RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 C3P01024 1663 aa0.05□□□□□ -2.4
GPHN-216ENST00000557678 ITPR1Q14643 2758 aa0.05□□□□□ -2.4
GPHN-216ENST00000557678 ERICH3Q5RHP9 1530 aa0.05□□□□□ -2.4
GPHN-216ENST00000557678 SPRR2AP35326 72 aa0.05□□□□□ -2.4
GPHN-216ENST00000557678 MYO18BQ8IUG5 2567 aa0.05□□□□□ -2.4
GPHN-216ENST00000557678 ACACAQ13085 2346 aa0.05□□□□□ -2.4
GPHN-216ENST00000557678 FAT2Q9NYQ8 4349 aa0.05□□□□□ -2.4
GPHN-216ENST00000557678 MROH1Q8NDA8 1641 aa0.05□□□□□ -2.4
GPHN-216ENST00000557678 SMIM27A0A1W2PRY6 76 aa0.04□□□□□ -2.4
GPHN-216ENST00000557678 RPS27P42677 84 aaKnown RBP0.04□□□□□ -2.4
GPHN-216ENST00000557678 RPS27LQ71UM5 84 aaKnown RBP0.04□□□□□ -2.4
GPHN-216ENST00000557678 LPAP08519 4548 aa0.04□□□□□ -2.4
GPHN-216ENST00000557678 CCDC168Q8NDH2 2452 aa0.04□□□□□ -2.4
GPHN-216ENST00000557678 SSPOA2VEC9 5147 aa0.03□□□□□ -2.4
GPHN-216ENST00000557678 USP9YO00507 2555 aaPredicted RBP0.03□□□□□ -2.4
GPHN-216ENST00000557678 USP9XQ93008 2570 aaPredicted RBP0.03□□□□□ -2.4
GPHN-216ENST00000557678 CPS1P31327 1500 aa0.03□□□□□ -2.4
GPHN-216ENST00000557678 DSTQ03001 7570 aaKnown RBP0.03□□□□□ -2.4
GPHN-216ENST00000557678 PLNP26678 52 aa0.03□□□□□ -2.4
GPHN-216ENST00000557678 LINC00308Q8TCZ7 52 aa0.03□□□□□ -2.4
GPHN-216ENST00000557678 ALMS1Q8TCU4 4167 aa0.03□□□□□ -2.41
GPHN-216ENST00000557678 EEA1Q15075 1411 aa0.03□□□□□ -2.41
GPHN-216ENST00000557678 HSPG2P98160 4391 aa0.03□□□□□ -2.41
GPHN-216ENST00000557678 ABCA10Q8WWZ4 1543 aa0.03□□□□□ -2.41
GPHN-216ENST00000557678 MADDQ8WXG6 1647 aa0.02□□□□□ -2.41
GPHN-216ENST00000557678 CCDC180Q9P1Z9 1646 aa0.02□□□□□ -2.41
GPHN-216ENST00000557678 IGLV5-48A0A075B6I7 105 aa0.02□□□□□ -2.41
GPHN-216ENST00000557678 MMP24-AS1A0A0U1RRL7 71 aa0.02□□□□□ -2.41
GPHN-216ENST00000557678 IGIPA6NJ69 53 aa0.02□□□□□ -2.41
GPHN-216ENST00000557678 CLASP1Q7Z460 1538 aa0.02□□□□□ -2.41
GPHN-216ENST00000557678 ABCA6Q8N139 1617 aa0.02□□□□□ -2.41
GPHN-216ENST00000557678 LRP2P98164 4655 aa0.01□□□□□ -2.41
GPHN-216ENST00000557678 DEFB110Q30KQ9 67 aa0.01□□□□□ -2.41
GPHN-216ENST00000557678 PKD1P98161 4303 aa0.01□□□□□ -2.41
GPHN-216ENST00000557678 ACACBO00763 2458 aa0□□□□□ -2.41
GPHN-216ENST00000557678 MT1AP04731 61 aa0□□□□□ -2.41
GPHN-216ENST00000557678 TNP1P09430 55 aa0□□□□□ -2.41
GPHN-216ENST00000557678 SPRR2EP22531 72 aa0□□□□□ -2.41
GPHN-216ENST00000557678 LAMA1P25391 3075 aa0□□□□□ -2.41
GPHN-216ENST00000557678 KIF1AQ12756 1690 aa0□□□□□ -2.41
GPHN-216ENST00000557678 KRTAP6-2Q3LI66 62 aa0□□□□□ -2.41
GPHN-216ENST00000557678 HMCN2Q8NDA2 5059 aa0□□□□□ -2.41
GPHN-216ENST00000557678 HECTD4Q9Y4D8 3996 aa0□□□□□ -2.41
GPHN-216ENST00000557678 TLN2Q9Y4G6 2542 aa0□□□□□ -2.41
GPHN-216ENST00000557678 FRYQ5TBA9 3013 aa-0□□□□□ -2.41
GPHN-216ENST00000557678 TEX15Q9BXT5 2789 aa-0□□□□□ -2.41
GPHN-216ENST00000557678 PKHD1P08F94 4074 aa-0.01□□□□□ -2.41
GPHN-216ENST00000557678 ITSN2Q9NZM3 1697 aa-0.01□□□□□ -2.41
GPHN-216ENST00000557678 GLI2P10070 1586 aa-0.01□□□□□ -2.41
GPHN-216ENST00000557678 TIAM1Q13009 1591 aa-0.01□□□□□ -2.41
GPHN-216ENST00000557678 PRXQ9BXM0 1461 aa-0.01□□□□□ -2.41
GPHN-216ENST00000557678 A8MTW9 85 aa-0.01□□□□□ -2.41
GPHN-216ENST00000557678 M0QZ58 72 aa-0.01□□□□□ -2.41
GPHN-216ENST00000557678 CMC2Q9NRP2 79 aa-0.01□□□□□ -2.41
GPHN-216ENST00000557678 KAAG1Q9UBP8 84 aa-0.01□□□□□ -2.41
GPHN-216ENST00000557678 ANKRD36CQ5JPF3 1778 aa-0.01□□□□□ -2.41
GPHN-216ENST00000557678 TOGARAM1Q9Y4F4 1720 aa-0.01□□□□□ -2.41
GPHN-216ENST00000557678 UGGT1Q9NYU2 1555 aa-0.02□□□□□ -2.41
GPHN-216ENST00000557678 M0QY20 66 aa-0.02□□□□□ -2.41
GPHN-216ENST00000557678 KRTAP6-1Q3LI64 71 aa-0.02□□□□□ -2.41
GPHN-216ENST00000557678 WFDC10BQ8IUB3 73 aa-0.02□□□□□ -2.41
GPHN-216ENST00000557678 ALS2Q96Q42 1657 aa-0.02□□□□□ -2.41
GPHN-216ENST00000557678 LRBAP50851 2863 aa-0.03□□□□□ -2.41
GPHN-216ENST00000557678 A0A0C4DFX4 3053 aa-0.03□□□□□ -2.41
GPHN-216ENST00000557678 LY75O60449 1722 aa-0.03□□□□□ -2.41
GPHN-216ENST00000557678 KRTAP19-7Q3SYF9 63 aa-0.03□□□□□ -2.41
GPHN-216ENST00000557678 CLPSL2Q6UWE3 100 aa-0.03□□□□□ -2.41
GPHN-216ENST00000557678 SPRR2FQ96RM1 72 aa-0.03□□□□□ -2.41
GPHN-216ENST00000557678 CROCC2H7BZ55 1655 aa-0.03□□□□□ -2.41
GPHN-216ENST00000557678 SPTAN1Q13813 2472 aaKnown RBP-0.03□□□□□ -2.41
GPHN-216ENST00000557678 FLGP20930 4061 aaPredicted RBP-0.03□□□□□ -2.41
GPHN-216ENST00000557678 CDC42BPAQ5VT25 1732 aa-0.04□□□□□ -2.42
GPHN-216ENST00000557678 COL12A1Q99715 3063 aa-0.04□□□□□ -2.42
GPHN-216ENST00000557678 ADCY10Q96PN6 1610 aa-0.04□□□□□ -2.42
GPHN-216ENST00000557678 SNRPGP15A8MWD9 76 aa-0.04□□□□□ -2.42
GPHN-216ENST00000557678 DEFB131AP59861 70 aa-0.04□□□□□ -2.42
GPHN-216ENST00000557678 LYSTQ99698 3801 aa-0.04□□□□□ -2.42
GPHN-216ENST00000557678 MAST1Q9Y2H9 1570 aa-0.04□□□□□ -2.42
GPHN-216ENST00000557678 EFCAB6Q5THR3 1501 aa-0.04□□□□□ -2.42
GPHN-216ENST00000557678 SVEP1Q4LDE5 3571 aa-0.04□□□□□ -2.42
GPHN-216ENST00000557678 LRP1BQ9NZR2 4599 aa-0.04□□□□□ -2.42
GPHN-216ENST00000557678 SMIM2Q9BVW6 85 aa-0.05□□□□□ -2.42
GPHN-216ENST00000557678 AKAP9Q99996 3911 aa-0.05□□□□□ -2.42
GPHN-216ENST00000557678 COL6A5A8TX70 2615 aa-0.05□□□□□ -2.42
GPHN-216ENST00000557678 SPART-AS1P0CW21 52 aa-0.06□□□□□ -2.42
GPHN-216ENST00000557678 C5orf42Q9H799 3197 aa-0.06□□□□□ -2.42
GPHN-216ENST00000557678 PCLOQ9Y6V0 5065 aa-0.06□□□□□ -2.42
GPHN-216ENST00000557678 MYO9AB2RTY4 2548 aa-0.06□□□□□ -2.42
GPHN-216ENST00000557678 DNAH9Q9NYC9 4486 aa-0.07□□□□□ -2.42
GPHN-216ENST00000557678 NBPF19A0A087WUL8 3843 aa-0.07□□□□□ -2.42
GPHN-216ENST00000557678 SYCP2Q9BX26 1530 aa-0.07□□□□□ -2.42
GPHN-216ENST00000557678 CEP295Q9C0D2 2601 aa-0.07□□□□□ -2.42
GPHN-216ENST00000557678 MUC12Q9UKN1 5478 aa-0.07□□□□□ -2.42
GPHN-216ENST00000557678 DEFB1P60022 68 aa-0.07□□□□□ -2.42
GPHN-216ENST00000557678 KRTAP19-8Q3LI54 63 aa-0.07□□□□□ -2.42
GPHN-216ENST00000557678 CFAP46Q8IYW2 2715 aa-0.07□□□□□ -2.42
GPHN-216ENST00000557678 A0A1B0GUL6 1792 aa-0.07□□□□□ -2.42
GPHN-216ENST00000557678 DOPEY1Q5JWR5 2465 aa-0.07□□□□□ -2.42
GPHN-216ENST00000557678 ABCC8Q09428 1581 aa-0.07□□□□□ -2.42
GPHN-216ENST00000557678 DNAH6Q9C0G6 4158 aa-0.07□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms