RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 DSCR8Q96T75 97 aa1.26□□□□□ -2.21
HMGN1P28-201ENST00000521340 UBL5Q9BZL1 73 aa1.26□□□□□ -2.21
HMGN1P28-201ENST00000521340 C6orf48Q9UBA6 75 aa1.26□□□□□ -2.21
HMGN1P28-201ENST00000521340 NBPF19A0A087WUL8 3843 aa1.26□□□□□ -2.21
HMGN1P28-201ENST00000521340 ITPR2Q14571 2701 aa1.25□□□□□ -2.21
HMGN1P28-201ENST00000521340 ATRQ13535 2644 aa1.25□□□□□ -2.21
HMGN1P28-201ENST00000521340 TEP1Q99973 2627 aaKnown RBP1.25□□□□□ -2.21
HMGN1P28-201ENST00000521340 F8P00451 2351 aa1.25□□□□□ -2.21
HMGN1P28-201ENST00000521340 NF1P21359 2839 aa1.25□□□□□ -2.21
HMGN1P28-201ENST00000521340 A0A096LPF7 62 aa1.25□□□□□ -2.21
HMGN1P28-201ENST00000521340 ERC2-IT1O76042 136 aa1.25□□□□□ -2.21
HMGN1P28-201ENST00000521340 ANGP03950 147 aaKnown RBP1.25□□□□□ -2.21
HMGN1P28-201ENST00000521340 MIFP14174 115 aa1.25□□□□□ -2.21
HMGN1P28-201ENST00000521340 COX7BP24311 80 aa1.25□□□□□ -2.21
HMGN1P28-201ENST00000521340 ATP5EP56381 51 aaPredicted RBP1.25□□□□□ -2.21
HMGN1P28-201ENST00000521340 RBM3P98179 157 aaKnown RBP1.25□□□□□ -2.21
HMGN1P28-201ENST00000521340 Q1T7F1 81 aa1.25□□□□□ -2.21
HMGN1P28-201ENST00000521340 UNQ6190/PRO20217Q6UXQ8 127 aa1.25□□□□□ -2.21
HMGN1P28-201ENST00000521340 LCA10Q71F78 164 aa1.25□□□□□ -2.21
HMGN1P28-201ENST00000521340 C20orf197Q8N268 126 aa1.25□□□□□ -2.21
HMGN1P28-201ENST00000521340 SERP1Q9Y6X1 66 aa1.25□□□□□ -2.21
HMGN1P28-201ENST00000521340 NIPBLQ6KC79 2804 aaeCLIP1.25□□□□□ -2.21
HMGN1P28-201ENST00000521340 CUBNO60494 3623 aa1.24□□□□□ -2.21
HMGN1P28-201ENST00000521340 TRAV10A0A0B4J240 114 aa1.24□□□□□ -2.21
HMGN1P28-201ENST00000521340 LCE6AA0A183 80 aa1.24□□□□□ -2.21
HMGN1P28-201ENST00000521340 H3BNG1 76 aa1.24□□□□□ -2.21
HMGN1P28-201ENST00000521340 DEFB4AO15263 64 aa1.24□□□□□ -2.21
HMGN1P28-201ENST00000521340 NREPQ16612 68 aa1.24□□□□□ -2.21
HMGN1P28-201ENST00000521340 C7orf65Q6ZTY9 151 aa1.24□□□□□ -2.21
HMGN1P28-201ENST00000521340 WFDC10BQ8IUB3 73 aa1.24□□□□□ -2.21
HMGN1P28-201ENST00000521340 LAMTOR3Q9UHA4 124 aa1.24□□□□□ -2.21
HMGN1P28-201ENST00000521340 HMCN1Q96RW7 5635 aa1.24□□□□□ -2.21
HMGN1P28-201ENST00000521340 DNAH1Q9P2D7 4330 aa1.24□□□□□ -2.21
HMGN1P28-201ENST00000521340 TENM4Q6N022 2769 aa1.23□□□□□ -2.21
HMGN1P28-201ENST00000521340 IGLV5-48A0A075B6I7 105 aa1.23□□□□□ -2.21
HMGN1P28-201ENST00000521340 F8WEM9 126 aa1.23□□□□□ -2.21
HMGN1P28-201ENST00000521340 M0R378 163 aa1.23□□□□□ -2.21
HMGN1P28-201ENST00000521340 NDUFC1O43677 76 aa1.23□□□□□ -2.21
HMGN1P28-201ENST00000521340 SPART-AS1P0CW21 52 aa1.23□□□□□ -2.21
HMGN1P28-201ENST00000521340 SPRR1AP35321 89 aa1.23□□□□□ -2.21
HMGN1P28-201ENST00000521340 LINC01556Q5JQF7 62 aa1.23□□□□□ -2.21
HMGN1P28-201ENST00000521340 Q6ZRX8 168 aa1.23□□□□□ -2.21
HMGN1P28-201ENST00000521340 FP248Q71RG6 208 aaPredicted RBP1.23□□□□□ -2.21
HMGN1P28-201ENST00000521340 TMEM254Q8TBM7 123 aa1.23□□□□□ -2.21
HMGN1P28-201ENST00000521340 KCNQ1DNQ9H478 68 aa1.23□□□□□ -2.21
HMGN1P28-201ENST00000521340 SNURFQ9Y675 71 aa1.23□□□□□ -2.21
HMGN1P28-201ENST00000521340 TENM1Q9UKZ4 2725 aa1.23□□□□□ -2.21
HMGN1P28-201ENST00000521340 VWFP04275 2813 aa1.22□□□□□ -2.21
HMGN1P28-201ENST00000521340 J3QKU1 62 aa1.22□□□□□ -2.21
HMGN1P28-201ENST00000521340 HTN3P15516 51 aa1.22□□□□□ -2.21
HMGN1P28-201ENST00000521340 HAMPP81172 84 aa1.22□□□□□ -2.21
HMGN1P28-201ENST00000521340 HRCT1Q6UXD1 115 aa1.22□□□□□ -2.21
HMGN1P28-201ENST00000521340 COA5Q86WW8 74 aa1.22□□□□□ -2.21
HMGN1P28-201ENST00000521340 SPRR4Q96PI1 79 aa1.22□□□□□ -2.21
HMGN1P28-201ENST00000521340 SMR3AQ99954 134 aa1.22□□□□□ -2.21
HMGN1P28-201ENST00000521340 HECTD1Q9ULT8 2610 aa1.21□□□□□ -2.22
HMGN1P28-201ENST00000521340 STAB1Q9NY15 2570 aa1.21□□□□□ -2.22
HMGN1P28-201ENST00000521340 NBEAL2Q6ZNJ1 2754 aa1.21□□□□□ -2.22
HMGN1P28-201ENST00000521340 DNAH3Q8TD57 4116 aa1.21□□□□□ -2.22
HMGN1P28-201ENST00000521340 hDV103S1A0JD37 113 aa1.21□□□□□ -2.22
HMGN1P28-201ENST00000521340 MAST4O15021 2626 aa1.2□□□□□ -2.22
HMGN1P28-201ENST00000521340 HUWE1Q7Z6Z7 4374 aaKnown RBP1.2□□□□□ -2.22
HMGN1P28-201ENST00000521340 NOTCH1P46531 2555 aa1.2□□□□□ -2.22
HMGN1P28-201ENST00000521340 K7EQZ3 153 aa1.2□□□□□ -2.22
HMGN1P28-201ENST00000521340 ESRGQ1W209 222 aa1.2□□□□□ -2.22
HMGN1P28-201ENST00000521340 C1orf137Q5JT78 98 aa1.2□□□□□ -2.22
HMGN1P28-201ENST00000521340 CYP4F30PQ9H0H9 118 aa1.2□□□□□ -2.22
HMGN1P28-201ENST00000521340 LINC00474Q9P2X8 69 aa1.2□□□□□ -2.22
HMGN1P28-201ENST00000521340 FLNBO75369 2602 aaKnown RBP1.2□□□□□ -2.22
HMGN1P28-201ENST00000521340 STAB2Q8WWQ8 2551 aa1.2□□□□□ -2.22
HMGN1P28-201ENST00000521340 PKD1L1Q8TDX9 2849 aa1.2□□□□□ -2.22
HMGN1P28-201ENST00000521340 OTOGQ6ZRI0 2925 aa1.19□□□□□ -2.22
HMGN1P28-201ENST00000521340 CMYA5Q8N3K9 4069 aa1.19□□□□□ -2.22
HMGN1P28-201ENST00000521340 NBEAL1Q6ZS30 2694 aa1.19□□□□□ -2.22
HMGN1P28-201ENST00000521340 DEFB131BA0A096LNP1 70 aa1.19□□□□□ -2.22
HMGN1P28-201ENST00000521340 ETDCA0A1B0GVM5 59 aa1.19□□□□□ -2.22
HMGN1P28-201ENST00000521340 HCG22E2RYF7 251 aa1.19□□□□□ -2.22
HMGN1P28-201ENST00000521340 SPRR1BP22528 89 aa1.19□□□□□ -2.22
HMGN1P28-201ENST00000521340 CRCT1Q9UGL9 99 aa1.19□□□□□ -2.22
HMGN1P28-201ENST00000521340 A0A096LNI7 61 aa1.18□□□□□ -2.22
HMGN1P28-201ENST00000521340 TRAV22A0A0B4J277 110 aa1.18□□□□□ -2.22
HMGN1P28-201ENST00000521340 CNBPP62633 177 aaKnown RBP1.18□□□□□ -2.22
HMGN1P28-201ENST00000521340 PRLHP81277 87 aa1.18□□□□□ -2.22
HMGN1P28-201ENST00000521340 DEFB105AQ8NG35 78 aa1.18□□□□□ -2.22
HMGN1P28-201ENST00000521340 ANK2Q01484 3957 aa1.17□□□□□ -2.22
HMGN1P28-201ENST00000521340 TENM2Q9NT68 2774 aa1.17□□□□□ -2.22
HMGN1P28-201ENST00000521340 DYNC2H1Q8NCM8 4307 aaKnown RBP1.17□□□□□ -2.22
HMGN1P28-201ENST00000521340 A0A087WSZ3 146 aa1.17□□□□□ -2.22
HMGN1P28-201ENST00000521340 MMP24-AS1A0A0U1RRL7 71 aa1.17□□□□□ -2.22
HMGN1P28-201ENST00000521340 UBE2BP63146 152 aa1.17□□□□□ -2.22
HMGN1P28-201ENST00000521340 ASB16-AS1Q495Z4 193 aa1.17□□□□□ -2.22
HMGN1P28-201ENST00000521340 PRR15Q8IV56 129 aa1.17□□□□□ -2.22
HMGN1P28-201ENST00000521340 BRK1Q8WUW1 75 aa1.17□□□□□ -2.22
HMGN1P28-201ENST00000521340 Q96NJ1 140 aa1.17□□□□□ -2.22
HMGN1P28-201ENST00000521340 AHNAKQ09666 5890 aaKnown RBP1.17□□□□□ -2.22
HMGN1P28-201ENST00000521340 TRRAPQ9Y4A5 3859 aa1.17□□□□□ -2.22
HMGN1P28-201ENST00000521340 H0Y9P7 68 aa1.16□□□□□ -2.22
HMGN1P28-201ENST00000521340 NDUFB1O75438 58 aa1.16□□□□□ -2.22
HMGN1P28-201ENST00000521340 Q5VV11 94 aa1.16□□□□□ -2.22
HMGN1P28-201ENST00000521340 WFDC13Q8IUB5 93 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms