RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 Q75L30 129 aa5.99□□□□□ -1.45
TRAF1-203ENST00000546084 MEGF8Q7Z7M0 2845 aa5.97□□□□□ -1.45
TRAF1-203ENST00000546084 KRTAP29-1A8MX34 341 aaPredicted RBP5.96□□□□□ -1.46
TRAF1-203ENST00000546084 DNHD1Q96M86 4753 aa5.96□□□□□ -1.46
TRAF1-203ENST00000546084 H3BPC8 53 aa5.95□□□□□ -1.46
TRAF1-203ENST00000546084 ZNF861PO60384 105 aa5.95□□□□□ -1.46
TRAF1-203ENST00000546084 SPINT4Q6UDR6 99 aa5.95□□□□□ -1.46
TRAF1-203ENST00000546084 C8orf17Q9NRJ1 99 aa5.95□□□□□ -1.46
TRAF1-203ENST00000546084 A0A087X002 238 aa5.95□□□□□ -1.46
TRAF1-203ENST00000546084 NOTCH2NLQ7Z3S9 236 aa5.95□□□□□ -1.46
TRAF1-203ENST00000546084 LINC00472Q9H8W2 130 aa5.95□□□□□ -1.46
TRAF1-203ENST00000546084 SPANXA2-OT1Q8N9U9 137 aa5.94□□□□□ -1.46
TRAF1-203ENST00000546084 SPINK7P58062 85 aa5.92□□□□□ -1.46
TRAF1-203ENST00000546084 MIR22HGQ0VDD5 57 aa5.92□□□□□ -1.46
TRAF1-203ENST00000546084 MMP24-AS1A0A0U1RRL7 71 aa5.91□□□□□ -1.46
TRAF1-203ENST00000546084 KRTAP10-2P60368 255 aa5.91□□□□□ -1.46
TRAF1-203ENST00000546084 PLA2G1BP04054 148 aaKnown RBP5.91□□□□□ -1.46
TRAF1-203ENST00000546084 MRPL34Q9BQ48 92 aaKnown RBP5.9□□□□□ -1.46
TRAF1-203ENST00000546084 A0A1B0GVX0 72 aa5.9□□□□□ -1.47
TRAF1-203ENST00000546084 A0A1B0GU69 56 aa5.89□□□□□ -1.47
TRAF1-203ENST00000546084 C9orf92A6NGG3 77 aa5.89□□□□□ -1.47
TRAF1-203ENST00000546084 IGLV7-43P04211 117 aa5.89□□□□□ -1.47
TRAF1-203ENST00000546084 K7ERS5 55 aa5.89□□□□□ -1.47
TRAF1-203ENST00000546084 TP53AIP1Q9HCN2 124 aa5.88□□□□□ -1.47
TRAF1-203ENST00000546084 KRTAP16-1A8MUX0 517 aa5.87□□□□□ -1.47
TRAF1-203ENST00000546084 IGLV7-46A0A075B6I9 117 aa5.87□□□□□ -1.47
TRAF1-203ENST00000546084 Q96NJ1 140 aa5.87□□□□□ -1.47
TRAF1-203ENST00000546084 SPRR1BP22528 89 aa5.87□□□□□ -1.47
TRAF1-203ENST00000546084 TYMSOSQ8TAI1 123 aa5.86□□□□□ -1.47
TRAF1-203ENST00000546084 WWC2-AS2Q96NR7 200 aa5.84□□□□□ -1.48
TRAF1-203ENST00000546084 SSBP3-AS1Q7Z2R9 100 aa5.83□□□□□ -1.48
TRAF1-203ENST00000546084 Q8N1X5 172 aa5.83□□□□□ -1.48
TRAF1-203ENST00000546084 Q6ZRN7 208 aaPredicted RBP5.82□□□□□ -1.48
TRAF1-203ENST00000546084 DNAH10Q8IVF4 4471 aa5.82□□□□□ -1.48
TRAF1-203ENST00000546084 CMYA5Q8N3K9 4069 aa5.82□□□□□ -1.48
TRAF1-203ENST00000546084 KRTAP10-1P60331 282 aa5.81□□□□□ -1.48
TRAF1-203ENST00000546084 UQCR11O14957 56 aa5.8□□□□□ -1.48
TRAF1-203ENST00000546084 HRES1P13985 223 aa5.8□□□□□ -1.48
TRAF1-203ENST00000546084 LINC01558Q9Y6Z2 57 aa5.79□□□□□ -1.48
TRAF1-203ENST00000546084 LYSTQ99698 3801 aa5.79□□□□□ -1.48
TRAF1-203ENST00000546084 Q5W150 140 aa5.78□□□□□ -1.48
TRAF1-203ENST00000546084 ROMO1P60602 79 aa5.76□□□□□ -1.49
TRAF1-203ENST00000546084 PLAC8Q9NZF1 115 aa5.76□□□□□ -1.49
TRAF1-203ENST00000546084 LUZP6Q538Z0 58 aa5.75□□□□□ -1.49
TRAF1-203ENST00000546084 Q6ZR54 194 aa5.75□□□□□ -1.49
TRAF1-203ENST00000546084 ACYP2P14621 99 aa5.74□□□□□ -1.49
TRAF1-203ENST00000546084 KRTAP13-1Q8IUC0 172 aa5.74□□□□□ -1.49
TRAF1-203ENST00000546084 PRKDCP78527 4128 aaKnown RBP5.72□□□□□ -1.49
TRAF1-203ENST00000546084 HUWE1Q7Z6Z7 4374 aaKnown RBP5.72□□□□□ -1.49
TRAF1-203ENST00000546084 CRIPTQ9P021 101 aa5.72□□□□□ -1.49
TRAF1-203ENST00000546084 NDUFAF8A1L188 74 aa5.71□□□□□ -1.5
TRAF1-203ENST00000546084 FAM229AH3BQW9 127 aa5.7□□□□□ -1.5
TRAF1-203ENST00000546084 LINC00483Q53H64 154 aa5.69□□□□□ -1.5
TRAF1-203ENST00000546084 LINC00304Q8N9R0 145 aa5.69□□□□□ -1.5
TRAF1-203ENST00000546084 ASB16-AS1Q495Z4 193 aa5.68□□□□□ -1.5
TRAF1-203ENST00000546084 KRTAP13-2Q52LG2 175 aa5.65□□□□□ -1.5
TRAF1-203ENST00000546084 PLECQ15149 4684 aaKnown RBP5.62□□□□□ -1.51
TRAF1-203ENST00000546084 DNAH9Q9NYC9 4486 aa5.6□□□□□ -1.51
TRAF1-203ENST00000546084 DNAH3Q8TD57 4116 aa5.6□□□□□ -1.51
TRAF1-203ENST00000546084 DMAC1Q96GE9 116 aa5.58□□□□□ -1.52
TRAF1-203ENST00000546084 KRTAP25-1Q3LHN0 102 aa5.57□□□□□ -1.52
TRAF1-203ENST00000546084 DNAH1Q9P2D7 4330 aa5.56□□□□□ -1.52
TRAF1-203ENST00000546084 SEC61BP60468 96 aaKnown RBP5.56□□□□□ -1.52
TRAF1-203ENST00000546084 DNAH7Q8WXX0 4024 aa5.56□□□□□ -1.52
TRAF1-203ENST00000546084 A0A0D9SG42 100 aa5.55□□□□□ -1.52
TRAF1-203ENST00000546084 STARD9Q9P2P6 4700 aa5.53□□□□□ -1.52
TRAF1-203ENST00000546084 C20orf166-AS1Q96NR2 134 aa5.52□□□□□ -1.53
TRAF1-203ENST00000546084 KMT2AQ03164 3969 aa5.52□□□□□ -1.53
TRAF1-203ENST00000546084 KRTAP13-3Q3SY46 172 aa5.52□□□□□ -1.53
TRAF1-203ENST00000546084 SPATA8Q6RVD6 105 aa5.51□□□□□ -1.53
TRAF1-203ENST00000546084 DNAH11Q96DT5 4516 aa5.5□□□□□ -1.53
TRAF1-203ENST00000546084 FRAS1Q86XX4 4008 aa5.48□□□□□ -1.53
TRAF1-203ENST00000546084 A8MUU9 505 aa5.48□□□□□ -1.53
TRAF1-203ENST00000546084 J3QL48 77 aa5.48□□□□□ -1.53
TRAF1-203ENST00000546084 KRTAP1-4P0C5Y4 121 aa5.45□□□□□ -1.54
TRAF1-203ENST00000546084 DNAH8Q96JB1 4490 aa5.42□□□□□ -1.54
TRAF1-203ENST00000546084 Q5VSD8 79 aa5.38□□□□□ -1.55
TRAF1-203ENST00000546084 HYDINQ4G0P3 5121 aa5.38□□□□□ -1.55
TRAF1-203ENST00000546084 A0A1B0GU33 70 aa5.37□□□□□ -1.55
TRAF1-203ENST00000546084 P0C880 135 aa5.36□□□□□ -1.55
TRAF1-203ENST00000546084 KRTAP21-3Q3LHN1 58 aa5.36□□□□□ -1.55
TRAF1-203ENST00000546084 Q6ZSA8 131 aa5.36□□□□□ -1.55
TRAF1-203ENST00000546084 FAT1Q14517 4588 aa5.36□□□□□ -1.55
TRAF1-203ENST00000546084 KMT2CQ8NEZ4 4911 aaKnown RBP5.34□□□□□ -1.55
TRAF1-203ENST00000546084 LRP1BQ9NZR2 4599 aa5.33□□□□□ -1.56
TRAF1-203ENST00000546084 DNAH6Q9C0G6 4158 aa5.33□□□□□ -1.56
TRAF1-203ENST00000546084 DNAH17Q9UFH2 4485 aa5.33□□□□□ -1.56
TRAF1-203ENST00000546084 VPS13DQ5THJ4 4388 aa5.31□□□□□ -1.56
TRAF1-203ENST00000546084 HECTD4Q9Y4D8 3996 aa5.31□□□□□ -1.56
TRAF1-203ENST00000546084 MYCBP2O75592 4640 aa5.29□□□□□ -1.56
TRAF1-203ENST00000546084 DNAH2Q9P225 4427 aa5.27□□□□□ -1.57
TRAF1-203ENST00000546084 DNAH5Q8TE73 4624 aa5.26□□□□□ -1.57
TRAF1-203ENST00000546084 H0YAA0 97 aa5.25□□□□□ -1.57
TRAF1-203ENST00000546084 H1FX-AS1Q4G0G2 97 aa5.22□□□□□ -1.57
TRAF1-203ENST00000546084 ALMS1Q8TCU4 4167 aa5.22□□□□□ -1.57
TRAF1-203ENST00000546084 DYNC2H1Q8NCM8 4307 aaKnown RBP5.22□□□□□ -1.57
TRAF1-203ENST00000546084 SACSQ9NZJ4 4579 aa5.21□□□□□ -1.58
TRAF1-203ENST00000546084 PKHD1P08F94 4074 aa5.21□□□□□ -1.58
TRAF1-203ENST00000546084 COX6B2Q6YFQ2 88 aa5.2□□□□□ -1.58
TRAF1-203ENST00000546084 S4R3F8 94 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms