RNA–Protein interactions for RNA: ENST00000555548.1

PAX3-210, Transcript of paired box 3, humanhuman

TSL 4

Gene PAX3, Length 458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-210ENST00000555548 LINC00959A0A1B0GUT2 108 aa3.51□□□□□ -1.85
PAX3-210ENST00000555548 DEFB131AP59861 70 aa3.51□□□□□ -1.85
PAX3-210ENST00000555548 ELOF1P60002 83 aaKnown RBP3.51□□□□□ -1.85
PAX3-210ENST00000555548 LCA10Q71F78 164 aa3.51□□□□□ -1.85
PAX3-210ENST00000555548 CSMD3Q7Z407 3707 aa3.51□□□□□ -1.85
PAX3-210ENST00000555548 PCLOQ9Y6V0 5065 aa3.51□□□□□ -1.85
PAX3-210ENST00000555548 hDV103S1A0JD37 113 aa3.5□□□□□ -1.85
PAX3-210ENST00000555548 KRTAP10-7P60409 375 aaPredicted RBP3.5□□□□□ -1.85
PAX3-210ENST00000555548 C10orf99Q6UWK7 81 aa3.5□□□□□ -1.85
PAX3-210ENST00000555548 LINC00304Q8N9R0 145 aa3.5□□□□□ -1.85
PAX3-210ENST00000555548 STARD9Q9P2P6 4700 aa3.5□□□□□ -1.85
PAX3-210ENST00000555548 PLECQ15149 4684 aaKnown RBP3.5□□□□□ -1.85
PAX3-210ENST00000555548 FRAS1Q86XX4 4008 aa3.49□□□□□ -1.85
PAX3-210ENST00000555548 TRGV1A0A0A0MS02 117 aa3.49□□□□□ -1.85
PAX3-210ENST00000555548 ZNF73O43830 326 aaPredicted RBP3.49□□□□□ -1.85
PAX3-210ENST00000555548 Q6ZTI0 123 aa3.49□□□□□ -1.85
PAX3-210ENST00000555548 Q8NDZ9 215 aa3.49□□□□□ -1.85
PAX3-210ENST00000555548 TOMM7Q9P0U1 55 aa3.49□□□□□ -1.85
PAX3-210ENST00000555548 SNURFQ9Y675 71 aa3.49□□□□□ -1.85
PAX3-210ENST00000555548 HTN1P15515 57 aa3.48□□□□□ -1.85
PAX3-210ENST00000555548 C4orf3Q8WVX3 66 aa3.48□□□□□ -1.85
PAX3-210ENST00000555548 ZCCHC13Q8WW36 166 aaKnown RBP3.48□□□□□ -1.85
PAX3-210ENST00000555548 LINC00474Q9P2X8 69 aa3.48□□□□□ -1.85
PAX3-210ENST00000555548 SORL1Q92673 2214 aa3.48□□□□□ -1.85
PAX3-210ENST00000555548 DIRC1Q969H9 104 aa3.47□□□□□ -1.85
PAX3-210ENST00000555548 LIMD2Q9BT23 127 aa3.47□□□□□ -1.85
PAX3-210ENST00000555548 IGLV5-48A0A075B6I7 105 aa3.46□□□□□ -1.86
PAX3-210ENST00000555548 IGKV4-1P06312 121 aa3.46□□□□□ -1.86
PAX3-210ENST00000555548 LINC01554Q52M75 96 aa3.46□□□□□ -1.86
PAX3-210ENST00000555548 ATP11AUNQ6ZP68 121 aa3.46□□□□□ -1.86
PAX3-210ENST00000555548 ALMS1Q8TCU4 4167 aa3.45□□□□□ -1.86
PAX3-210ENST00000555548 TRGV2A0A075B6R0 118 aa3.45□□□□□ -1.86
PAX3-210ENST00000555548 TRGV4A0A0C4DH28 118 aa3.45□□□□□ -1.86
PAX3-210ENST00000555548 P0C880 135 aa3.45□□□□□ -1.86
PAX3-210ENST00000555548 UBE2BP63146 152 aa3.45□□□□□ -1.86
PAX3-210ENST00000555548 Q6ZQY7 126 aa3.45□□□□□ -1.86
PAX3-210ENST00000555548 PHF5AQ7RTV0 110 aaKnown RBP3.45□□□□□ -1.86
PAX3-210ENST00000555548 KTN1-AS1Q86SY8 53 aa3.45□□□□□ -1.86
PAX3-210ENST00000555548 C20orf166-AS1Q96NR2 134 aa3.45□□□□□ -1.86
PAX3-210ENST00000555548 KIAA1109Q2LD37 5005 aa3.45□□□□□ -1.86
PAX3-210ENST00000555548 HECTD4Q9Y4D8 3996 aa3.44□□□□□ -1.86
PAX3-210ENST00000555548 ETDCA0A1B0GVM5 59 aa3.44□□□□□ -1.86
PAX3-210ENST00000555548 DEFB136Q30KP8 78 aa3.44□□□□□ -1.86
PAX3-210ENST00000555548 DNAH10Q8IVF4 4471 aa3.44□□□□□ -1.86
PAX3-210ENST00000555548 M0R378 163 aa3.43□□□□□ -1.86
PAX3-210ENST00000555548 KRTAP13-3Q3SY46 172 aa3.43□□□□□ -1.86
PAX3-210ENST00000555548 Q9BRP9 147 aa3.43□□□□□ -1.86
PAX3-210ENST00000555548 NOP10Q9NPE3 64 aaKnown RBP3.43□□□□□ -1.86
PAX3-210ENST00000555548 PRO0255Q9UI72 69 aa3.43□□□□□ -1.86
PAX3-210ENST00000555548 TRAV22A0A0B4J277 110 aa3.42□□□□□ -1.86
PAX3-210ENST00000555548 LOC101927531A0A1B0GV80 90 aa3.42□□□□□ -1.86
PAX3-210ENST00000555548 HCG22E2RYF7 251 aa3.42□□□□□ -1.86
PAX3-210ENST00000555548 LY6G6CO95867 125 aa3.42□□□□□ -1.86
PAX3-210ENST00000555548 SPRR4Q96PI1 79 aa3.42□□□□□ -1.86
PAX3-210ENST00000555548 KCNQ1DNQ9H478 68 aa3.42□□□□□ -1.86
PAX3-210ENST00000555548 ASB16-AS1Q495Z4 193 aa3.41□□□□□ -1.86
PAX3-210ENST00000555548 KMT2AQ03164 3969 aa3.4□□□□□ -1.87
PAX3-210ENST00000555548 M0R2N4 97 aa3.39□□□□□ -1.87
PAX3-210ENST00000555548 PRO2289Q9P1D8 64 aa3.39□□□□□ -1.87
PAX3-210ENST00000555548 SPAG11BQ08648 103 aa3.38□□□□□ -1.87
PAX3-210ENST00000555548 LINC00269Q8N2A0 174 aa3.38□□□□□ -1.87
PAX3-210ENST00000555548 ABCA13Q86UQ4 5058 aa3.38□□□□□ -1.87
PAX3-210ENST00000555548 DNAH6Q9C0G6 4158 aa3.37□□□□□ -1.87
PAX3-210ENST00000555548 IGKV3OR2-268A0A0C4DH90 116 aa3.37□□□□□ -1.87
PAX3-210ENST00000555548 KRTAP9-6A8MVA2 160 aa3.37□□□□□ -1.87
PAX3-210ENST00000555548 IGLV1-51P01701 117 aa3.37□□□□□ -1.87
PAX3-210ENST00000555548 LELP1Q5T871 98 aa3.37□□□□□ -1.87
PAX3-210ENST00000555548 H3BNG1 76 aa3.36□□□□□ -1.87
PAX3-210ENST00000555548 Q5VV11 94 aa3.36□□□□□ -1.87
PAX3-210ENST00000555548 UNQ6190/PRO20217Q6UXQ8 127 aa3.36□□□□□ -1.87
PAX3-210ENST00000555548 CDC42SE1Q9NRR8 79 aa3.36□□□□□ -1.87
PAX3-210ENST00000555548 DYNC1H1Q14204 4646 aaKnown RBP3.35□□□□□ -1.87
PAX3-210ENST00000555548 PKHD1P08F94 4074 aa3.35□□□□□ -1.87
PAX3-210ENST00000555548 ANGP03950 147 aaKnown RBP3.35□□□□□ -1.87
PAX3-210ENST00000555548 LINC00208Q96KT6 92 aa3.35□□□□□ -1.87
PAX3-210ENST00000555548 VPS13DQ5THJ4 4388 aa3.34□□□□□ -1.87
PAX3-210ENST00000555548 SPRR1AP35321 89 aa3.34□□□□□ -1.87
PAX3-210ENST00000555548 CNBPP62633 177 aaKnown RBP3.34□□□□□ -1.87
PAX3-210ENST00000555548 C6orf48Q9UBA6 75 aa3.34□□□□□ -1.87
PAX3-210ENST00000555548 DNAH11Q96DT5 4516 aa3.33□□□□□ -1.88
PAX3-210ENST00000555548 A6NN06 94 aa3.33□□□□□ -1.88
PAX3-210ENST00000555548 CHKB-CPT1BH3BT56 60 aa3.33□□□□□ -1.88
PAX3-210ENST00000555548 C9orf116Q5BN46 136 aaPredicted RBP3.33□□□□□ -1.88
PAX3-210ENST00000555548 C1orf137Q5JT78 98 aa3.33□□□□□ -1.88
PAX3-210ENST00000555548 Q6ZRX8 168 aa3.33□□□□□ -1.88
PAX3-210ENST00000555548 C7orf65Q6ZTY9 151 aa3.33□□□□□ -1.88
PAX3-210ENST00000555548 LINC01558Q9Y6Z2 57 aa3.33□□□□□ -1.88
PAX3-210ENST00000555548 NUPR2A6NF83 97 aa3.32□□□□□ -1.88
PAX3-210ENST00000555548 KRTAP10-8P60410 259 aa3.32□□□□□ -1.88
PAX3-210ENST00000555548 C9orf163Q8N9P6 203 aa3.32□□□□□ -1.88
PAX3-210ENST00000555548 TP53AIP1Q9HCN2 124 aa3.32□□□□□ -1.88
PAX3-210ENST00000555548 PLAC8Q9NZF1 115 aa3.32□□□□□ -1.88
PAX3-210ENST00000555548 DNAH17Q9UFH2 4485 aa3.32□□□□□ -1.88
PAX3-210ENST00000555548 FAT2Q9NYQ8 4349 aa3.31□□□□□ -1.88
PAX3-210ENST00000555548 HSPG2P98160 4391 aa3.3□□□□□ -1.88
PAX3-210ENST00000555548 DEFB130BP0DP73 79 aa3.3□□□□□ -1.88
PAX3-210ENST00000555548 DEFB130AP0DP74 79 aa3.3□□□□□ -1.88
PAX3-210ENST00000555548 WFDC10AQ9H1F0 79 aa3.3□□□□□ -1.88
PAX3-210ENST00000555548 DNAH2Q9P225 4427 aa3.3□□□□□ -1.88
PAX3-210ENST00000555548 HERC1Q15751 4861 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms