RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 C1orf195Q5TG92 126 aa7.38□□□□□ -1.23
NUP188-211ENST00000550219 C9orf92A6NGG3 77 aa7.35□□□□□ -1.23
NUP188-211ENST00000550219 Q96NJ1 140 aa7.35□□□□□ -1.23
NUP188-211ENST00000550219 LINC00472Q9H8W2 130 aa7.34□□□□□ -1.23
NUP188-211ENST00000550219 PCOTHQ58A44 107 aa7.31□□□□□ -1.24
NUP188-211ENST00000550219 LINC00846Q9NV44 126 aa7.3□□□□□ -1.24
NUP188-211ENST00000550219 FAM240AA0A1B0GVK7 77 aa7.29□□□□□ -1.24
NUP188-211ENST00000550219 NREPQ16612 68 aa7.29□□□□□ -1.24
NUP188-211ENST00000550219 ACYP1P07311 99 aa7.28□□□□□ -1.24
NUP188-211ENST00000550219 Q6ZVQ6 151 aa7.26□□□□□ -1.25
NUP188-211ENST00000550219 J3KT08 172 aa7.25□□□□□ -1.25
NUP188-211ENST00000550219 IGKV4-1P06312 121 aa7.25□□□□□ -1.25
NUP188-211ENST00000550219 DEFB116Q30KQ4 102 aa7.25□□□□□ -1.25
NUP188-211ENST00000550219 LCE2CQ5TA81 110 aa7.25□□□□□ -1.25
NUP188-211ENST00000550219 UBL5Q9BZL1 73 aa7.24□□□□□ -1.25
NUP188-211ENST00000550219 J3QR89 54 aa7.22□□□□□ -1.25
NUP188-211ENST00000550219 KRTAP19-2Q3LHN2 52 aa7.22□□□□□ -1.25
NUP188-211ENST00000550219 MT1HP80294 61 aa7.21□□□□□ -1.26
NUP188-211ENST00000550219 SIGMAR1Q99720 223 aa7.21□□□□□ -1.26
NUP188-211ENST00000550219 DSCR10P59022 87 aa7.2□□□□□ -1.26
NUP188-211ENST00000550219 A8MWP4 228 aa7.19□□□□□ -1.26
NUP188-211ENST00000550219 BPY2O14599 106 aa7.19□□□□□ -1.26
NUP188-211ENST00000550219 IGKV3D-7A0A0C4DH55 119 aa7.17□□□□□ -1.26
NUP188-211ENST00000550219 A0A1B0GVX0 72 aa7.17□□□□□ -1.26
NUP188-211ENST00000550219 NDUFB1O75438 58 aa7.16□□□□□ -1.26
NUP188-211ENST00000550219 RPL37P61927 97 aaKnown RBP7.16□□□□□ -1.26
NUP188-211ENST00000550219 PRR15Q8IV56 129 aa7.16□□□□□ -1.26
NUP188-211ENST00000550219 K7ERU9 68 aa7.15□□□□□ -1.26
NUP188-211ENST00000550219 CXCL6P80162 114 aa7.15□□□□□ -1.26
NUP188-211ENST00000550219 CRCT1Q9UGL9 99 aa7.15□□□□□ -1.26
NUP188-211ENST00000550219 IGHV6-1A0A0B4J1U7 121 aa7.14□□□□□ -1.27
NUP188-211ENST00000550219 C8orf87E5RJ46 101 aa7.14□□□□□ -1.27
NUP188-211ENST00000550219 K7EQZ3 153 aa7.13□□□□□ -1.27
NUP188-211ENST00000550219 LINC00313P59037 77 aa7.13□□□□□ -1.27
NUP188-211ENST00000550219 COX6B2Q6YFQ2 88 aa7.13□□□□□ -1.27
NUP188-211ENST00000550219 NOTCH2NLQ7Z3S9 236 aa7.13□□□□□ -1.27
NUP188-211ENST00000550219 LINC00643Q86TS7 51 aa7.13□□□□□ -1.27
NUP188-211ENST00000550219 M0R2T5 61 aa7.12□□□□□ -1.27
NUP188-211ENST00000550219 ATP5EP2Q5VTU8 51 aa7.11□□□□□ -1.27
NUP188-211ENST00000550219 KRTAP16-1A8MUX0 517 aa7.1□□□□□ -1.27
NUP188-211ENST00000550219 Q8N9L7 120 aa7.1□□□□□ -1.27
NUP188-211ENST00000550219 C8orf17Q9NRJ1 99 aa7.1□□□□□ -1.27
NUP188-211ENST00000550219 KRTAP10-6P60371 365 aaPredicted RBP7.09□□□□□ -1.27
NUP188-211ENST00000550219 MMP24-AS1A0A0U1RRL7 71 aa7.07□□□□□ -1.28
NUP188-211ENST00000550219 LORP23490 312 aaPredicted RBP7.07□□□□□ -1.28
NUP188-211ENST00000550219 C20orf166-AS1Q96NR2 134 aa7.06□□□□□ -1.28
NUP188-211ENST00000550219 A8MUU9 505 aa7.05□□□□□ -1.28
NUP188-211ENST00000550219 Q75L30 129 aa7.05□□□□□ -1.28
NUP188-211ENST00000550219 TMEM254Q8TBM7 123 aa7.03□□□□□ -1.28
NUP188-211ENST00000550219 FSIP2Q5CZC0 6907 aa7.02□□□□□ -1.29
NUP188-211ENST00000550219 hDV103S1A0JD37 113 aa7.02□□□□□ -1.29
NUP188-211ENST00000550219 Q8N9P0 234 aaPredicted RBP7.02□□□□□ -1.29
NUP188-211ENST00000550219 HCG22E2RYF7 251 aa7□□□□□ -1.29
NUP188-211ENST00000550219 ATP11AUNQ6ZP68 121 aa7□□□□□ -1.29
NUP188-211ENST00000550219 MRPL34Q9BQ48 92 aaKnown RBP7□□□□□ -1.29
NUP188-211ENST00000550219 CASC2Q6XLA1 102 aa6.99□□□□□ -1.29
NUP188-211ENST00000550219 WFDC13Q8IUB5 93 aa6.98□□□□□ -1.29
NUP188-211ENST00000550219 HIST1H4AP62805 103 aaKnown RBP6.97□□□□□ -1.29
NUP188-211ENST00000550219 MT-ATP8P03928 68 aa6.96□□□□□ -1.3
NUP188-211ENST00000550219 IMUPQ9GZP8 106 aa6.95□□□□□ -1.3
NUP188-211ENST00000550219 FLGP20930 4061 aaPredicted RBP6.95□□□□□ -1.3
NUP188-211ENST00000550219 A0A087WVE0 104 aa6.93□□□□□ -1.3
NUP188-211ENST00000550219 ZCCHC13Q8WW36 166 aaKnown RBP6.9□□□□□ -1.3
NUP188-211ENST00000550219 NDUFS5O43920 106 aa6.88□□□□□ -1.31
NUP188-211ENST00000550219 TP53AIP1Q9HCN2 124 aa6.86□□□□□ -1.31
NUP188-211ENST00000550219 Q5W150 140 aa6.84□□□□□ -1.31
NUP188-211ENST00000550219 LOC100996750A0A140TA64 210 aa6.82□□□□□ -1.32
NUP188-211ENST00000550219 KRTAP4-6Q9BYQ5 205 aa6.82□□□□□ -1.32
NUP188-211ENST00000550219 OCR1Q9BZK8 76 aa6.8□□□□□ -1.32
NUP188-211ENST00000550219 FAM236DA0A1B0GTK5 79 aa6.79□□□□□ -1.32
NUP188-211ENST00000550219 UQCRQO14949 82 aa6.79□□□□□ -1.32
NUP188-211ENST00000550219 FAM236CP0DP71 79 aa6.79□□□□□ -1.32
NUP188-211ENST00000550219 FAM236AA0A1B0GUQ0 79 aa6.78□□□□□ -1.32
NUP188-211ENST00000550219 FAM236BA0A1B0GV22 79 aa6.78□□□□□ -1.32
NUP188-211ENST00000550219 SCGB1A1P11684 91 aa6.77□□□□□ -1.33
NUP188-211ENST00000550219 KRTAP9-8Q9BYQ0 159 aa6.76□□□□□ -1.33
NUP188-211ENST00000550219 SPINK7P58062 85 aa6.75□□□□□ -1.33
NUP188-211ENST00000550219 TRAV22A0A0B4J277 110 aa6.74□□□□□ -1.33
NUP188-211ENST00000550219 IGKV2-30P06310 120 aa6.71□□□□□ -1.34
NUP188-211ENST00000550219 HRES1P13985 223 aa6.71□□□□□ -1.34
NUP188-211ENST00000550219 SMIM20Q8N5G0 67 aa6.71□□□□□ -1.34
NUP188-211ENST00000550219 ATOX1O00244 68 aa6.7□□□□□ -1.34
NUP188-211ENST00000550219 C5orf47Q569G3 176 aa6.7□□□□□ -1.34
NUP188-211ENST00000550219 C7orf65Q6ZTY9 151 aa6.7□□□□□ -1.34
NUP188-211ENST00000550219 RBM12B-AS1Q9P1G2 102 aa6.7□□□□□ -1.34
NUP188-211ENST00000550219 IGKV2D-30A0A075B6S6 120 aa6.69□□□□□ -1.34
NUP188-211ENST00000550219 TRAV7A0A075B6U4 112 aa6.69□□□□□ -1.34
NUP188-211ENST00000550219 H0Y9P7 68 aa6.69□□□□□ -1.34
NUP188-211ENST00000550219 MT2AP02795 61 aa6.69□□□□□ -1.34
NUP188-211ENST00000550219 MPLKIPQ8TAP9 179 aa6.69□□□□□ -1.34
NUP188-211ENST00000550219 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.68□□□□□ -1.34
NUP188-211ENST00000550219 LOC101927531A0A1B0GV80 90 aa6.67□□□□□ -1.34
NUP188-211ENST00000550219 KRTAP9-7A8MTY7 169 aa6.65□□□□□ -1.34
NUP188-211ENST00000550219 H3BPC8 53 aa6.65□□□□□ -1.34
NUP188-211ENST00000550219 MP68P56378 58 aa6.65□□□□□ -1.34
NUP188-211ENST00000550219 CYP4F30PQ9H0H9 118 aa6.65□□□□□ -1.34
NUP188-211ENST00000550219 MT1FP04733 61 aa6.64□□□□□ -1.35
NUP188-211ENST00000550219 C1orf64Q8NEQ6 169 aa6.63□□□□□ -1.35
NUP188-211ENST00000550219 LINC00208Q96KT6 92 aa6.63□□□□□ -1.35
NUP188-211ENST00000550219 SERP2Q8N6R1 65 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms