RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 ANAPC11Q9NYG5 84 aa5.19□□□□□ -1.58
TDP1-208ENST00000553989 MUC2Q02817 5179 aa5.19□□□□□ -1.58
TDP1-208ENST00000553989 KRTAP4-16G5E9R7 235 aaPredicted RBP5.18□□□□□ -1.58
TDP1-208ENST00000553989 ATP5EP56381 51 aaPredicted RBP5.18□□□□□ -1.58
TDP1-208ENST00000553989 DEFB105AQ8NG35 78 aa5.18□□□□□ -1.58
TDP1-208ENST00000553989 LINC00304Q8N9R0 145 aa5.17□□□□□ -1.58
TDP1-208ENST00000553989 SPRR4Q96PI1 79 aa5.16□□□□□ -1.58
TDP1-208ENST00000553989 SERP1Q9Y6X1 66 aa5.16□□□□□ -1.58
TDP1-208ENST00000553989 FAM236DA0A1B0GTK5 79 aa5.15□□□□□ -1.59
TDP1-208ENST00000553989 FAM236CP0DP71 79 aa5.15□□□□□ -1.59
TDP1-208ENST00000553989 F8WEM9 126 aa5.14□□□□□ -1.59
TDP1-208ENST00000553989 PRLHP81277 87 aa5.14□□□□□ -1.59
TDP1-208ENST00000553989 FAM229BQ4G0N7 80 aa5.14□□□□□ -1.59
TDP1-208ENST00000553989 KRTAP13-2Q52LG2 175 aa5.14□□□□□ -1.59
TDP1-208ENST00000553989 Q8NBF4 154 aa5.14□□□□□ -1.59
TDP1-208ENST00000553989 IGLV7-46A0A075B6I9 117 aa5.13□□□□□ -1.59
TDP1-208ENST00000553989 H7BZZ5 65 aa5.13□□□□□ -1.59
TDP1-208ENST00000553989 IGKV4-1P06312 121 aa5.13□□□□□ -1.59
TDP1-208ENST00000553989 Q9BRP9 147 aa5.13□□□□□ -1.59
TDP1-208ENST00000553989 CYSTM1Q9H1C7 97 aa5.13□□□□□ -1.59
TDP1-208ENST00000553989 A0A1W2PNM2 257 aa5.12□□□□□ -1.59
TDP1-208ENST00000553989 IGLV8-61A0A075B6I0 122 aa5.11□□□□□ -1.59
TDP1-208ENST00000553989 TPRXLQ17RH7 258 aa5.11□□□□□ -1.59
TDP1-208ENST00000553989 C5orf47Q569G3 176 aa5.11□□□□□ -1.59
TDP1-208ENST00000553989 KRTAP13-1Q8IUC0 172 aa5.11□□□□□ -1.59
TDP1-208ENST00000553989 TMEM254Q8TBM7 123 aa5.11□□□□□ -1.59
TDP1-208ENST00000553989 OCR1Q9BZK8 76 aa5.11□□□□□ -1.59
TDP1-208ENST00000553989 SMIM26A0A096LP01 95 aa5.1□□□□□ -1.59
TDP1-208ENST00000553989 ST20-AS1Q8NBB2 130 aa5.09□□□□□ -1.59
TDP1-208ENST00000553989 HIGD2AQ9BW72 106 aa5.09□□□□□ -1.59
TDP1-208ENST00000553989 KRTAP9-6A0A140TA67 174 aa5.08□□□□□ -1.6
TDP1-208ENST00000553989 SPRR1BP22528 89 aa5.08□□□□□ -1.6
TDP1-208ENST00000553989 SMIM29Q86T20 159 aa5.08□□□□□ -1.6
TDP1-208ENST00000553989 SNURFQ9Y675 71 aa5.08□□□□□ -1.6
TDP1-208ENST00000553989 FAT4Q6V0I7 4981 aa5.07□□□□□ -1.6
TDP1-208ENST00000553989 SPAG11AQ6PDA7 123 aa5.06□□□□□ -1.6
TDP1-208ENST00000553989 DSCR10P59022 87 aa5.05□□□□□ -1.6
TDP1-208ENST00000553989 Q8N9L7 120 aa5.05□□□□□ -1.6
TDP1-208ENST00000553989 ZNF706Q9Y5V0 76 aaPredicted RBP5.05□□□□□ -1.6
TDP1-208ENST00000553989 LOC100996750A0A140TA64 210 aa5.04□□□□□ -1.6
TDP1-208ENST00000553989 FP248Q71RG6 208 aaPredicted RBP5.04□□□□□ -1.6
TDP1-208ENST00000553989 KRTAP4-6Q9BYQ5 205 aa5.04□□□□□ -1.6
TDP1-208ENST00000553989 HCG22E2RYF7 251 aa5.03□□□□□ -1.6
TDP1-208ENST00000553989 NDUFB1O75438 58 aa5.03□□□□□ -1.6
TDP1-208ENST00000553989 IGFL1Q6UW32 110 aa5.03□□□□□ -1.6
TDP1-208ENST00000553989 H3BPC8 53 aa5.02□□□□□ -1.61
TDP1-208ENST00000553989 Q5XG85 94 aa5.02□□□□□ -1.61
TDP1-208ENST00000553989 MP68P56378 58 aa5.01□□□□□ -1.61
TDP1-208ENST00000553989 C4orf26Q17RF5 130 aa5□□□□□ -1.61
TDP1-208ENST00000553989 MUC17Q685J3 4493 aa4.99□□□□□ -1.61
TDP1-208ENST00000553989 SEC61BP60468 96 aaKnown RBP4.99□□□□□ -1.61
TDP1-208ENST00000553989 KRTAP13-3Q3SY46 172 aa4.99□□□□□ -1.61
TDP1-208ENST00000553989 ZCCHC13Q8WW36 166 aaKnown RBP4.99□□□□□ -1.61
TDP1-208ENST00000553989 A0A087WSZ3 146 aa4.98□□□□□ -1.61
TDP1-208ENST00000553989 IGLV9-49A0A0B4J1Y8 123 aa4.98□□□□□ -1.61
TDP1-208ENST00000553989 K7EQZ3 153 aa4.98□□□□□ -1.61
TDP1-208ENST00000553989 SPINK1P00995 79 aa4.98□□□□□ -1.61
TDP1-208ENST00000553989 ASB16-AS1Q495Z4 193 aa4.98□□□□□ -1.61
TDP1-208ENST00000553989 PRR15Q8IV56 129 aa4.98□□□□□ -1.61
TDP1-208ENST00000553989 hDV103S1A0JD37 113 aa4.97□□□□□ -1.61
TDP1-208ENST00000553989 A8MWP4 228 aa4.97□□□□□ -1.61
TDP1-208ENST00000553989 MOBPQ13875 183 aa4.97□□□□□ -1.61
TDP1-208ENST00000553989 KRTAP19-1Q8IUB9 90 aa4.96□□□□□ -1.62
TDP1-208ENST00000553989 CYP4F30PQ9H0H9 118 aa4.96□□□□□ -1.62
TDP1-208ENST00000553989 LINC00472Q9H8W2 130 aa4.96□□□□□ -1.62
TDP1-208ENST00000553989 HRCT1Q6UXD1 115 aa4.95□□□□□ -1.62
TDP1-208ENST00000553989 CASC2Q6XLA1 102 aa4.95□□□□□ -1.62
TDP1-208ENST00000553989 SPANXA2-OT1Q8N9U9 137 aa4.94□□□□□ -1.62
TDP1-208ENST00000553989 MPLKIPQ8TAP9 179 aa4.94□□□□□ -1.62
TDP1-208ENST00000553989 TP53AIP1Q9HCN2 124 aa4.94□□□□□ -1.62
TDP1-208ENST00000553989 LINC00483Q53H64 154 aa4.93□□□□□ -1.62
TDP1-208ENST00000553989 KRTAP4-1Q9BYQ7 146 aa4.93□□□□□ -1.62
TDP1-208ENST00000553989 RPS29P62273 56 aaKnown RBP4.92□□□□□ -1.62
TDP1-208ENST00000553989 SSBP3-AS1Q7Z2R9 100 aa4.92□□□□□ -1.62
TDP1-208ENST00000553989 V9GYY9 64 aa4.92□□□□□ -1.62
TDP1-208ENST00000553989 WFDC13Q8IUB5 93 aa4.91□□□□□ -1.62
TDP1-208ENST00000553989 PRO0628Q9UI54 55 aa4.91□□□□□ -1.62
TDP1-208ENST00000553989 FSIP2Q5CZC0 6907 aa4.9□□□□□ -1.62
TDP1-208ENST00000553989 TRAV22A0A0B4J277 110 aa4.9□□□□□ -1.63
TDP1-208ENST00000553989 Q1T7F1 81 aa4.9□□□□□ -1.63
TDP1-208ENST00000553989 DEFB116Q30KQ4 102 aa4.9□□□□□ -1.63
TDP1-208ENST00000553989 LINC00208Q96KT6 92 aa4.9□□□□□ -1.63
TDP1-208ENST00000553989 A0A0G2JQZ4 141 aa4.89□□□□□ -1.63
TDP1-208ENST00000553989 H0Y9P7 68 aa4.89□□□□□ -1.63
TDP1-208ENST00000553989 C1orf64Q8NEQ6 169 aa4.88□□□□□ -1.63
TDP1-208ENST00000553989 KRTAP4-12Q9BQ66 201 aa4.88□□□□□ -1.63
TDP1-208ENST00000553989 CRCT1Q9UGL9 99 aa4.88□□□□□ -1.63
TDP1-208ENST00000553989 LIMD2Q9BT23 127 aa4.86□□□□□ -1.63
TDP1-208ENST00000553989 MMP24-AS1A0A0U1RRL7 71 aa4.85□□□□□ -1.63
TDP1-208ENST00000553989 C9orf92A6NGG3 77 aa4.85□□□□□ -1.63
TDP1-208ENST00000553989 CD164Q04900 197 aa4.85□□□□□ -1.63
TDP1-208ENST00000553989 C1orf195Q5TG92 126 aa4.85□□□□□ -1.63
TDP1-208ENST00000553989 KRTAP4-8Q9BYQ9 185 aa4.85□□□□□ -1.63
TDP1-208ENST00000553989 PCOTHQ58A44 107 aa4.84□□□□□ -1.63
TDP1-208ENST00000553989 C8orf17Q9NRJ1 99 aa4.84□□□□□ -1.63
TDP1-208ENST00000553989 A0A1B0GVX0 72 aa4.83□□□□□ -1.64
TDP1-208ENST00000553989 KRTAP9-7A8MTY7 169 aa4.83□□□□□ -1.64
TDP1-208ENST00000553989 Q96NJ1 140 aa4.82□□□□□ -1.64
TDP1-208ENST00000553989 MT1HP80294 61 aa4.81□□□□□ -1.64
TDP1-208ENST00000553989 Q75L30 129 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms