RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 MAGI3Q5TCQ9 1506 aa-2.47□□□□□ -2.8
NPM1-206ENST00000519955 CRYBG3Q68DQ2 2970 aa-2.47□□□□□ -2.8
NPM1-206ENST00000519955 LTN1O94822 1766 aa-2.47□□□□□ -2.8
NPM1-206ENST00000519955 MYMXA0A1B0GTQ4 84 aa-2.48□□□□□ -2.81
NPM1-206ENST00000519955 SNHG12Q9BXW3 62 aa-2.48□□□□□ -2.81
NPM1-206ENST00000519955 CFAP54Q96N23 3096 aa-2.49□□□□□ -2.81
NPM1-206ENST00000519955 DEFB130BP0DP73 79 aa-2.49□□□□□ -2.81
NPM1-206ENST00000519955 DEFB130AP0DP74 79 aa-2.49□□□□□ -2.81
NPM1-206ENST00000519955 LYNX1G3V0Z9 82 aa-2.5□□□□□ -2.81
NPM1-206ENST00000519955 NDUFB1O75438 58 aa-2.5□□□□□ -2.81
NPM1-206ENST00000519955 ZNF831Q5JPB2 1677 aa-2.52□□□□□ -2.81
NPM1-206ENST00000519955 AKAP12Q02952 1782 aa-2.52□□□□□ -2.81
NPM1-206ENST00000519955 PKIAP61925 76 aa-2.53□□□□□ -2.81
NPM1-206ENST00000519955 TIMM8BQ9Y5J9 83 aaPredicted RBP-2.53□□□□□ -2.81
NPM1-206ENST00000519955 IAPPP10997 89 aa-2.54□□□□□ -2.82
NPM1-206ENST00000519955 DOT1LQ8TEK3 1739 aa-2.54□□□□□ -2.82
NPM1-206ENST00000519955 IGLV5-48A0A075B6I7 105 aa-2.55□□□□□ -2.82
NPM1-206ENST00000519955 S100A8P05109 93 aa-2.55□□□□□ -2.82
NPM1-206ENST00000519955 IFI6P09912 130 aa-2.55□□□□□ -2.82
NPM1-206ENST00000519955 ANKRD36CQ5JPF3 1778 aa-2.55□□□□□ -2.82
NPM1-206ENST00000519955 PLIN4Q96Q06 1357 aa-2.55□□□□□ -2.82
NPM1-206ENST00000519955 TOGARAM1Q9Y4F4 1720 aa-2.56□□□□□ -2.82
NPM1-206ENST00000519955 DEFB4AO15263 64 aa-2.57□□□□□ -2.82
NPM1-206ENST00000519955 MYO15AQ9UKN7 3530 aa-2.58□□□□□ -2.82
NPM1-206ENST00000519955 SNRPFP62306 86 aaKnown RBP-2.58□□□□□ -2.82
NPM1-206ENST00000519955 LCE6AA0A183 80 aa-2.59□□□□□ -2.82
NPM1-206ENST00000519955 CEBPZOSA8MTT3 80 aa-2.59□□□□□ -2.82
NPM1-206ENST00000519955 PYY3Q5JQD4 70 aa-2.59□□□□□ -2.82
NPM1-206ENST00000519955 RABAC1Q9UI14 185 aa-2.59□□□□□ -2.82
NPM1-206ENST00000519955 TMEM131LA2VDJ0 1609 aa-2.6□□□□□ -2.83
NPM1-206ENST00000519955 KRTAP19-6Q3LI70 58 aa-2.6□□□□□ -2.83
NPM1-206ENST00000519955 LINC00643Q86TS7 51 aa-2.6□□□□□ -2.83
NPM1-206ENST00000519955 WDFY3Q8IZQ1 3526 aa-2.6□□□□□ -2.83
NPM1-206ENST00000519955 SPEGQ15772 3267 aa-2.61□□□□□ -2.83
NPM1-206ENST00000519955 NCOA2Q15596 1464 aa-2.61□□□□□ -2.83
NPM1-206ENST00000519955 LINC01546A6NGU7 62 aa-2.62□□□□□ -2.83
NPM1-206ENST00000519955 PARP4Q9UKK3 1724 aaKnown RBP-2.62□□□□□ -2.83
NPM1-206ENST00000519955 URB2Q14146 1524 aaKnown RBP-2.63□□□□□ -2.83
NPM1-206ENST00000519955 LY75O60449 1722 aa-2.64□□□□□ -2.83
NPM1-206ENST00000519955 MAST1Q9Y2H9 1570 aa-2.64□□□□□ -2.83
NPM1-206ENST00000519955 ACYP1P07311 99 aa-2.64□□□□□ -2.83
NPM1-206ENST00000519955 WT1-ASQ06250 92 aa-2.65□□□□□ -2.83
NPM1-206ENST00000519955 DMDP11532 3685 aa-2.65□□□□□ -2.83
NPM1-206ENST00000519955 VPS13CQ709C8 3753 aa-2.65□□□□□ -2.83
NPM1-206ENST00000519955 MT1FP04733 61 aa-2.67□□□□□ -2.84
NPM1-206ENST00000519955 DIP2BQ9P265 1576 aa-2.67□□□□□ -2.84
NPM1-206ENST00000519955 IFI27P40305 119 aaPredicted RBP-2.68□□□□□ -2.84
NPM1-206ENST00000519955 S100A16Q96FQ6 103 aaKnown RBP-2.68□□□□□ -2.84
NPM1-206ENST00000519955 THOC2Q8NI27 1593 aaKnown RBP-2.69□□□□□ -2.84
NPM1-206ENST00000519955 CCNB3Q8WWL7 1395 aa-2.69□□□□□ -2.84
NPM1-206ENST00000519955 ITSN2Q9NZM3 1697 aa-2.69□□□□□ -2.84
NPM1-206ENST00000519955 SMARCA2P51531 1590 aa-2.7□□□□□ -2.84
NPM1-206ENST00000519955 NOP10Q9NPE3 64 aaKnown RBP-2.7□□□□□ -2.84
NPM1-206ENST00000519955 UMAD1C9J7I0 102 aa-2.71□□□□□ -2.84
NPM1-206ENST00000519955 Q9H521 79 aa-2.71□□□□□ -2.84
NPM1-206ENST00000519955 CCDC88BA6NC98 1476 aa-2.71□□□□□ -2.84
NPM1-206ENST00000519955 ARFGEF2Q9Y6D5 1785 aa-2.72□□□□□ -2.85
NPM1-206ENST00000519955 RPS29P62273 56 aaKnown RBP-2.73□□□□□ -2.85
NPM1-206ENST00000519955 ABCC3O15438 1527 aa-2.73□□□□□ -2.85
NPM1-206ENST00000519955 M0QZ58 72 aa-2.74□□□□□ -2.85
NPM1-206ENST00000519955 BVES-AS1Q5T3Y7 98 aa-2.74□□□□□ -2.85
NPM1-206ENST00000519955 KIF1AQ12756 1690 aa-2.75□□□□□ -2.85
NPM1-206ENST00000519955 DDX60LQ5H9U9 1706 aaKnown RBP-2.75□□□□□ -2.85
NPM1-206ENST00000519955 KIAA0586Q9BVV6 1533 aa-2.75□□□□□ -2.85
NPM1-206ENST00000519955 CENPEQ02224 2701 aa-2.76□□□□□ -2.85
NPM1-206ENST00000519955 H3BUA1 57 aa-2.76□□□□□ -2.85
NPM1-206ENST00000519955 PCNTO95613 3336 aa-2.77□□□□□ -2.85
NPM1-206ENST00000519955 RPS27P42677 84 aaKnown RBP-2.77□□□□□ -2.85
NPM1-206ENST00000519955 RPS27LQ71UM5 84 aaKnown RBP-2.77□□□□□ -2.85
NPM1-206ENST00000519955 V9GYS6 101 aa-2.77□□□□□ -2.85
NPM1-206ENST00000519955 ZC3H13Q5T200 1668 aaKnown RBP-2.77□□□□□ -2.85
NPM1-206ENST00000519955 ITSN1Q15811 1721 aa-2.77□□□□□ -2.85
NPM1-206ENST00000519955 FRYLO94915 3013 aa-2.77□□□□□ -2.85
NPM1-206ENST00000519955 CEP350Q5VT06 3117 aa-2.78□□□□□ -2.85
NPM1-206ENST00000519955 PVALEFA0A1B0GWK0 134 aa-2.78□□□□□ -2.85
NPM1-206ENST00000519955 NDUFA4O00483 81 aa-2.78□□□□□ -2.85
NPM1-206ENST00000519955 SPART-AS1P0CW21 52 aa-2.78□□□□□ -2.85
NPM1-206ENST00000519955 PIK3C2BO00750 1634 aa-2.79□□□□□ -2.86
NPM1-206ENST00000519955 KIF14Q15058 1648 aa-2.79□□□□□ -2.86
NPM1-206ENST00000519955 MAP3K4Q9Y6R4 1608 aa-2.79□□□□□ -2.86
NPM1-206ENST00000519955 DEFB131BA0A096LNP1 70 aa-2.8□□□□□ -2.86
NPM1-206ENST00000519955 M0QY20 66 aa-2.8□□□□□ -2.86
NPM1-206ENST00000519955 A0A1B0GUL6 1792 aa-2.81□□□□□ -2.86
NPM1-206ENST00000519955 PLCH1Q4KWH8 1693 aa-2.81□□□□□ -2.86
NPM1-206ENST00000519955 LRRIQ1Q96JM4 1722 aa-2.82□□□□□ -2.86
NPM1-206ENST00000519955 A8MTW9 85 aa-2.82□□□□□ -2.86
NPM1-206ENST00000519955 MRPL33O75394 65 aaKnown RBP-2.82□□□□□ -2.86
NPM1-206ENST00000519955 SZT2Q5T011 3432 aa-2.82□□□□□ -2.86
NPM1-206ENST00000519955 DEFB136Q30KP8 78 aa-2.83□□□□□ -2.86
NPM1-206ENST00000519955 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-2.83□□□□□ -2.86
NPM1-206ENST00000519955 DNMBPQ6XZF7 1577 aa-2.84□□□□□ -2.86
NPM1-206ENST00000519955 HMGA1P17096 107 aaKnown RBP-2.85□□□□□ -2.87
NPM1-206ENST00000519955 PPLO60437 1756 aa-2.86□□□□□ -2.87
NPM1-206ENST00000519955 KANTRA0A1W2PQU2 76 aa-2.86□□□□□ -2.87
NPM1-206ENST00000519955 MINOS1Q5TGZ0 78 aa-2.86□□□□□ -2.87
NPM1-206ENST00000519955 ERVK-7P63135 1459 aa-2.87□□□□□ -2.87
NPM1-206ENST00000519955 NREPQ16612 68 aa-2.87□□□□□ -2.87
NPM1-206ENST00000519955 CD163L1Q9NR16 1453 aa-2.88□□□□□ -2.87
NPM1-206ENST00000519955 ATP5EP2Q5VTU8 51 aa-2.89□□□□□ -2.87
NPM1-206ENST00000519955 MED14O60244 1454 aa-2.9□□□□□ -2.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms