RNA–Protein interactions for RNA: ENST00000530727.5

PTPRC-214, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 1,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-214ENST00000530727 SPCS1Q9Y6A9 102 aa2.43□□□□□ -2.02
PTPRC-214ENST00000530727 LRP1BQ9NZR2 4599 aa2.42□□□□□ -2.02
PTPRC-214ENST00000530727 OBSCNQ5VST9 7968 aa2.42□□□□□ -2.02
PTPRC-214ENST00000530727 H7C2G1 150 aa2.42□□□□□ -2.02
PTPRC-214ENST00000530727 LINC01600Q96MT4 127 aa2.42□□□□□ -2.02
PTPRC-214ENST00000530727 TRBV20-1A0A075B6N2 111 aa2.41□□□□□ -2.02
PTPRC-214ENST00000530727 RYR3Q15413 4870 aa2.41□□□□□ -2.02
PTPRC-214ENST00000530727 C1orf134Q5TEV5 83 aa2.41□□□□□ -2.02
PTPRC-214ENST00000530727 GTF2H5Q6ZYL4 71 aa2.41□□□□□ -2.02
PTPRC-214ENST00000530727 A0A096LNI7 61 aa2.41□□□□□ -2.02
PTPRC-214ENST00000530727 TRBV10-3A0A0K0K1G6 114 aa2.41□□□□□ -2.02
PTPRC-214ENST00000530727 NCR3O14931 201 aa2.41□□□□□ -2.02
PTPRC-214ENST00000530727 DYNC1H1Q14204 4646 aaKnown RBP2.4□□□□□ -2.02
PTPRC-214ENST00000530727 A0A1W2PNN7 141 aa2.4□□□□□ -2.02
PTPRC-214ENST00000530727 COX6CP09669 75 aa2.4□□□□□ -2.02
PTPRC-214ENST00000530727 KRTAP10-8P60410 259 aa2.4□□□□□ -2.02
PTPRC-214ENST00000530727 CLEC2BQ92478 149 aa2.4□□□□□ -2.02
PTPRC-214ENST00000530727 DPH3Q96FX2 82 aa2.4□□□□□ -2.02
PTPRC-214ENST00000530727 KCNQ1DNQ9H478 68 aa2.4□□□□□ -2.02
PTPRC-214ENST00000530727 LCE6AA0A183 80 aa2.4□□□□□ -2.03
PTPRC-214ENST00000530727 F8W1H4 67 aa2.4□□□□□ -2.03
PTPRC-214ENST00000530727 H0YGX0 51 aa2.4□□□□□ -2.03
PTPRC-214ENST00000530727 TRACP01848 142 aa2.4□□□□□ -2.03
PTPRC-214ENST00000530727 SPRR1AP35321 89 aa2.4□□□□□ -2.03
PTPRC-214ENST00000530727 FUSP35637 526 aaKnown RBP eCLIP2.4□□□□□ -2.03
PTPRC-214ENST00000530727 ATXN8Q156A1 80 aa2.4□□□□□ -2.03
PTPRC-214ENST00000530727 KRTAP4-3Q9BYR4 195 aa2.4□□□□□ -2.03
PTPRC-214ENST00000530727 C22orf24Q9Y442 160 aa2.4□□□□□ -2.03
PTPRC-214ENST00000530727 TRAV23DV6A0A075B6W5 121 aa2.39□□□□□ -2.03
PTPRC-214ENST00000530727 S100A7L2Q5SY68 101 aa2.39□□□□□ -2.03
PTPRC-214ENST00000530727 SPACA4Q8TDM5 124 aa2.39□□□□□ -2.03
PTPRC-214ENST00000530727 VPS13BQ7Z7G8 4022 aa2.39□□□□□ -2.03
PTPRC-214ENST00000530727 APOBP04114 4563 aaKnown RBP2.39□□□□□ -2.03
PTPRC-214ENST00000530727 ELOF1P60002 83 aaKnown RBP2.38□□□□□ -2.03
PTPRC-214ENST00000530727 TMEM258P61165 79 aa2.38□□□□□ -2.03
PTPRC-214ENST00000530727 LINC00575Q6W349 94 aa2.38□□□□□ -2.03
PTPRC-214ENST00000530727 Q6ZQT0 140 aa2.38□□□□□ -2.03
PTPRC-214ENST00000530727 IGKV2-24A0A0C4DH68 120 aa2.38□□□□□ -2.03
PTPRC-214ENST00000530727 LINC00474Q9P2X8 69 aa2.38□□□□□ -2.03
PTPRC-214ENST00000530727 ETDBQ3ZM63 59 aa2.37□□□□□ -2.03
PTPRC-214ENST00000530727 Q6ZSA8 131 aa2.37□□□□□ -2.03
PTPRC-214ENST00000530727 PLAC8Q9NZF1 115 aa2.37□□□□□ -2.03
PTPRC-214ENST00000530727 R4GN34 69 aa2.37□□□□□ -2.03
PTPRC-214ENST00000530727 ROMO1P60602 79 aa2.36□□□□□ -2.03
PTPRC-214ENST00000530727 SPINT4Q6UDR6 99 aa2.36□□□□□ -2.03
PTPRC-214ENST00000530727 Q9BRP9 147 aa2.36□□□□□ -2.03
PTPRC-214ENST00000530727 hADV29S1A0JD25 119 aa2.36□□□□□ -2.03
PTPRC-214ENST00000530727 BAALC-AS2P0C853 105 aa2.36□□□□□ -2.03
PTPRC-214ENST00000530727 COX7BP24311 80 aa2.36□□□□□ -2.03
PTPRC-214ENST00000530727 Q6ZRX8 168 aa2.36□□□□□ -2.03
PTPRC-214ENST00000530727 OBSCN-AS1Q96MR7 158 aa2.36□□□□□ -2.03
PTPRC-214ENST00000530727 FAT1Q14517 4588 aa2.36□□□□□ -2.03
PTPRC-214ENST00000530727 KRTAP10-1P60331 282 aa2.35□□□□□ -2.03
PTPRC-214ENST00000530727 KRTAP13-1Q8IUC0 172 aa2.35□□□□□ -2.03
PTPRC-214ENST00000530727 HIGD2AQ9BW72 106 aa2.35□□□□□ -2.03
PTPRC-214ENST00000530727 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.34□□□□□ -2.03
PTPRC-214ENST00000530727 Q6ZQY7 126 aa2.34□□□□□ -2.03
PTPRC-214ENST00000530727 ORMDL1Q9P0S3 153 aa2.34□□□□□ -2.03
PTPRC-214ENST00000530727 IGLV5-48A0A075B6I7 105 aa2.34□□□□□ -2.04
PTPRC-214ENST00000530727 TEX49A0A1B0GTD5 131 aa2.34□□□□□ -2.04
PTPRC-214ENST00000530727 ERC2-IT1O76042 136 aa2.34□□□□□ -2.04
PTPRC-214ENST00000530727 DNAL4O96015 105 aa2.34□□□□□ -2.04
PTPRC-214ENST00000530727 Q8N9L7 120 aa2.34□□□□□ -2.04
PTPRC-214ENST00000530727 C20orf166-AS1Q96NR2 134 aa2.34□□□□□ -2.04
PTPRC-214ENST00000530727 HSPG2P98160 4391 aa2.33□□□□□ -2.04
PTPRC-214ENST00000530727 ETDCA0A1B0GVM5 59 aa2.33□□□□□ -2.04
PTPRC-214ENST00000530727 hDV103S1A0JD37 113 aa2.33□□□□□ -2.04
PTPRC-214ENST00000530727 PPDPFLQ8WWR9 84 aa2.33□□□□□ -2.04
PTPRC-214ENST00000530727 A6NN06 94 aa2.32□□□□□ -2.04
PTPRC-214ENST00000530727 BCE1O60756 84 aa2.32□□□□□ -2.04
PTPRC-214ENST00000530727 PSORS1C2Q9UIG4 136 aa2.32□□□□□ -2.04
PTPRC-214ENST00000530727 SNCGO76070 127 aa2.32□□□□□ -2.04
PTPRC-214ENST00000530727 PRLHP81277 87 aa2.32□□□□□ -2.04
PTPRC-214ENST00000530727 C14orf132Q9NPU4 83 aa2.32□□□□□ -2.04
PTPRC-214ENST00000530727 PKHD1L1Q86WI1 4243 aa2.31□□□□□ -2.04
PTPRC-214ENST00000530727 EPPK1P58107 5090 aaKnown RBP2.31□□□□□ -2.04
PTPRC-214ENST00000530727 SPRR1BP22528 89 aa2.31□□□□□ -2.04
PTPRC-214ENST00000530727 C9orf153Q5TBE3 101 aa2.31□□□□□ -2.04
PTPRC-214ENST00000530727 TRBV7-4A0A0J9YYF1 115 aa2.3□□□□□ -2.04
PTPRC-214ENST00000530727 A0A1W2PNM2 257 aa2.3□□□□□ -2.04
PTPRC-214ENST00000530727 JMJD7-PLA2G4BH0Y9G9 81 aa2.3□□□□□ -2.04
PTPRC-214ENST00000530727 RYR1P21817 5038 aa2.3□□□□□ -2.04
PTPRC-214ENST00000530727 LOC110117498A0A087WWA1 95 aa2.3□□□□□ -2.04
PTPRC-214ENST00000530727 HRES1P13985 223 aa2.3□□□□□ -2.04
PTPRC-214ENST00000530727 SERP1Q9Y6X1 66 aa2.3□□□□□ -2.04
PTPRC-214ENST00000530727 CCKP06307 115 aa2.29□□□□□ -2.04
PTPRC-214ENST00000530727 HAMPP81172 84 aa2.29□□□□□ -2.04
PTPRC-214ENST00000530727 RBM3P98179 157 aaKnown RBP2.29□□□□□ -2.04
PTPRC-214ENST00000530727 C1orf137Q5JT78 98 aa2.29□□□□□ -2.04
PTPRC-214ENST00000530727 ATP11AUNQ6ZP68 121 aa2.29□□□□□ -2.04
PTPRC-214ENST00000530727 KRTAP10-4P60372 401 aaPredicted RBP2.29□□□□□ -2.04
PTPRC-214ENST00000530727 ASB16-AS1Q495Z4 193 aa2.29□□□□□ -2.04
PTPRC-214ENST00000530727 DEFB105AQ8NG35 78 aa2.29□□□□□ -2.04
PTPRC-214ENST00000530727 KIAA1109Q2LD37 5005 aa2.29□□□□□ -2.04
PTPRC-214ENST00000530727 ACYP1P07311 99 aa2.28□□□□□ -2.04
PTPRC-214ENST00000530727 MOBPQ13875 183 aa2.28□□□□□ -2.04
PTPRC-214ENST00000530727 SPRR4Q96PI1 79 aa2.28□□□□□ -2.04
PTPRC-214ENST00000530727 PDE6GP18545 87 aa2.27□□□□□ -2.05
PTPRC-214ENST00000530727 FP248Q71RG6 208 aaPredicted RBP2.27□□□□□ -2.05
PTPRC-214ENST00000530727 TMEM254Q8TBM7 123 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms