q685J3 4493 aa1.36□□□□□ -2.19
LRRC28-212ENST00000558911 DNAJC13O75165 2243 aa1.35□□□□□ -2.19
LRRC28-212ENST00000558911 G3V318 75 aa1.35□□□□□ -2.19
LRRC28-212ENST00000558911 GCHFRP30047 84 aa1.35□□□□□ -2.19
LRRC28-212ENST00000558911 HEPN1Q6WQI6 88 aa1.35□□□□□ -2.19
LRRC28-212ENST00000558911 Q6ZRX8 168 aa1.35□□□□□ -2.19
LRRC28-212ENST00000558911 LINC00846Q9NV44 126 aa1.35□□□□□ -2.19
LRRC28-212ENST00000558911 UBE2D4Q9Y2X8 147 aa1.35□□□□□ -2.19
LRRC28-212ENST00000558911 H0Y9P7 68 aa1.34□□□□□ -2.19
LRRC28-212ENST00000558911 SMIM13P0DJ93 91 aa1.34□□□□□ -2.19
LRRC28-212ENST00000558911 RPL37P61927 97 aaKnown RBP1.34□□□□□ -2.19
LRRC28-212ENST00000558911 C10orf113Q5VZT2 155 aa1.34□□□□□ -2.19
LRRC28-212ENST00000558911 CD163L1Q9NR16 1453 aa1.34□□□□□ -2.19
LRRC28-212ENST00000558911 UMAD1C9J7I0 102 aa1.33□□□□□ -2.2
LRRC28-212ENST00000558911 SPINK7P58062 85 aa1.33□□□□□ -2.2
LRRC28-212ENST00000558911 GNGT1P63211 74 aa1.33□□□□□ -2.2
LRRC28-212ENST00000558911 HAMPP81172 84 aa1.33□□□□□ -2.2
LRRC28-212ENST00000558911 Q6JHZ5 121 aa1.33□□□□□ -2.2
LRRC28-212ENST00000558911 TMEM263Q8WUH6 116 aaKnown RBP1.33□□□□□ -2.2
LRRC28-212ENST00000558911 LYNX1P0DP58 116 aa1.32□□□□□ -2.2
LRRC28-212ENST00000558911 DEFB121Q5J5C9 76 aa1.32□□□□□ -2.2
LRRC28-212ENST00000558911 KRTAP13-1Q8IUC0 172 aa1.32□□□□□ -2.2
LRRC28-212ENST00000558911 DEFB119Q8N690 84 aa1.32□□□□□ -2.2
LRRC28-212ENST00000558911 PLAC8Q9NZF1 115 aa1.32□□□□□ -2.2
LRRC28-212ENST00000558911 KRTAP4-1Q9BYQ7 146 aa1.31□□□□□ -2.2
LRRC28-212ENST00000558911 TRBV6-1A0A0K0K1D8 114 aa1.3□□□□□ -2.2
LRRC28-212ENST00000558911 ATP5EP2Q5VTU8 51 aa1.3□□□□□ -2.2
LRRC28-212ENST00000558911 SPATA8Q6RVD6 105 aa1.3□□□□□ -2.2
LRRC28-212ENST00000558911 TRBV7-4A0A0J9YYF1 115 aa1.29□□□□□ -2.2
LRRC28-212ENST00000558911 A0A1B0GUT8 65 aa1.29□□□□□ -2.2
LRRC28-212ENST00000558911 KRTAP12-4P60329 112 aa1.29□□□□□ -2.2
LRRC28-212ENST00000558911 DNAH8Q96JB1 4490 aa1.29□□□□□ -2.2
LRRC28-212ENST00000558911 TNCP24821 2201 aa1.28□□□□□ -2.2
LRRC28-212ENST00000558911 A0A087WXM4 84 aa1.28□□□□□ -2.2
LRRC28-212ENST00000558911 K7EIL1 84 aa1.28□□□□□ -2.2
LRRC28-212ENST00000558911 SPRR2EP22531 72 aa1.28□□□□□ -2.2
LRRC28-212ENST00000558911 SPRR2BP35325 72 aa1.28□□□□□ -2.2
LRRC28-212ENST00000558911 SPRR2AP35326 72 aa1.28□□□□□ -2.2
LRRC28-212ENST00000558911 A0A1B0GU69 56 aa1.27□□□□□ -2.21
LRRC28-212ENST00000558911 S100ZQ8WXG8 99 aa1.27□□□□□ -2.21
LRRC28-212ENST00000558911 HILPDAQ9Y5L2 63 aa1.27□□□□□ -2.21
LRRC28-212ENST00000558911 SORL1Q92673 2214 aa1.26□□□□□ -2.21
LRRC28-212ENST00000558911 S100A3P33764 101 aa1.26□□□□□ -2.21
LRRC28-212ENST00000558911 IFI27P40305 119 aaPredicted RBP1.26□□□□□ -2.21
LRRC28-212ENST00000558911 H3BVH4 76 aa1.25□□□□□ -2.21
LRRC28-212ENST00000558911 KRTAP12-3P60328 96 aa1.25□□□□□ -2.21
LRRC28-212ENST00000558911 SSBP3-AS1Q7Z2R9 100 aa1.25□□□□□ -2.21
LRRC28-212ENST00000558911 UBE2DNLQ8IWF7 75 aa1.25□□□□□ -2.21
LRRC28-212ENST00000558911 SPRR2DP22532 72 aa1.24□□□□□ -2.21
LRRC28-212ENST00000558911 FXYD6P3P58550 94 aa1.24□□□□□ -2.21
LRRC28-212ENST00000558911 DEFB112Q30KQ8 113 aa1.24□□□□□ -2.21
LRRC28-212ENST00000558911 Q6ZSA8 131 aa1.24□□□□□ -2.21
LRRC28-212ENST00000558911 TRAV21A0A0B4J279 112 aa1.23□□□□□ -2.21
LRRC28-212ENST00000558911 COX8AP10176 69 aa1.23□□□□□ -2.21
LRRC28-212ENST00000558911 MT4P47944 62 aa1.23□□□□□ -2.21
LRRC28-212ENST00000558911 Q5VSD8 79 aa1.23□□□□□ -2.21
LRRC28-212ENST00000558911 WFDC9Q8NEX5 89 aa1.23□□□□□ -2.21
LRRC28-212ENST00000558911 A0A087WWC5 75 aa1.22□□□□□ -2.21
LRRC28-212ENST00000558911 ANGP03950 147 aaKnown RBP1.22□□□□□ -2.21
LRRC28-212ENST00000558911 IFI6P09912 130 aa1.22□□□□□ -2.21
LRRC28-212ENST00000558911 LINC00959A0A1B0GUT2 108 aa1.21□□□□□ -2.22
LRRC28-212ENST00000558911 GAFA1Q96PS6 74 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms