RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 MRPL35Q9NZE8 188 aaKnown RBP2.04□□□□□ -2.08
CPNE3-206ENST00000523469 LOC107984156A0A0G2JMH3 177 aa2.03□□□□□ -2.08
CPNE3-206ENST00000523469 HSD52Q0P140 79 aa2.03□□□□□ -2.08
CPNE3-206ENST00000523469 ARL17AQ8IVW1 177 aa2.03□□□□□ -2.08
CPNE3-206ENST00000523469 TIMM21Q9BVV7 248 aa2.03□□□□□ -2.08
CPNE3-206ENST00000523469 SEC11CQ9BY50 192 aa2.03□□□□□ -2.08
CPNE3-206ENST00000523469 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.02□□□□□ -2.09
CPNE3-206ENST00000523469 A0A0G2JQZ4 141 aa2.02□□□□□ -2.09
CPNE3-206ENST00000523469 IGKV2-29A2NJV5 120 aaPredicted RBP2.02□□□□□ -2.09
CPNE3-206ENST00000523469 ERC2-IT1O76042 136 aa2.02□□□□□ -2.09
CPNE3-206ENST00000523469 SPANXN1Q5VSR9 72 aa2.02□□□□□ -2.09
CPNE3-206ENST00000523469 SMIM7Q9BQ49 75 aa2.02□□□□□ -2.09
CPNE3-206ENST00000523469 C22orf24Q9Y442 160 aa2.02□□□□□ -2.09
CPNE3-206ENST00000523469 SPRR2EP22531 72 aa2.01□□□□□ -2.09
CPNE3-206ENST00000523469 SPRR2BP35325 72 aa2.01□□□□□ -2.09
CPNE3-206ENST00000523469 SPRR2AP35326 72 aa2.01□□□□□ -2.09
CPNE3-206ENST00000523469 CASC2Q6XLA1 102 aa2.01□□□□□ -2.09
CPNE3-206ENST00000523469 C5orf38Q86SI9 138 aa2.01□□□□□ -2.09
CPNE3-206ENST00000523469 OR10AG1Q8NH19 301 aa2.01□□□□□ -2.09
CPNE3-206ENST00000523469 C6orf48Q9UBA6 75 aa2.01□□□□□ -2.09
CPNE3-206ENST00000523469 SERP1Q9Y6X1 66 aa2.01□□□□□ -2.09
CPNE3-206ENST00000523469 PRLHP81277 87 aa2□□□□□ -2.09
CPNE3-206ENST00000523469 MRPL54Q6P161 138 aaKnown RBP2□□□□□ -2.09
CPNE3-206ENST00000523469 C2orf82Q6UX34 121 aa2□□□□□ -2.09
CPNE3-206ENST00000523469 UNQ6190/PRO20217Q6UXQ8 127 aa2□□□□□ -2.09
CPNE3-206ENST00000523469 C5orf17Q8NAS9 161 aa2□□□□□ -2.09
CPNE3-206ENST00000523469 M0QY20 66 aa1.99□□□□□ -2.09
CPNE3-206ENST00000523469 SFT2D2O95562 160 aa1.99□□□□□ -2.09
CPNE3-206ENST00000523469 RPS29P62273 56 aaKnown RBP1.99□□□□□ -2.09
CPNE3-206ENST00000523469 SSBP1Q04837 148 aaKnown RBP1.99□□□□□ -2.09
CPNE3-206ENST00000523469 MIR22HGQ0VDD5 57 aa1.99□□□□□ -2.09
CPNE3-206ENST00000523469 Q1T7F1 81 aa1.99□□□□□ -2.09
CPNE3-206ENST00000523469 ARL2-SNX15V9GYD0 113 aa1.99□□□□□ -2.09
CPNE3-206ENST00000523469 MPC2O95563 127 aa1.98□□□□□ -2.09
CPNE3-206ENST00000523469 SPINK8P0C7L1 97 aa1.98□□□□□ -2.09
CPNE3-206ENST00000523469 RPL37P61927 97 aaKnown RBP1.98□□□□□ -2.09
CPNE3-206ENST00000523469 Q86TA4 180 aa1.98□□□□□ -2.09
CPNE3-206ENST00000523469 TRBV30A0A0K0K1B3 111 aa1.97□□□□□ -2.09
CPNE3-206ENST00000523469 IFITM1P13164 125 aa1.97□□□□□ -2.09
CPNE3-206ENST00000523469 ADCYAP1P18509 176 aa1.97□□□□□ -2.09
CPNE3-206ENST00000523469 PYY3Q5JQD4 70 aa1.97□□□□□ -2.09
CPNE3-206ENST00000523469 SVBPQ8N300 66 aa1.97□□□□□ -2.09
CPNE3-206ENST00000523469 FAUP35544 74 aaKnown RBP1.96□□□□□ -2.1
CPNE3-206ENST00000523469 C9orf153Q5TBE3 101 aa1.96□□□□□ -2.1
CPNE3-206ENST00000523469 SMIM4Q8WVI0 70 aa1.96□□□□□ -2.1
CPNE3-206ENST00000523469 SPRR4Q96PI1 79 aa1.96□□□□□ -2.1
CPNE3-206ENST00000523469 CDC42SE2Q9NRR3 84 aa1.96□□□□□ -2.1
CPNE3-206ENST00000523469 TMEM242Q9NWH2 141 aa1.96□□□□□ -2.1
CPNE3-206ENST00000523469 NDUFB6O95139 128 aa1.95□□□□□ -2.1
CPNE3-206ENST00000523469 ARL14EPLP0DKL9 152 aa1.95□□□□□ -2.1
CPNE3-206ENST00000523469 SPRR2DP22532 72 aa1.95□□□□□ -2.1
CPNE3-206ENST00000523469 CRIP1P50238 77 aa1.95□□□□□ -2.1
CPNE3-206ENST00000523469 UBE2G1P62253 170 aa1.95□□□□□ -2.1
CPNE3-206ENST00000523469 MED9Q9NWA0 146 aa1.95□□□□□ -2.1
CPNE3-206ENST00000523469 HMCN1Q96RW7 5635 aa1.95□□□□□ -2.1
CPNE3-206ENST00000523469 SNCGO76070 127 aa1.94□□□□□ -2.1
CPNE3-206ENST00000523469 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.94□□□□□ -2.1
CPNE3-206ENST00000523469 SPRR2FQ96RM1 72 aa1.94□□□□□ -2.1
CPNE3-206ENST00000523469 VAMP8Q9BV40 100 aa1.94□□□□□ -2.1
CPNE3-206ENST00000523469 FXYD6-FXYD2A0A087WZ82 144 aa1.93□□□□□ -2.1
CPNE3-206ENST00000523469 LIMD2Q9BT23 127 aa1.93□□□□□ -2.1
CPNE3-206ENST00000523469 PRO1933Q9H354 126 aa1.93□□□□□ -2.1
CPNE3-206ENST00000523469 C7orf77A4D0Y5 90 aa1.92□□□□□ -2.1
CPNE3-206ENST00000523469 I3L3M4 83 aa1.92□□□□□ -2.1
CPNE3-206ENST00000523469 GCHFRP30047 84 aa1.92□□□□□ -2.1
CPNE3-206ENST00000523469 NPC2P61916 151 aa1.92□□□□□ -2.1
CPNE3-206ENST00000523469 RPL39LQ96EH5 51 aaKnown RBP1.92□□□□□ -2.1
CPNE3-206ENST00000523469 ORMDL1Q9P0S3 153 aa1.92□□□□□ -2.1
CPNE3-206ENST00000523469 F8W1H4 67 aa1.91□□□□□ -2.1
CPNE3-206ENST00000523469 COX7CP15954 63 aa1.91□□□□□ -2.1
CPNE3-206ENST00000523469 SSBP3-AS1Q7Z2R9 100 aa1.91□□□□□ -2.1
CPNE3-206ENST00000523469 Q8N8P6 123 aa1.91□□□□□ -2.1
CPNE3-206ENST00000523469 PPDPFLQ8WWR9 84 aa1.91□□□□□ -2.1
CPNE3-206ENST00000523469 TMEM141Q96I45 108 aa1.91□□□□□ -2.1
CPNE3-206ENST00000523469 TMEM167BQ9NRX6 74 aa1.91□□□□□ -2.1
CPNE3-206ENST00000523469 TOMM7Q9P0U1 55 aa1.91□□□□□ -2.1
CPNE3-206ENST00000523469 IL7P13232 177 aa1.9□□□□□ -2.11
CPNE3-206ENST00000523469 FCER1GP30273 86 aa1.9□□□□□ -2.11
CPNE3-206ENST00000523469 TOMM5Q8N4H5 51 aa1.9□□□□□ -2.11
CPNE3-206ENST00000523469 DSCR8Q96T75 97 aa1.9□□□□□ -2.11
CPNE3-206ENST00000523469 AHNAK2Q8IVF2 5795 aa1.89□□□□□ -2.11
CPNE3-206ENST00000523469 ATP5EP56381 51 aaPredicted RBP1.88□□□□□ -2.11
CPNE3-206ENST00000523469 PEA15Q15121 130 aa1.88□□□□□ -2.11
CPNE3-206ENST00000523469 S100A7L2Q5SY68 101 aa1.88□□□□□ -2.11
CPNE3-206ENST00000523469 ST20Q9HBF5 79 aa1.88□□□□□ -2.11
CPNE3-206ENST00000523469 F2Z2F3 143 aa1.87□□□□□ -2.11
CPNE3-206ENST00000523469 H3BRM9 83 aa1.87□□□□□ -2.11
CPNE3-206ENST00000523469 IGKCP01834 107 aa1.87□□□□□ -2.11
CPNE3-206ENST00000523469 MT-ATP8P03928 68 aa1.87□□□□□ -2.11
CPNE3-206ENST00000523469 RBM3P98179 157 aaKnown RBP1.87□□□□□ -2.11
CPNE3-206ENST00000523469 RPL7L1Q6DKI1 246 aaKnown RBP1.87□□□□□ -2.11
CPNE3-206ENST00000523469 CSAG1Q6PB30 78 aa1.87□□□□□ -2.11
CPNE3-206ENST00000523469 LINC00299Q6ZSB3 139 aa1.87□□□□□ -2.11
CPNE3-206ENST00000523469 F8VRH5 84 aa1.86□□□□□ -2.11
CPNE3-206ENST00000523469 K7EP34 96 aa1.86□□□□□ -2.11
CPNE3-206ENST00000523469 COA5Q86WW8 74 aa1.86□□□□□ -2.11
CPNE3-206ENST00000523469 CDC42SE1Q9NRR8 79 aa1.86□□□□□ -2.11
CPNE3-206ENST00000523469 DSTQ03001 7570 aaKnown RBP1.86□□□□□ -2.11
CPNE3-206ENST00000523469 TRBV6-5A0A0K0K1A5 114 aa1.85□□□□□ -2.11
CPNE3-206ENST00000523469 BAGE2Q86Y30 109 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms