RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 EPRSP07814 1512 aaKnown RBP-0.69□□□□□ -2.52
FOXN3-216ENST00000557496 RICTORQ6R327 1708 aa-0.69□□□□□ -2.52
FOXN3-216ENST00000557496 VPS13CQ709C8 3753 aa-0.7□□□□□ -2.52
FOXN3-216ENST00000557496 CLPSL2Q6UWE3 100 aa-0.7□□□□□ -2.52
FOXN3-216ENST00000557496 DPY30Q9C005 99 aa-0.7□□□□□ -2.52
FOXN3-216ENST00000557496 PRUNE2Q8WUY3 3088 aa-0.7□□□□□ -2.52
FOXN3-216ENST00000557496 ZFHX4Q86UP3 3567 aa-0.7□□□□□ -2.52
FOXN3-216ENST00000557496 PLIN4Q96Q06 1357 aa-0.7□□□□□ -2.52
FOXN3-216ENST00000557496 CNTLNQ9NXG0 1405 aa-0.71□□□□□ -2.52
FOXN3-216ENST00000557496 IGLV5-48A0A075B6I7 105 aa-0.71□□□□□ -2.52
FOXN3-216ENST00000557496 MYMXA0A1B0GTQ4 84 aa-0.71□□□□□ -2.52
FOXN3-216ENST00000557496 TNP1P09430 55 aa-0.71□□□□□ -2.52
FOXN3-216ENST00000557496 RPS27P42677 84 aaKnown RBP-0.71□□□□□ -2.52
FOXN3-216ENST00000557496 RPS27LQ71UM5 84 aaKnown RBP-0.71□□□□□ -2.52
FOXN3-216ENST00000557496 FREM2Q5SZK8 3169 aa-0.71□□□□□ -2.52
FOXN3-216ENST00000557496 MYO15AQ9UKN7 3530 aa-0.71□□□□□ -2.52
FOXN3-216ENST00000557496 BOD1L1Q8NFC6 3051 aa-0.71□□□□□ -2.52
FOXN3-216ENST00000557496 PIK3C2BO00750 1634 aa-0.71□□□□□ -2.52
FOXN3-216ENST00000557496 KIF1AQ12756 1690 aa-0.72□□□□□ -2.52
FOXN3-216ENST00000557496 ABCC10Q5T3U5 1492 aa-0.72□□□□□ -2.52
FOXN3-216ENST00000557496 MMP24-AS1A0A0U1RRL7 71 aa-0.72□□□□□ -2.52
FOXN3-216ENST00000557496 NDUFA4O00483 81 aa-0.72□□□□□ -2.52
FOXN3-216ENST00000557496 CYB5AP00167 134 aa-0.72□□□□□ -2.52
FOXN3-216ENST00000557496 LINC00032P0C843 101 aa-0.72□□□□□ -2.52
FOXN3-216ENST00000557496 RBP2P50120 134 aa-0.72□□□□□ -2.52
FOXN3-216ENST00000557496 CRIP1P50238 77 aa-0.72□□□□□ -2.52
FOXN3-216ENST00000557496 WT1-ASQ06250 92 aa-0.72□□□□□ -2.52
FOXN3-216ENST00000557496 PEA15Q15121 130 aa-0.72□□□□□ -2.52
FOXN3-216ENST00000557496 NCBP2-AS2Q69YL0 99 aa-0.72□□□□□ -2.52
FOXN3-216ENST00000557496 MT1MQ8N339 61 aa-0.72□□□□□ -2.52
FOXN3-216ENST00000557496 SNHG12Q9BXW3 62 aa-0.72□□□□□ -2.52
FOXN3-216ENST00000557496 CDC42BPGQ6DT37 1551 aa-0.72□□□□□ -2.52
FOXN3-216ENST00000557496 RNF17Q9BXT8 1623 aaKnown RBP-0.72□□□□□ -2.52
FOXN3-216ENST00000557496 CFAP43Q8NDM7 1665 aa-0.72□□□□□ -2.53
FOXN3-216ENST00000557496 NRAPQ86VF7 1730 aa-0.72□□□□□ -2.53
FOXN3-216ENST00000557496 CEP162Q5TB80 1403 aa-0.72□□□□□ -2.53
FOXN3-216ENST00000557496 PPLO60437 1756 aa-0.73□□□□□ -2.53
FOXN3-216ENST00000557496 MAST1Q9Y2H9 1570 aa-0.73□□□□□ -2.53
FOXN3-216ENST00000557496 CEBPZOSA8MTT3 80 aa-0.73□□□□□ -2.53
FOXN3-216ENST00000557496 UMAD1C9J7I0 102 aa-0.73□□□□□ -2.53
FOXN3-216ENST00000557496 MT2AP02795 61 aa-0.73□□□□□ -2.53
FOXN3-216ENST00000557496 S100PP25815 95 aa-0.73□□□□□ -2.53
FOXN3-216ENST00000557496 LRRIQ1Q96JM4 1722 aa-0.74□□□□□ -2.53
FOXN3-216ENST00000557496 MT1BP07438 61 aa-0.74□□□□□ -2.53
FOXN3-216ENST00000557496 HMGA1P17096 107 aaKnown RBP-0.74□□□□□ -2.53
FOXN3-216ENST00000557496 IFI27P40305 119 aaPredicted RBP-0.74□□□□□ -2.53
FOXN3-216ENST00000557496 NREPQ16612 68 aa-0.74□□□□□ -2.53
FOXN3-216ENST00000557496 RABAC1Q9UI14 185 aa-0.74□□□□□ -2.53
FOXN3-216ENST00000557496 URB2Q14146 1524 aaKnown RBP-0.74□□□□□ -2.53
FOXN3-216ENST00000557496 ASXL1Q8IXJ9 1541 aa-0.74□□□□□ -2.53
FOXN3-216ENST00000557496 KIAA0586Q9BVV6 1533 aa-0.74□□□□□ -2.53
FOXN3-216ENST00000557496 A0A1B0GUL6 1792 aa-0.75□□□□□ -2.53
FOXN3-216ENST00000557496 DEFB131BA0A096LNP1 70 aa-0.75□□□□□ -2.53
FOXN3-216ENST00000557496 M0R143 59 aa-0.75□□□□□ -2.53
FOXN3-216ENST00000557496 NDUFB1O75438 58 aa-0.75□□□□□ -2.53
FOXN3-216ENST00000557496 GYPAP02724 150 aa-0.75□□□□□ -2.53
FOXN3-216ENST00000557496 SFTA3P0C7M3 94 aa-0.75□□□□□ -2.53
FOXN3-216ENST00000557496 SMIM11AP58511 58 aa-0.75□□□□□ -2.53
FOXN3-216ENST00000557496 SARNPP82979 210 aaKnown RBP-0.75□□□□□ -2.53
FOXN3-216ENST00000557496 TDRG1Q3Y452 100 aa-0.75□□□□□ -2.53
FOXN3-216ENST00000557496 ACBD7Q8N6N7 88 aa-0.75□□□□□ -2.53
FOXN3-216ENST00000557496 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.75□□□□□ -2.53
FOXN3-216ENST00000557496 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.75□□□□□ -2.53
FOXN3-216ENST00000557496 KIF14Q15058 1648 aa-0.75□□□□□ -2.53
FOXN3-216ENST00000557496 SNRPFP62306 86 aaKnown RBP-0.76□□□□□ -2.53
FOXN3-216ENST00000557496 LINC00643Q86TS7 51 aa-0.76□□□□□ -2.53
FOXN3-216ENST00000557496 CCNB3Q8WWL7 1395 aa-0.76□□□□□ -2.53
FOXN3-216ENST00000557496 ARHGAP35Q9NRY4 1499 aa-0.76□□□□□ -2.53
FOXN3-216ENST00000557496 SMARCA2P51531 1590 aa-0.76□□□□□ -2.53
FOXN3-216ENST00000557496 WDFY3Q8IZQ1 3526 aa-0.76□□□□□ -2.53
FOXN3-216ENST00000557496 FRYLO94915 3013 aa-0.77□□□□□ -2.53
FOXN3-216ENST00000557496 CENPEQ02224 2701 aa-0.77□□□□□ -2.53
FOXN3-216ENST00000557496 MYO5CQ9NQX4 1742 aa-0.77□□□□□ -2.53
FOXN3-216ENST00000557496 NHSQ6T4R5 1651 aa-0.77□□□□□ -2.53
FOXN3-216ENST00000557496 CCDC88BA6NC98 1476 aa-0.77□□□□□ -2.53
FOXN3-216ENST00000557496 PYY3Q5JQD4 70 aa-0.77□□□□□ -2.53
FOXN3-216ENST00000557496 MINOS1Q5TGZ0 78 aa-0.77□□□□□ -2.53
FOXN3-216ENST00000557496 S100A16Q96FQ6 103 aaKnown RBP-0.77□□□□□ -2.53
FOXN3-216ENST00000557496 TCEAL7Q9BRU2 100 aa-0.77□□□□□ -2.53
FOXN3-216ENST00000557496 KCNQ1DNQ9H478 68 aa-0.77□□□□□ -2.53
FOXN3-216ENST00000557496 MAP3K4Q9Y6R4 1608 aa-0.78□□□□□ -2.53
FOXN3-216ENST00000557496 INO80Q9ULG1 1556 aaPredicted RBP-0.78□□□□□ -2.53
FOXN3-216ENST00000557496 DEFB4AO15263 64 aa-0.78□□□□□ -2.53
FOXN3-216ENST00000557496 SMIM13P0DJ93 91 aa-0.78□□□□□ -2.53
FOXN3-216ENST00000557496 PKIAP61925 76 aa-0.78□□□□□ -2.53
FOXN3-216ENST00000557496 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.78□□□□□ -2.54
FOXN3-216ENST00000557496 CD163L1Q9NR16 1453 aa-0.79□□□□□ -2.54
FOXN3-216ENST00000557496 DMDP11532 3685 aa-0.79□□□□□ -2.54
FOXN3-216ENST00000557496 DEFB121Q5J5C9 76 aa-0.79□□□□□ -2.54
FOXN3-216ENST00000557496 ENHOQ6UWT2 76 aa-0.79□□□□□ -2.54
FOXN3-216ENST00000557496 C6orf48Q9UBA6 75 aa-0.79□□□□□ -2.54
FOXN3-216ENST00000557496 TTC37Q6PGP7 1564 aa-0.79□□□□□ -2.54
FOXN3-216ENST00000557496 THOC2Q8NI27 1593 aaKnown RBP-0.79□□□□□ -2.54
FOXN3-216ENST00000557496 PEG3Q9GZU2 1588 aa-0.79□□□□□ -2.54
FOXN3-216ENST00000557496 PCNTO95613 3336 aa-0.79□□□□□ -2.54
FOXN3-216ENST00000557496 VPS8Q8N3P4 1428 aa-0.8□□□□□ -2.54
FOXN3-216ENST00000557496 A0A087WXM4 84 aa-0.8□□□□□ -2.54
FOXN3-216ENST00000557496 FCER1GP30273 86 aa-0.8□□□□□ -2.54
FOXN3-216ENST00000557496 BVES-AS1Q5T3Y7 98 aa-0.8□□□□□ -2.54
FOXN3-216ENST00000557496 ABCC3O15438 1527 aa-0.8□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms