RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 SPINK7P58062 85 aa4.27□□□□□ -1.73
TGFBR3-207ENST00000525962 Q8N1X5 172 aa4.26□□□□□ -1.73
TGFBR3-207ENST00000525962 A0A087X002 238 aa4.26□□□□□ -1.73
TGFBR3-207ENST00000525962 MMP24-AS1A0A0U1RRL7 71 aa4.26□□□□□ -1.73
TGFBR3-207ENST00000525962 NOTCH2NLQ7Z3S9 236 aa4.26□□□□□ -1.73
TGFBR3-207ENST00000525962 SPANXA2-OT1Q8N9U9 137 aa4.26□□□□□ -1.73
TGFBR3-207ENST00000525962 IGLV5-37A0A075B6J1 123 aa4.25□□□□□ -1.73
TGFBR3-207ENST00000525962 ZNF861PO60384 105 aa4.25□□□□□ -1.73
TGFBR3-207ENST00000525962 MIR22HGQ0VDD5 57 aa4.24□□□□□ -1.73
TGFBR3-207ENST00000525962 IGLV7-46A0A075B6I9 117 aa4.24□□□□□ -1.73
TGFBR3-207ENST00000525962 Q75L30 129 aa4.24□□□□□ -1.73
TGFBR3-207ENST00000525962 LINC00472Q9H8W2 130 aa4.24□□□□□ -1.73
TGFBR3-207ENST00000525962 A0A087WTM6 91 aa4.24□□□□□ -1.73
TGFBR3-207ENST00000525962 UQCR11O14957 56 aa4.24□□□□□ -1.73
TGFBR3-207ENST00000525962 FAM229AH3BQW9 127 aa4.23□□□□□ -1.73
TGFBR3-207ENST00000525962 HRES1P13985 223 aa4.23□□□□□ -1.73
TGFBR3-207ENST00000525962 C9orf92A6NGG3 77 aa4.22□□□□□ -1.73
TGFBR3-207ENST00000525962 PLA2G1BP04054 148 aaKnown RBP4.22□□□□□ -1.73
TGFBR3-207ENST00000525962 TYMSOSQ8TAI1 123 aa4.22□□□□□ -1.73
TGFBR3-207ENST00000525962 ZCCHC13Q8WW36 166 aaKnown RBP4.22□□□□□ -1.73
TGFBR3-207ENST00000525962 APLNQ9ULZ1 77 aa4.22□□□□□ -1.73
TGFBR3-207ENST00000525962 SMR3BP02814 79 aaPredicted RBP4.21□□□□□ -1.73
TGFBR3-207ENST00000525962 A6NN06 94 aa4.21□□□□□ -1.74
TGFBR3-207ENST00000525962 SSBP3-AS1Q7Z2R9 100 aa4.2□□□□□ -1.74
TGFBR3-207ENST00000525962 KRTAP29-1A8MX34 341 aaPredicted RBP4.19□□□□□ -1.74
TGFBR3-207ENST00000525962 FBN3Q75N90 2809 aa4.19□□□□□ -1.74
TGFBR3-207ENST00000525962 CRIPTQ9P021 101 aa4.19□□□□□ -1.74
TGFBR3-207ENST00000525962 IGLV7-43P04211 117 aa4.18□□□□□ -1.74
TGFBR3-207ENST00000525962 Q5W150 140 aa4.17□□□□□ -1.74
TGFBR3-207ENST00000525962 LINC01558Q9Y6Z2 57 aa4.16□□□□□ -1.74
TGFBR3-207ENST00000525962 ADM2Q7Z4H4 148 aa4.16□□□□□ -1.74
TGFBR3-207ENST00000525962 A0A0D9SG42 100 aa4.15□□□□□ -1.75
TGFBR3-207ENST00000525962 WWC2-AS2Q96NR7 200 aa4.14□□□□□ -1.75
TGFBR3-207ENST00000525962 SPINT4Q6UDR6 99 aa4.13□□□□□ -1.75
TGFBR3-207ENST00000525962 CSAG1Q6PB30 78 aa4.12□□□□□ -1.75
TGFBR3-207ENST00000525962 LCE6AA0A183 80 aa4.12□□□□□ -1.75
TGFBR3-207ENST00000525962 SPRR1BP22528 89 aa4.12□□□□□ -1.75
TGFBR3-207ENST00000525962 ASB16-AS1Q495Z4 193 aa4.1□□□□□ -1.75
TGFBR3-207ENST00000525962 LINC00304Q8N9R0 145 aa4.08□□□□□ -1.76
TGFBR3-207ENST00000525962 KRTAP10-2P60368 255 aa4.08□□□□□ -1.76
TGFBR3-207ENST00000525962 DNHD1Q96M86 4753 aa4.06□□□□□ -1.76
TGFBR3-207ENST00000525962 MEGF8Q7Z7M0 2845 aa4.05□□□□□ -1.76
TGFBR3-207ENST00000525962 DYNC2H1Q8NCM8 4307 aaKnown RBP4.05□□□□□ -1.76
TGFBR3-207ENST00000525962 Q6ZR54 194 aa4.04□□□□□ -1.76
TGFBR3-207ENST00000525962 A0A1B0GU33 70 aa4.04□□□□□ -1.76
TGFBR3-207ENST00000525962 LYSTQ99698 3801 aa4.04□□□□□ -1.76
TGFBR3-207ENST00000525962 PLAC8Q9NZF1 115 aa4.03□□□□□ -1.76
TGFBR3-207ENST00000525962 DNAH7Q8WXX0 4024 aa4.03□□□□□ -1.76
TGFBR3-207ENST00000525962 Q6ZRN7 208 aaPredicted RBP4.01□□□□□ -1.77
TGFBR3-207ENST00000525962 KRTAP10-1P60331 282 aa4.01□□□□□ -1.77
TGFBR3-207ENST00000525962 SPATA8Q6RVD6 105 aa4.01□□□□□ -1.77
TGFBR3-207ENST00000525962 DMAC1Q96GE9 116 aa4.01□□□□□ -1.77
TGFBR3-207ENST00000525962 KRTAP13-1Q8IUC0 172 aa4□□□□□ -1.77
TGFBR3-207ENST00000525962 LINC00483Q53H64 154 aa3.98□□□□□ -1.77
TGFBR3-207ENST00000525962 KRTAP13-2Q52LG2 175 aa3.96□□□□□ -1.78
TGFBR3-207ENST00000525962 A0A0A0MQY5 61 aa3.95□□□□□ -1.78
TGFBR3-207ENST00000525962 PRKDCP78527 4128 aaKnown RBP3.94□□□□□ -1.78
TGFBR3-207ENST00000525962 DNAH1Q9P2D7 4330 aa3.93□□□□□ -1.78
TGFBR3-207ENST00000525962 DNAH10Q8IVF4 4471 aa3.93□□□□□ -1.78
TGFBR3-207ENST00000525962 ROMO1P60602 79 aa3.92□□□□□ -1.78
TGFBR3-207ENST00000525962 DNAH6Q9C0G6 4158 aa3.92□□□□□ -1.78
TGFBR3-207ENST00000525962 HUWE1Q7Z6Z7 4374 aaKnown RBP3.92□□□□□ -1.78
TGFBR3-207ENST00000525962 KRTAP16-1A8MUX0 517 aa3.88□□□□□ -1.79
TGFBR3-207ENST00000525962 DNAH9Q9NYC9 4486 aa3.88□□□□□ -1.79
TGFBR3-207ENST00000525962 FRAS1Q86XX4 4008 aa3.87□□□□□ -1.79
TGFBR3-207ENST00000525962 H1FX-AS1Q4G0G2 97 aa3.87□□□□□ -1.79
TGFBR3-207ENST00000525962 KRTAP25-1Q3LHN0 102 aa3.86□□□□□ -1.79
TGFBR3-207ENST00000525962 PLECQ15149 4684 aaKnown RBP3.86□□□□□ -1.79
TGFBR3-207ENST00000525962 STARD9Q9P2P6 4700 aa3.84□□□□□ -1.79
TGFBR3-207ENST00000525962 RPL37P61927 97 aaKnown RBP3.84□□□□□ -1.8
TGFBR3-207ENST00000525962 Q6ZSA8 131 aa3.82□□□□□ -1.8
TGFBR3-207ENST00000525962 S4R3F8 94 aa3.8□□□□□ -1.8
TGFBR3-207ENST00000525962 COX6B2Q6YFQ2 88 aa3.8□□□□□ -1.8
TGFBR3-207ENST00000525962 KMT2AQ03164 3969 aa3.79□□□□□ -1.8
TGFBR3-207ENST00000525962 H0YAA0 97 aa3.79□□□□□ -1.8
TGFBR3-207ENST00000525962 KRTAP1-4P0C5Y4 121 aa3.79□□□□□ -1.8
TGFBR3-207ENST00000525962 KRTAP13-3Q3SY46 172 aa3.79□□□□□ -1.8
TGFBR3-207ENST00000525962 C10orf95Q9H7T3 257 aa3.78□□□□□ -1.8
TGFBR3-207ENST00000525962 NDUFAF8A1L188 74 aa3.77□□□□□ -1.81
TGFBR3-207ENST00000525962 A8MUU9 505 aa3.77□□□□□ -1.81
TGFBR3-207ENST00000525962 LUZP6Q538Z0 58 aa3.76□□□□□ -1.81
TGFBR3-207ENST00000525962 CAMK2N1Q7Z7J9 78 aa3.75□□□□□ -1.81
TGFBR3-207ENST00000525962 R4GN34 69 aa3.74□□□□□ -1.81
TGFBR3-207ENST00000525962 DNAH2Q9P225 4427 aa3.74□□□□□ -1.81
TGFBR3-207ENST00000525962 J3QL48 77 aa3.74□□□□□ -1.81
TGFBR3-207ENST00000525962 HYDINQ4G0P3 5121 aa3.73□□□□□ -1.81
TGFBR3-207ENST00000525962 C20orf166-AS1Q96NR2 134 aa3.73□□□□□ -1.81
TGFBR3-207ENST00000525962 VPS13DQ5THJ4 4388 aa3.73□□□□□ -1.81
TGFBR3-207ENST00000525962 M0QZ58 72 aa3.72□□□□□ -1.81
TGFBR3-207ENST00000525962 Q5VSD8 79 aa3.71□□□□□ -1.82
TGFBR3-207ENST00000525962 ALMS1Q8TCU4 4167 aa3.71□□□□□ -1.82
TGFBR3-207ENST00000525962 DNAH11Q96DT5 4516 aa3.7□□□□□ -1.82
TGFBR3-207ENST00000525962 HECTD4Q9Y4D8 3996 aa3.7□□□□□ -1.82
TGFBR3-207ENST00000525962 DNAH8Q96JB1 4490 aa3.68□□□□□ -1.82
TGFBR3-207ENST00000525962 PKD1P98161 4303 aa3.68□□□□□ -1.82
TGFBR3-207ENST00000525962 PKHD1L1Q86WI1 4243 aa3.67□□□□□ -1.82
TGFBR3-207ENST00000525962 FAT2Q9NYQ8 4349 aa3.66□□□□□ -1.82
TGFBR3-207ENST00000525962 DNAH17Q9UFH2 4485 aa3.66□□□□□ -1.82
TGFBR3-207ENST00000525962 P0C880 135 aa3.65□□□□□ -1.82
TGFBR3-207ENST00000525962 KRTAP21-3Q3LHN1 58 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms