RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 LCE6AA0A183 80 aa5.64□□□□□ -1.51
SF3B2-216ENST00000534765 KRTAP3-3Q9BYR6 98 aa5.64□□□□□ -1.51
SF3B2-216ENST00000534765 KRTAP3-2Q9BYR7 98 aa5.64□□□□□ -1.51
SF3B2-216ENST00000534765 DMBT1Q9UGM3 2413 aaPredicted RBP5.63□□□□□ -1.51
SF3B2-216ENST00000534765 GVQW2A0A096LPI5 108 aaPredicted RBP5.63□□□□□ -1.51
SF3B2-216ENST00000534765 H3BPC8 53 aa5.63□□□□□ -1.51
SF3B2-216ENST00000534765 PANO1I0J062 215 aa5.63□□□□□ -1.51
SF3B2-216ENST00000534765 SPINK6Q6UWN8 80 aa5.63□□□□□ -1.51
SF3B2-216ENST00000534765 Q6ZRX8 168 aa5.63□□□□□ -1.51
SF3B2-216ENST00000534765 IGFL1Q6UW32 110 aa5.63□□□□□ -1.51
SF3B2-216ENST00000534765 Q6ZRN7 208 aaPredicted RBP5.63□□□□□ -1.51
SF3B2-216ENST00000534765 KRTAP11-1Q8IUC1 163 aa5.62□□□□□ -1.51
SF3B2-216ENST00000534765 VPS13BQ7Z7G8 4022 aa5.62□□□□□ -1.51
SF3B2-216ENST00000534765 IGLV1-50A0A075B6I6 118 aa5.61□□□□□ -1.51
SF3B2-216ENST00000534765 RYR2Q92736 4967 aa5.61□□□□□ -1.51
SF3B2-216ENST00000534765 IGLV7-46A0A075B6I9 117 aa5.61□□□□□ -1.51
SF3B2-216ENST00000534765 MIR22HGQ0VDD5 57 aa5.61□□□□□ -1.51
SF3B2-216ENST00000534765 HRES1P13985 223 aa5.6□□□□□ -1.51
SF3B2-216ENST00000534765 IGLV9-49A0A0B4J1Y8 123 aa5.59□□□□□ -1.51
SF3B2-216ENST00000534765 CHTF8P0CG12 524 aa5.59□□□□□ -1.51
SF3B2-216ENST00000534765 SPINK1P00995 79 aa5.59□□□□□ -1.52
SF3B2-216ENST00000534765 C9orf163Q8N9P6 203 aa5.58□□□□□ -1.52
SF3B2-216ENST00000534765 CRIPTQ9P021 101 aa5.58□□□□□ -1.52
SF3B2-216ENST00000534765 A0A1B0GW54 56 aa5.57□□□□□ -1.52
SF3B2-216ENST00000534765 CNBPP62633 177 aaKnown RBP5.57□□□□□ -1.52
SF3B2-216ENST00000534765 A8MWP4 228 aa5.57□□□□□ -1.52
SF3B2-216ENST00000534765 SPRR4Q96PI1 79 aa5.56□□□□□ -1.52
SF3B2-216ENST00000534765 REG3GQ6UW15 175 aa5.56□□□□□ -1.52
SF3B2-216ENST00000534765 NBDYA0A0U1RRE5 68 aa5.55□□□□□ -1.52
SF3B2-216ENST00000534765 PLA2G1BP04054 148 aaKnown RBP5.55□□□□□ -1.52
SF3B2-216ENST00000534765 Q6ZR54 194 aa5.55□□□□□ -1.52
SF3B2-216ENST00000534765 UQCR11O14957 56 aa5.55□□□□□ -1.52
SF3B2-216ENST00000534765 ACYP2P14621 99 aa5.53□□□□□ -1.52
SF3B2-216ENST00000534765 NUPR2A6NF83 97 aa5.52□□□□□ -1.53
SF3B2-216ENST00000534765 DYNC1H1Q14204 4646 aaKnown RBP5.52□□□□□ -1.53
SF3B2-216ENST00000534765 KRTAP4-16G5E9R7 235 aaPredicted RBP5.51□□□□□ -1.53
SF3B2-216ENST00000534765 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.51□□□□□ -1.53
SF3B2-216ENST00000534765 FAT1Q14517 4588 aa5.5□□□□□ -1.53
SF3B2-216ENST00000534765 J3QL48 77 aa5.5□□□□□ -1.53
SF3B2-216ENST00000534765 TLX1NBP0CAT3 122 aa5.5□□□□□ -1.53
SF3B2-216ENST00000534765 KRTAP21-3Q3LHN1 58 aa5.5□□□□□ -1.53
SF3B2-216ENST00000534765 KRTAP29-1A8MX34 341 aaPredicted RBP5.5□□□□□ -1.53
SF3B2-216ENST00000534765 SSBP3-AS1Q7Z2R9 100 aa5.5□□□□□ -1.53
SF3B2-216ENST00000534765 SPINT4Q6UDR6 99 aa5.49□□□□□ -1.53
SF3B2-216ENST00000534765 APOBP04114 4563 aaKnown RBP5.49□□□□□ -1.53
SF3B2-216ENST00000534765 TP53AIP1Q9HCN2 124 aa5.49□□□□□ -1.53
SF3B2-216ENST00000534765 IGLV5-37A0A075B6J1 123 aa5.48□□□□□ -1.53
SF3B2-216ENST00000534765 TNP2Q05952 138 aa5.48□□□□□ -1.53
SF3B2-216ENST00000534765 LY6G6CO95867 125 aa5.48□□□□□ -1.53
SF3B2-216ENST00000534765 ANAPC11Q9NYG5 84 aa5.47□□□□□ -1.53
SF3B2-216ENST00000534765 MMP24-AS1A0A0U1RRL7 71 aa5.47□□□□□ -1.53
SF3B2-216ENST00000534765 KRTAP10-2P60368 255 aa5.47□□□□□ -1.53
SF3B2-216ENST00000534765 RTL8CO15255 209 aa5.46□□□□□ -1.53
SF3B2-216ENST00000534765 A0A087WTM6 91 aa5.46□□□□□ -1.54
SF3B2-216ENST00000534765 C8orf17Q9NRJ1 99 aa5.45□□□□□ -1.54
SF3B2-216ENST00000534765 A0A0A0MQY5 61 aa5.44□□□□□ -1.54
SF3B2-216ENST00000534765 SPRR1AP35321 89 aa5.44□□□□□ -1.54
SF3B2-216ENST00000534765 EPPK1P58107 5090 aaKnown RBP5.43□□□□□ -1.54
SF3B2-216ENST00000534765 PLA2G2DQ9UNK4 145 aa5.43□□□□□ -1.54
SF3B2-216ENST00000534765 ROMO1P60602 79 aa5.42□□□□□ -1.54
SF3B2-216ENST00000534765 MRPL34Q9BQ48 92 aaKnown RBP5.42□□□□□ -1.54
SF3B2-216ENST00000534765 CIRBP-AS1Q8TBR5 109 aa5.42□□□□□ -1.54
SF3B2-216ENST00000534765 IGKV2D-30A0A075B6S6 120 aa5.42□□□□□ -1.54
SF3B2-216ENST00000534765 IGKV2-30P06310 120 aa5.42□□□□□ -1.54
SF3B2-216ENST00000534765 SPACA4Q8TDM5 124 aa5.4□□□□□ -1.55
SF3B2-216ENST00000534765 WWC2-AS2Q96NR7 200 aa5.4□□□□□ -1.55
SF3B2-216ENST00000534765 PKHD1L1Q86WI1 4243 aa5.39□□□□□ -1.55
SF3B2-216ENST00000534765 LINC00472Q9H8W2 130 aa5.39□□□□□ -1.55
SF3B2-216ENST00000534765 SPATA8Q6RVD6 105 aa5.38□□□□□ -1.55
SF3B2-216ENST00000534765 PLAC8Q9NZF1 115 aa5.38□□□□□ -1.55
SF3B2-216ENST00000534765 HSPG2P98160 4391 aa5.37□□□□□ -1.55
SF3B2-216ENST00000534765 K7ERS5 55 aa5.36□□□□□ -1.55
SF3B2-216ENST00000534765 A0A1B0GVX0 72 aa5.36□□□□□ -1.55
SF3B2-216ENST00000534765 KRTAP10-1P60331 282 aa5.35□□□□□ -1.55
SF3B2-216ENST00000534765 LRP1Q07954 4544 aaKnown RBP5.35□□□□□ -1.55
SF3B2-216ENST00000534765 KRTAP13-1Q8IUC0 172 aa5.35□□□□□ -1.55
SF3B2-216ENST00000534765 NDUFAF8A1L188 74 aa5.33□□□□□ -1.56
SF3B2-216ENST00000534765 A0A087X002 238 aa5.33□□□□□ -1.56
SF3B2-216ENST00000534765 NOTCH2NLQ7Z3S9 236 aa5.33□□□□□ -1.56
SF3B2-216ENST00000534765 KRTAP25-1Q3LHN0 102 aa5.33□□□□□ -1.56
SF3B2-216ENST00000534765 ASB16-AS1Q495Z4 193 aa5.33□□□□□ -1.56
SF3B2-216ENST00000534765 ZNF861PO60384 105 aa5.32□□□□□ -1.56
SF3B2-216ENST00000534765 IGLV5-52A0A0A0MRZ9 124 aa5.31□□□□□ -1.56
SF3B2-216ENST00000534765 KRTAP17-1Q9BYP8 105 aa5.31□□□□□ -1.56
SF3B2-216ENST00000534765 PSORS1C2Q9UIG4 136 aa5.31□□□□□ -1.56
SF3B2-216ENST00000534765 Q5W150 140 aa5.31□□□□□ -1.56
SF3B2-216ENST00000534765 KIAA1109Q2LD37 5005 aa5.3□□□□□ -1.56
SF3B2-216ENST00000534765 C14orf177Q52M58 125 aa5.3□□□□□ -1.56
SF3B2-216ENST00000534765 MYCBP2O75592 4640 aa5.29□□□□□ -1.56
SF3B2-216ENST00000534765 A8MUU9 505 aa5.28□□□□□ -1.56
SF3B2-216ENST00000534765 Q8N1X5 172 aa5.27□□□□□ -1.57
SF3B2-216ENST00000534765 Q6ZSA8 131 aa5.26□□□□□ -1.57
SF3B2-216ENST00000534765 TNXBP22105 4242 aa5.25□□□□□ -1.57
SF3B2-216ENST00000534765 KRTAP16-1A8MUX0 517 aa5.25□□□□□ -1.57
SF3B2-216ENST00000534765 DMAC1Q96GE9 116 aa5.24□□□□□ -1.57
SF3B2-216ENST00000534765 A0A1B0GVY2 172 aa5.24□□□□□ -1.57
SF3B2-216ENST00000534765 RYR1P21817 5038 aa5.24□□□□□ -1.57
SF3B2-216ENST00000534765 IGLV7-43P04211 117 aa5.23□□□□□ -1.57
SF3B2-216ENST00000534765 P0C880 135 aa5.21□□□□□ -1.58
SF3B2-216ENST00000534765 SMR3BP02814 79 aaPredicted RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms