RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	LINC01547	P58512	204 aa	Predicted RBP	3.9	□□□□□ -1.79
MARK3-215	ENST00000558787	UBE2V1	Q13404	147 aa		3.9	□□□□□ -1.79
MARK3-215	ENST00000558787		Q8N377	158 aa		3.9	□□□□□ -1.79
MARK3-215	ENST00000558787		F8W1H4	67 aa		3.89	□□□□□ -1.79
MARK3-215	ENST00000558787		F8WEM9	126 aa		3.89	□□□□□ -1.79
MARK3-215	ENST00000558787	SSBP3-AS1	Q7Z2R9	100 aa		3.89	□□□□□ -1.79
MARK3-215	ENST00000558787	ANKRD29	Q8N6D5	301 aa		3.89	□□□□□ -1.79
MARK3-215	ENST00000558787	NDUFV3	P56181	108 aa	Known RBP	3.88	□□□□□ -1.79
MARK3-215	ENST00000558787	ASB16-AS1	Q495Z4	193 aa		3.88	□□□□□ -1.79
MARK3-215	ENST00000558787	C9orf153	Q5TBE3	101 aa		3.88	□□□□□ -1.79
MARK3-215	ENST00000558787	PRO0461	Q9UI25	63 aa		3.88	□□□□□ -1.79
MARK3-215	ENST00000558787	JMJD7-PLA2G4B	H0Y9G9	81 aa		3.87	□□□□□ -1.79
MARK3-215	ENST00000558787	HRCT1	Q6UXD1	115 aa		3.87	□□□□□ -1.79
MARK3-215	ENST00000558787	SMIM29	Q86T20	159 aa		3.87	□□□□□ -1.79
MARK3-215	ENST00000558787	IGLV8-61	A0A075B6I0	122 aa		3.86	□□□□□ -1.79
MARK3-215	ENST00000558787		Q6JHZ5	121 aa		3.86	□□□□□ -1.79
MARK3-215	ENST00000558787	MTURN	Q8N3F0	131 aa		3.86	□□□□□ -1.79
MARK3-215	ENST00000558787	SEC61B	P60468	96 aa	Known RBP	3.85	□□□□□ -1.79
MARK3-215	ENST00000558787	RBM3	P98179	157 aa	Known RBP	3.85	□□□□□ -1.79
MARK3-215	ENST00000558787	PDE6G	P18545	87 aa		3.84	□□□□□ -1.79
MARK3-215	ENST00000558787	RPS29	P62273	56 aa	Known RBP	3.84	□□□□□ -1.79
MARK3-215	ENST00000558787	OBSCN-AS1	Q96MR7	158 aa		3.84	□□□□□ -1.79
MARK3-215	ENST00000558787	DSCR8	Q96T75	97 aa		3.84	□□□□□ -1.79
MARK3-215	ENST00000558787	TEN1	Q86WV5	123 aa		3.83	□□□□□ -1.8
MARK3-215	ENST00000558787	LOC110117498	A0A087WWA1	95 aa		3.82	□□□□□ -1.8
MARK3-215	ENST00000558787		A0A0G2JQZ4	141 aa		3.82	□□□□□ -1.8
MARK3-215	ENST00000558787	TRBV7-4	A0A0J9YYF1	115 aa		3.82	□□□□□ -1.8
MARK3-215	ENST00000558787	C9orf92	A6NGG3	77 aa		3.82	□□□□□ -1.8
MARK3-215	ENST00000558787	ETDB	Q3ZM63	59 aa		3.82	□□□□□ -1.8
MARK3-215	ENST00000558787	IGFL1	Q6UW32	110 aa		3.82	□□□□□ -1.8
MARK3-215	ENST00000558787		A0A1B0GV72	72 aa		3.81	□□□□□ -1.8
MARK3-215	ENST00000558787	CD164	Q04900	197 aa		3.81	□□□□□ -1.8
MARK3-215	ENST00000558787	C14orf132	Q9NPU4	83 aa		3.81	□□□□□ -1.8
MARK3-215	ENST00000558787		A0A1B0GW54	56 aa		3.8	□□□□□ -1.8
MARK3-215	ENST00000558787	PCOTH	Q58A44	107 aa		3.8	□□□□□ -1.8
MARK3-215	ENST00000558787		Q6Q795	121 aa		3.8	□□□□□ -1.8
MARK3-215	ENST00000558787		Q6ZQT0	140 aa		3.8	□□□□□ -1.8
MARK3-215	ENST00000558787	CCK	P06307	115 aa		3.79	□□□□□ -1.8
MARK3-215	ENST00000558787	KRTAP19-2	Q3LHN2	52 aa		3.79	□□□□□ -1.8
MARK3-215	ENST00000558787	FSIP2	Q5CZC0	6907 aa		3.79	□□□□□ -1.8
MARK3-215	ENST00000558787		A0A1W2PNM2	257 aa		3.78	□□□□□ -1.8
MARK3-215	ENST00000558787	VPS25	Q9BRG1	176 aa		3.78	□□□□□ -1.8
MARK3-215	ENST00000558787	LIMD2	Q9BT23	127 aa		3.78	□□□□□ -1.8
MARK3-215	ENST00000558787	TRBV7-7	A0A0K0K1E9	115 aa		3.77	□□□□□ -1.81
MARK3-215	ENST00000558787	SS18L2	Q9UHA2	77 aa		3.77	□□□□□ -1.81
MARK3-215	ENST00000558787		J3QR89	54 aa		3.76	□□□□□ -1.81
MARK3-215	ENST00000558787	MT1H	P80294	61 aa		3.76	□□□□□ -1.81
MARK3-215	ENST00000558787	C1orf195	Q5TG92	126 aa		3.76	□□□□□ -1.81
MARK3-215	ENST00000558787		Q5XG85	94 aa		3.76	□□□□□ -1.81
MARK3-215	ENST00000558787		A0A087WSZ3	146 aa		3.75	□□□□□ -1.81
MARK3-215	ENST00000558787	FAM240A	A0A1B0GVK7	77 aa		3.75	□□□□□ -1.81
MARK3-215	ENST00000558787	ACYP1	P07311	99 aa		3.75	□□□□□ -1.81
MARK3-215	ENST00000558787		K7ERU9	68 aa		3.72	□□□□□ -1.81
MARK3-215	ENST00000558787	NREP	Q16612	68 aa		3.72	□□□□□ -1.81
MARK3-215	ENST00000558787	UBL5	Q9BZL1	73 aa		3.72	□□□□□ -1.81
MARK3-215	ENST00000558787	CRCT1	Q9UGL9	99 aa		3.72	□□□□□ -1.81
MARK3-215	ENST00000558787	RPL37	P61927	97 aa	Known RBP	3.71	□□□□□ -1.82
MARK3-215	ENST00000558787		J3KT08	172 aa		3.7	□□□□□ -1.82
MARK3-215	ENST00000558787	LINC00846	Q9NV44	126 aa		3.7	□□□□□ -1.82
MARK3-215	ENST00000558787	FLG	P20930	4061 aa	Predicted RBP	3.7	□□□□□ -1.82
MARK3-215	ENST00000558787		M0R2T5	61 aa		3.69	□□□□□ -1.82
MARK3-215	ENST00000558787		Q6ZVQ6	151 aa		3.69	□□□□□ -1.82
MARK3-215	ENST00000558787	LINC00472	Q9H8W2	130 aa		3.69	□□□□□ -1.82
MARK3-215	ENST00000558787	ATP5EP2	Q5VTU8	51 aa		3.68	□□□□□ -1.82
MARK3-215	ENST00000558787	COX6B2	Q6YFQ2	88 aa		3.68	□□□□□ -1.82
MARK3-215	ENST00000558787		Q96NJ1	140 aa		3.68	□□□□□ -1.82
MARK3-215	ENST00000558787	SIGMAR1	Q99720	223 aa		3.68	□□□□□ -1.82
MARK3-215	ENST00000558787	BPY2	O14599	106 aa		3.67	□□□□□ -1.82
MARK3-215	ENST00000558787	IGKV4-1	P06312	121 aa		3.67	□□□□□ -1.82
MARK3-215	ENST00000558787	NDUFB1	O75438	58 aa		3.66	□□□□□ -1.82
MARK3-215	ENST00000558787	CXCL6	P80162	114 aa		3.66	□□□□□ -1.82
MARK3-215	ENST00000558787		Q75L30	129 aa		3.66	□□□□□ -1.82
MARK3-215	ENST00000558787	LINC00643	Q86TS7	51 aa		3.66	□□□□□ -1.82
MARK3-215	ENST00000558787		A8MWP4	228 aa		3.65	□□□□□ -1.83
MARK3-215	ENST00000558787	DEFB116	Q30KQ4	102 aa		3.64	□□□□□ -1.83
MARK3-215	ENST00000558787		A0A1B0GVX0	72 aa		3.63	□□□□□ -1.83
MARK3-215	ENST00000558787	KRTAP10-5	P60370	271 aa		3.63	□□□□□ -1.83
MARK3-215	ENST00000558787	C8orf87	E5RJ46	101 aa		3.62	□□□□□ -1.83
MARK3-215	ENST00000558787	DSCR10	P59022	87 aa		3.62	□□□□□ -1.83
MARK3-215	ENST00000558787	ATP11AUN	Q6ZP68	121 aa		3.62	□□□□□ -1.83
MARK3-215	ENST00000558787	PRR15	Q8IV56	129 aa		3.62	□□□□□ -1.83
MARK3-215	ENST00000558787	IGHV6-1	A0A0B4J1U7	121 aa		3.61	□□□□□ -1.83
MARK3-215	ENST00000558787	IGKV3D-7	A0A0C4DH55	119 aa		3.61	□□□□□ -1.83
MARK3-215	ENST00000558787		K7EQZ3	153 aa		3.61	□□□□□ -1.83
MARK3-215	ENST00000558787	LINC00313	P59037	77 aa		3.6	□□□□□ -1.83
MARK3-215	ENST00000558787		Q8N9L7	120 aa		3.59	□□□□□ -1.83
MARK3-215	ENST00000558787	C8orf17	Q9NRJ1	99 aa		3.59	□□□□□ -1.83
MARK3-215	ENST00000558787	HIST1H4A	P62805	103 aa	Known RBP	3.58	□□□□□ -1.84
MARK3-215	ENST00000558787	IMUP	Q9GZP8	106 aa		3.58	□□□□□ -1.84
MARK3-215	ENST00000558787	MMP24-AS1	A0A0U1RRL7	71 aa		3.57	□□□□□ -1.84
MARK3-215	ENST00000558787		A8MUU9	505 aa		3.57	□□□□□ -1.84
MARK3-215	ENST00000558787	HCG22	E2RYF7	251 aa		3.57	□□□□□ -1.84
MARK3-215	ENST00000558787	MT-ATP8	P03928	68 aa		3.57	□□□□□ -1.84
MARK3-215	ENST00000558787	C20orf166-AS1	Q96NR2	134 aa		3.57	□□□□□ -1.84
MARK3-215	ENST00000558787	hDV103S1	A0JD37	113 aa		3.56	□□□□□ -1.84
MARK3-215	ENST00000558787	CASC2	Q6XLA1	102 aa		3.56	□□□□□ -1.84
MARK3-215	ENST00000558787	TMEM254	Q8TBM7	123 aa		3.56	□□□□□ -1.84
MARK3-215	ENST00000558787	KRTAP16-1	A8MUX0	517 aa		3.55	□□□□□ -1.84
MARK3-215	ENST00000558787	KRTAP5-1	Q6L8H4	278 aa		3.55	□□□□□ -1.84
MARK3-215	ENST00000558787	NOTCH2NL	Q7Z3S9	236 aa		3.55	□□□□□ -1.84

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