RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.18□□□□□ -1.9
TMEM260-210ENST00000556422 IGLV5-52A0A0A0MRZ9 124 aa3.18□□□□□ -1.9
TMEM260-210ENST00000556422 H3BPC8 53 aa3.18□□□□□ -1.9
TMEM260-210ENST00000556422 H3BQ85 93 aa3.18□□□□□ -1.9
TMEM260-210ENST00000556422 P0C880 135 aa3.18□□□□□ -1.9
TMEM260-210ENST00000556422 ST20-AS1Q8NBB2 130 aa3.18□□□□□ -1.9
TMEM260-210ENST00000556422 IGLV8-61A0A075B6I0 122 aa3.17□□□□□ -1.9
TMEM260-210ENST00000556422 IGLV1-50A0A075B6I6 118 aa3.17□□□□□ -1.9
TMEM260-210ENST00000556422 SPRR1AP35321 89 aa3.17□□□□□ -1.9
TMEM260-210ENST00000556422 ZCCHC13Q8WW36 166 aaKnown RBP3.17□□□□□ -1.9
TMEM260-210ENST00000556422 KRTAP25-1Q3LHN0 102 aa3.17□□□□□ -1.9
TMEM260-210ENST00000556422 A0A1B0GU69 56 aa3.16□□□□□ -1.9
TMEM260-210ENST00000556422 CNBPP62633 177 aaKnown RBP3.16□□□□□ -1.9
TMEM260-210ENST00000556422 Q6ZRX8 168 aa3.16□□□□□ -1.9
TMEM260-210ENST00000556422 DNAH6Q9C0G6 4158 aa3.15□□□□□ -1.9
TMEM260-210ENST00000556422 A0A096LNI7 61 aa3.15□□□□□ -1.9
TMEM260-210ENST00000556422 UQCR11O14957 56 aa3.15□□□□□ -1.9
TMEM260-210ENST00000556422 WWC2-AS2Q96NR7 200 aa3.15□□□□□ -1.9
TMEM260-210ENST00000556422 Q6ZRN7 208 aaPredicted RBP3.15□□□□□ -1.91
TMEM260-210ENST00000556422 Q8N377 158 aa3.15□□□□□ -1.91
TMEM260-210ENST00000556422 DMAC1Q96GE9 116 aa3.15□□□□□ -1.91
TMEM260-210ENST00000556422 UBE2DNLQ8IWF7 75 aa3.14□□□□□ -1.91
TMEM260-210ENST00000556422 DNAH8Q96JB1 4490 aa3.14□□□□□ -1.91
TMEM260-210ENST00000556422 DNAH17Q9UFH2 4485 aa3.14□□□□□ -1.91
TMEM260-210ENST00000556422 A0A1W2PNN7 141 aa3.14□□□□□ -1.91
TMEM260-210ENST00000556422 NBDYA0A0U1RRE5 68 aa3.13□□□□□ -1.91
TMEM260-210ENST00000556422 NUPR2A6NF83 97 aa3.13□□□□□ -1.91
TMEM260-210ENST00000556422 KRTAP11-1Q8IUC1 163 aa3.13□□□□□ -1.91
TMEM260-210ENST00000556422 IGKV2-24A0A0C4DH68 120 aa3.13□□□□□ -1.91
TMEM260-210ENST00000556422 WFDC13Q8IUB5 93 aa3.13□□□□□ -1.91
TMEM260-210ENST00000556422 IGLV5-48A0A075B6I7 105 aa3.12□□□□□ -1.91
TMEM260-210ENST00000556422 LCE6AA0A183 80 aa3.12□□□□□ -1.91
TMEM260-210ENST00000556422 SSBP3-AS1Q7Z2R9 100 aa3.12□□□□□ -1.91
TMEM260-210ENST00000556422 HYDINQ4G0P3 5121 aa3.12□□□□□ -1.91
TMEM260-210ENST00000556422 DEFB116Q30KQ4 102 aa3.12□□□□□ -1.91
TMEM260-210ENST00000556422 CAMK2N1Q7Z7J9 78 aa3.12□□□□□ -1.91
TMEM260-210ENST00000556422 DEFB105AQ8NG35 78 aa3.12□□□□□ -1.91
TMEM260-210ENST00000556422 DNAH5Q8TE73 4624 aa3.11□□□□□ -1.91
TMEM260-210ENST00000556422 PANO1I0J062 215 aa3.11□□□□□ -1.91
TMEM260-210ENST00000556422 PCOTHQ58A44 107 aa3.11□□□□□ -1.91
TMEM260-210ENST00000556422 A8MUU9 505 aa3.11□□□□□ -1.91
TMEM260-210ENST00000556422 C9orf163Q8N9P6 203 aa3.11□□□□□ -1.91
TMEM260-210ENST00000556422 C1orf137Q5JT78 98 aa3.1□□□□□ -1.91
TMEM260-210ENST00000556422 PRLHP81277 87 aa3.1□□□□□ -1.91
TMEM260-210ENST00000556422 DNAH11Q96DT5 4516 aa3.1□□□□□ -1.91
TMEM260-210ENST00000556422 C14orf177Q52M58 125 aa3.1□□□□□ -1.91
TMEM260-210ENST00000556422 ALMS1Q8TCU4 4167 aa3.09□□□□□ -1.91
TMEM260-210ENST00000556422 FAT2Q9NYQ8 4349 aa3.09□□□□□ -1.91
TMEM260-210ENST00000556422 Q8NBF4 154 aa3.09□□□□□ -1.91
TMEM260-210ENST00000556422 PKD1P98161 4303 aa3.09□□□□□ -1.91
TMEM260-210ENST00000556422 SPATA8Q6RVD6 105 aa3.09□□□□□ -1.92
TMEM260-210ENST00000556422 FLG2Q5D862 2391 aaPredicted RBP3.08□□□□□ -1.92
TMEM260-210ENST00000556422 A0A1B0GVX0 72 aa3.08□□□□□ -1.92
TMEM260-210ENST00000556422 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.08□□□□□ -1.92
TMEM260-210ENST00000556422 IGLV7-46A0A075B6I9 117 aa3.07□□□□□ -1.92
TMEM260-210ENST00000556422 A0A087WTM6 91 aa3.07□□□□□ -1.92
TMEM260-210ENST00000556422 A0A0G2JQZ4 141 aa3.07□□□□□ -1.92
TMEM260-210ENST00000556422 SPRR4Q96PI1 79 aa3.07□□□□□ -1.92
TMEM260-210ENST00000556422 PLAC8Q9NZF1 115 aa3.07□□□□□ -1.92
TMEM260-210ENST00000556422 KRTAP13-1Q8IUC0 172 aa3.07□□□□□ -1.92
TMEM260-210ENST00000556422 SPACA4Q8TDM5 124 aa3.07□□□□□ -1.92
TMEM260-210ENST00000556422 ZNF861PO60384 105 aa3.06□□□□□ -1.92
TMEM260-210ENST00000556422 PKHD1P08F94 4074 aa3.06□□□□□ -1.92
TMEM260-210ENST00000556422 IGFL1Q6UW32 110 aa3.05□□□□□ -1.92
TMEM260-210ENST00000556422 CRIPTQ9P021 101 aa3.05□□□□□ -1.92
TMEM260-210ENST00000556422 A0A087WSZ3 146 aa3.04□□□□□ -1.92
TMEM260-210ENST00000556422 K7EQZ3 153 aa3.04□□□□□ -1.92
TMEM260-210ENST00000556422 SPRR1BP22528 89 aa3.04□□□□□ -1.92
TMEM260-210ENST00000556422 LRP1BQ9NZR2 4599 aa3.03□□□□□ -1.92
TMEM260-210ENST00000556422 VPS13BQ7Z7G8 4022 aa3.03□□□□□ -1.92
TMEM260-210ENST00000556422 ACYP2P14621 99 aa3.03□□□□□ -1.92
TMEM260-210ENST00000556422 SACSQ9NZJ4 4579 aa3.03□□□□□ -1.92
TMEM260-210ENST00000556422 DSCR10P59022 87 aa3.03□□□□□ -1.92
TMEM260-210ENST00000556422 Q5W150 140 aa3.02□□□□□ -1.93
TMEM260-210ENST00000556422 HRES1P13985 223 aa3.01□□□□□ -1.93
TMEM260-210ENST00000556422 PSORS1C2Q9UIG4 136 aa3.01□□□□□ -1.93
TMEM260-210ENST00000556422 LY6G6CO95867 125 aa3.01□□□□□ -1.93
TMEM260-210ENST00000556422 KRTAP10-2P60368 255 aa3□□□□□ -1.93
TMEM260-210ENST00000556422 LINC00304Q8N9R0 145 aa2.98□□□□□ -1.93
TMEM260-210ENST00000556422 LINC00472Q9H8W2 130 aa2.98□□□□□ -1.93
TMEM260-210ENST00000556422 IGLV7-43P04211 117 aa2.97□□□□□ -1.93
TMEM260-210ENST00000556422 RPL37AP61513 92 aaKnown RBP2.97□□□□□ -1.93
TMEM260-210ENST00000556422 ANAPC11Q9NYG5 84 aa2.97□□□□□ -1.93
TMEM260-210ENST00000556422 Q96NJ1 140 aa2.96□□□□□ -1.93
TMEM260-210ENST00000556422 KMT2CQ8NEZ4 4911 aaKnown RBP2.96□□□□□ -1.93
TMEM260-210ENST00000556422 Q6ZSA8 131 aa2.96□□□□□ -1.94
TMEM260-210ENST00000556422 KRTAP29-1A8MX34 341 aaPredicted RBP2.95□□□□□ -1.94
TMEM260-210ENST00000556422 KRTAP10-1P60331 282 aa2.95□□□□□ -1.94
TMEM260-210ENST00000556422 KRTAP23-1A1A580 65 aa2.93□□□□□ -1.94
TMEM260-210ENST00000556422 DYNC1H1Q14204 4646 aaKnown RBP2.93□□□□□ -1.94
TMEM260-210ENST00000556422 RYR2Q92736 4967 aa2.93□□□□□ -1.94
TMEM260-210ENST00000556422 APOBP04114 4563 aaKnown RBP2.92□□□□□ -1.94
TMEM260-210ENST00000556422 MMP24-AS1A0A0U1RRL7 71 aa2.92□□□□□ -1.94
TMEM260-210ENST00000556422 KRTAP15-1Q3LI76 137 aa2.92□□□□□ -1.94
TMEM260-210ENST00000556422 TP53AIP1Q9HCN2 124 aa2.92□□□□□ -1.94
TMEM260-210ENST00000556422 FAT1Q14517 4588 aa2.91□□□□□ -1.94
TMEM260-210ENST00000556422 KRTAP1-4P0C5Y4 121 aa2.9□□□□□ -1.95
TMEM260-210ENST00000556422 KRTAP13-2Q52LG2 175 aa2.9□□□□□ -1.95
TMEM260-210ENST00000556422 PKHD1L1Q86WI1 4243 aa2.88□□□□□ -1.95
TMEM260-210ENST00000556422 TYMSOSQ8TAI1 123 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms