RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 HSD52Q0P140 79 aa5.36□□□□□ -1.55
SYNE2-221ENST00000556342 KRTAP10-10P60014 251 aa5.35□□□□□ -1.55
SYNE2-221ENST00000556342 SS18L2Q9UHA2 77 aa5.35□□□□□ -1.55
SYNE2-221ENST00000556342 FAM236DA0A1B0GTK5 79 aa5.34□□□□□ -1.55
SYNE2-221ENST00000556342 H3BUT2 72 aa5.34□□□□□ -1.55
SYNE2-221ENST00000556342 FAM236CP0DP71 79 aa5.34□□□□□ -1.55
SYNE2-221ENST00000556342 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.34□□□□□ -1.55
SYNE2-221ENST00000556342 PPDPFLQ8WWR9 84 aa5.34□□□□□ -1.55
SYNE2-221ENST00000556342 UBE2V1Q13404 147 aa5.33□□□□□ -1.56
SYNE2-221ENST00000556342 KRTAP16-1A8MUX0 517 aa5.31□□□□□ -1.56
SYNE2-221ENST00000556342 FXYD2P54710 66 aa5.31□□□□□ -1.56
SYNE2-221ENST00000556342 DSCR10P59022 87 aa5.31□□□□□ -1.56
SYNE2-221ENST00000556342 CEND1Q8N111 149 aa5.3□□□□□ -1.56
SYNE2-221ENST00000556342 HRES1P13985 223 aa5.29□□□□□ -1.56
SYNE2-221ENST00000556342 TEN1Q86WV5 123 aa5.29□□□□□ -1.56
SYNE2-221ENST00000556342 RBM12B-AS1Q9P1G2 102 aa5.29□□□□□ -1.56
SYNE2-221ENST00000556342 A0A087WSZ3 146 aa5.28□□□□□ -1.56
SYNE2-221ENST00000556342 LINC00846Q9NV44 126 aa5.28□□□□□ -1.56
SYNE2-221ENST00000556342 KRTAP19-6Q3LI70 58 aa5.27□□□□□ -1.57
SYNE2-221ENST00000556342 A0A1W2PPM0 123 aa5.25□□□□□ -1.57
SYNE2-221ENST00000556342 K7EP34 96 aa5.25□□□□□ -1.57
SYNE2-221ENST00000556342 SIGMAR1Q99720 223 aa5.25□□□□□ -1.57
SYNE2-221ENST00000556342 NDUFV3P56181 108 aaKnown RBP5.24□□□□□ -1.57
SYNE2-221ENST00000556342 LINC00313P59037 77 aa5.24□□□□□ -1.57
SYNE2-221ENST00000556342 K7ERJ3 54 aa5.23□□□□□ -1.57
SYNE2-221ENST00000556342 PCP4P48539 62 aa5.23□□□□□ -1.57
SYNE2-221ENST00000556342 NOTCH2NLQ7Z3S9 236 aa5.23□□□□□ -1.57
SYNE2-221ENST00000556342 HIST1H4GQ99525 98 aa5.22□□□□□ -1.57
SYNE2-221ENST00000556342 NAA38Q9BRA0 125 aaKnown RBP5.22□□□□□ -1.57
SYNE2-221ENST00000556342 SVIPQ8NHG7 77 aa5.21□□□□□ -1.58
SYNE2-221ENST00000556342 RAB37Q96AX2 223 aa5.21□□□□□ -1.58
SYNE2-221ENST00000556342 H3BMG7 143 aa5.2□□□□□ -1.58
SYNE2-221ENST00000556342 IGKV4-1P06312 121 aa5.2□□□□□ -1.58
SYNE2-221ENST00000556342 MT3P25713 68 aa5.2□□□□□ -1.58
SYNE2-221ENST00000556342 KRTAP6-3Q3LI67 103 aa5.2□□□□□ -1.58
SYNE2-221ENST00000556342 GTF2H5Q6ZYL4 71 aa5.2□□□□□ -1.58
SYNE2-221ENST00000556342 PRO0461Q9UI25 63 aa5.2□□□□□ -1.58
SYNE2-221ENST00000556342 A0A1W2PNM2 257 aa5.19□□□□□ -1.58
SYNE2-221ENST00000556342 SNCGO76070 127 aa5.19□□□□□ -1.58
SYNE2-221ENST00000556342 FABP2P12104 132 aa5.19□□□□□ -1.58
SYNE2-221ENST00000556342 KRTAP10-7P60409 375 aaPredicted RBP5.19□□□□□ -1.58
SYNE2-221ENST00000556342 FAM218AQ96MZ4 157 aa5.19□□□□□ -1.58
SYNE2-221ENST00000556342 SPCS1Q9Y6A9 102 aa5.19□□□□□ -1.58
SYNE2-221ENST00000556342 MTURNQ8N3F0 131 aa5.18□□□□□ -1.58
SYNE2-221ENST00000556342 A0A0B4J2C4 111 aa5.17□□□□□ -1.58
SYNE2-221ENST00000556342 H0YGX0 51 aa5.17□□□□□ -1.58
SYNE2-221ENST00000556342 IGHV6-1A0A0B4J1U7 121 aa5.14□□□□□ -1.59
SYNE2-221ENST00000556342 A8MWP4 228 aa5.14□□□□□ -1.59
SYNE2-221ENST00000556342 F8W1H4 67 aa5.14□□□□□ -1.59
SYNE2-221ENST00000556342 DEFB116Q30KQ4 102 aa5.14□□□□□ -1.59
SYNE2-221ENST00000556342 TRBV7-4A0A0J9YYF1 115 aa5.13□□□□□ -1.59
SYNE2-221ENST00000556342 LINC00472Q9H8W2 130 aa5.13□□□□□ -1.59
SYNE2-221ENST00000556342 PRO1854Q9UHT4 67 aa5.13□□□□□ -1.59
SYNE2-221ENST00000556342 NEBP20929 6669 aa5.13□□□□□ -1.59
SYNE2-221ENST00000556342 A0A0A0MQY5 61 aa5.12□□□□□ -1.59
SYNE2-221ENST00000556342 A0A1B0GX51 115 aa5.12□□□□□ -1.59
SYNE2-221ENST00000556342 SPINK7P58062 85 aa5.12□□□□□ -1.59
SYNE2-221ENST00000556342 ANKRD29Q8N6D5 301 aa5.12□□□□□ -1.59
SYNE2-221ENST00000556342 ZCCHC13Q8WW36 166 aaKnown RBP5.11□□□□□ -1.59
SYNE2-221ENST00000556342 K7ERU9 68 aa5.1□□□□□ -1.59
SYNE2-221ENST00000556342 A0A1B0GV72 72 aa5.09□□□□□ -1.59
SYNE2-221ENST00000556342 C8orf87E5RJ46 101 aa5.09□□□□□ -1.59
SYNE2-221ENST00000556342 A0A1B0GVX0 72 aa5.08□□□□□ -1.6
SYNE2-221ENST00000556342 TRACP01848 142 aa5.08□□□□□ -1.6
SYNE2-221ENST00000556342 LYRM7Q5U5X0 104 aa5.08□□□□□ -1.6
SYNE2-221ENST00000556342 CCKP06307 115 aa5.07□□□□□ -1.6
SYNE2-221ENST00000556342 WFDC13Q8IUB5 93 aa5.07□□□□□ -1.6
SYNE2-221ENST00000556342 PSMB2P49721 201 aa5.06□□□□□ -1.6
SYNE2-221ENST00000556342 ETDBQ3ZM63 59 aa5.06□□□□□ -1.6
SYNE2-221ENST00000556342 KRTAP5-11Q6L8G4 156 aa5.05□□□□□ -1.6
SYNE2-221ENST00000556342 ORMDL1Q9P0S3 153 aa5.05□□□□□ -1.6
SYNE2-221ENST00000556342 DNAL4O96015 105 aa5.04□□□□□ -1.6
SYNE2-221ENST00000556342 MUC12Q9UKN1 5478 aa5.03□□□□□ -1.6
SYNE2-221ENST00000556342 H3BQ85 93 aa5.03□□□□□ -1.6
SYNE2-221ENST00000556342 ATXN8Q156A1 80 aa5.02□□□□□ -1.61
SYNE2-221ENST00000556342 LCE1EQ5T753 118 aa5.02□□□□□ -1.61
SYNE2-221ENST00000556342 TMEM256-PLSCR3K7ERE1 68 aa5.01□□□□□ -1.61
SYNE2-221ENST00000556342 SCGB1C2P0DMR2 95 aa5.01□□□□□ -1.61
SYNE2-221ENST00000556342 VPS25Q9BRG1 176 aa5.01□□□□□ -1.61
SYNE2-221ENST00000556342 C9JAW5 83 aa5□□□□□ -1.61
SYNE2-221ENST00000556342 H3BT86 120 aa5□□□□□ -1.61
SYNE2-221ENST00000556342 J3KT08 172 aa4.99□□□□□ -1.61
SYNE2-221ENST00000556342 J3QR89 54 aa4.98□□□□□ -1.61
SYNE2-221ENST00000556342 COX6CP09669 75 aa4.98□□□□□ -1.61
SYNE2-221ENST00000556342 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.98□□□□□ -1.61
SYNE2-221ENST00000556342 H1FX-AS1Q4G0G2 97 aa4.96□□□□□ -1.62
SYNE2-221ENST00000556342 NDUFB1O75438 58 aa4.95□□□□□ -1.62
SYNE2-221ENST00000556342 SCGB1A1P11684 91 aa4.95□□□□□ -1.62
SYNE2-221ENST00000556342 C8orf17Q9NRJ1 99 aa4.95□□□□□ -1.62
SYNE2-221ENST00000556342 RBM3P98179 157 aaKnown RBP4.94□□□□□ -1.62
SYNE2-221ENST00000556342 KRTAP20-1Q3LI63 56 aa4.94□□□□□ -1.62
SYNE2-221ENST00000556342 DSCR8Q96T75 97 aa4.94□□□□□ -1.62
SYNE2-221ENST00000556342 IGKV3D-7A0A0C4DH55 119 aa4.93□□□□□ -1.62
SYNE2-221ENST00000556342 Q6ZQT0 140 aa4.93□□□□□ -1.62
SYNE2-221ENST00000556342 FAM240AA0A1B0GVK7 77 aa4.92□□□□□ -1.62
SYNE2-221ENST00000556342 A6NN06 94 aa4.92□□□□□ -1.62
SYNE2-221ENST00000556342 Q6ZVQ6 151 aa4.91□□□□□ -1.62
SYNE2-221ENST00000556342 MT-ATP8P03928 68 aa4.9□□□□□ -1.63
SYNE2-221ENST00000556342 MDN1Q9NU22 5596 aa4.89□□□□□ -1.63
SYNE2-221ENST00000556342 BAALC-AS2P0C853 105 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms