RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 MT1MQ8N339 61 aa-3.64□□□□□ -2.99
RNU6-1088P-201ENST00000516850 CDC42BPGQ6DT37 1551 aa-3.64□□□□□ -2.99
RNU6-1088P-201ENST00000516850 CCNB3Q8WWL7 1395 aa-3.64□□□□□ -2.99
RNU6-1088P-201ENST00000516850 ZC3H13Q5T200 1668 aaKnown RBP-3.65□□□□□ -2.99
RNU6-1088P-201ENST00000516850 MYMXA0A1B0GTQ4 84 aa-3.66□□□□□ -3
RNU6-1088P-201ENST00000516850 MT2AP02795 61 aa-3.67□□□□□ -3
RNU6-1088P-201ENST00000516850 ITPR2Q14571 2701 aa-3.67□□□□□ -3
RNU6-1088P-201ENST00000516850 CCDC88BA6NC98 1476 aa-3.67□□□□□ -3
RNU6-1088P-201ENST00000516850 KIF1AQ12756 1690 aa-3.68□□□□□ -3
RNU6-1088P-201ENST00000516850 URB2Q14146 1524 aaKnown RBP-3.68□□□□□ -3
RNU6-1088P-201ENST00000516850 TMEM131LA2VDJ0 1609 aa-3.68□□□□□ -3
RNU6-1088P-201ENST00000516850 NDUFA4O00483 81 aa-3.69□□□□□ -3
RNU6-1088P-201ENST00000516850 MT1BP07438 61 aa-3.69□□□□□ -3
RNU6-1088P-201ENST00000516850 LINC00587B1AMM8 73 aa-3.7□□□□□ -3
RNU6-1088P-201ENST00000516850 UMAD1C9J7I0 102 aa-3.71□□□□□ -3
RNU6-1088P-201ENST00000516850 DEFB131BA0A096LNP1 70 aa-3.73□□□□□ -3.01
RNU6-1088P-201ENST00000516850 ACBD7Q8N6N7 88 aa-3.73□□□□□ -3.01
RNU6-1088P-201ENST00000516850 DMXL2Q8TDJ6 3036 aa-3.74□□□□□ -3.01
RNU6-1088P-201ENST00000516850 CEBPZOSA8MTT3 80 aa-3.74□□□□□ -3.01
RNU6-1088P-201ENST00000516850 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-3.75□□□□□ -3.01
RNU6-1088P-201ENST00000516850 TJP1Q07157 1748 aa-3.75□□□□□ -3.01
RNU6-1088P-201ENST00000516850 MRPL33O75394 65 aaKnown RBP-3.75□□□□□ -3.01
RNU6-1088P-201ENST00000516850 GYPAP02724 150 aa-3.75□□□□□ -3.01
RNU6-1088P-201ENST00000516850 S100PP25815 95 aa-3.75□□□□□ -3.01
RNU6-1088P-201ENST00000516850 NOP10Q9NPE3 64 aaKnown RBP-3.75□□□□□ -3.01
RNU6-1088P-201ENST00000516850 TLN1Q9Y490 2541 aaKnown RBP-3.76□□□□□ -3.01
RNU6-1088P-201ENST00000516850 BVES-AS1Q5T3Y7 98 aa-3.76□□□□□ -3.01
RNU6-1088P-201ENST00000516850 PIK3C2BO00750 1634 aa-3.77□□□□□ -3.01
RNU6-1088P-201ENST00000516850 RABAC1Q9UI14 185 aa-3.77□□□□□ -3.01
RNU6-1088P-201ENST00000516850 CEP162Q5TB80 1403 aa-3.78□□□□□ -3.01
RNU6-1088P-201ENST00000516850 NRAPQ86VF7 1730 aa-3.78□□□□□ -3.02
RNU6-1088P-201ENST00000516850 ANKRD26Q9UPS8 1709 aa-3.78□□□□□ -3.02
RNU6-1088P-201ENST00000516850 C20orf78Q9BR46 151 aa-3.79□□□□□ -3.02
RNU6-1088P-201ENST00000516850 LRRIQ1Q96JM4 1722 aa-3.79□□□□□ -3.02
RNU6-1088P-201ENST00000516850 CFAP43Q8NDM7 1665 aa-3.8□□□□□ -3.02
RNU6-1088P-201ENST00000516850 CNTLNQ9NXG0 1405 aa-3.8□□□□□ -3.02
RNU6-1088P-201ENST00000516850 MAST1Q9Y2H9 1570 aa-3.8□□□□□ -3.02
RNU6-1088P-201ENST00000516850 RICTORQ6R327 1708 aa-3.81□□□□□ -3.02
RNU6-1088P-201ENST00000516850 RBP2P50120 134 aa-3.81□□□□□ -3.02
RNU6-1088P-201ENST00000516850 CSMD2Q7Z408 3487 aa-3.81□□□□□ -3.02
RNU6-1088P-201ENST00000516850 H3BUA1 57 aa-3.82□□□□□ -3.02
RNU6-1088P-201ENST00000516850 RPS27P42677 84 aaKnown RBP-3.83□□□□□ -3.02
RNU6-1088P-201ENST00000516850 RPS27LQ71UM5 84 aaKnown RBP-3.83□□□□□ -3.02
RNU6-1088P-201ENST00000516850 LINC01546A6NGU7 62 aa-3.84□□□□□ -3.02
RNU6-1088P-201ENST00000516850 PPLO60437 1756 aa-3.84□□□□□ -3.02
RNU6-1088P-201ENST00000516850 SNRPFP62306 86 aaKnown RBP-3.85□□□□□ -3.03
RNU6-1088P-201ENST00000516850 NREPQ16612 68 aa-3.86□□□□□ -3.03
RNU6-1088P-201ENST00000516850 MINOS1Q5TGZ0 78 aa-3.86□□□□□ -3.03
RNU6-1088P-201ENST00000516850 LINC00643Q86TS7 51 aa-3.86□□□□□ -3.03
RNU6-1088P-201ENST00000516850 C14orf144Q96I85 54 aa-3.86□□□□□ -3.03
RNU6-1088P-201ENST00000516850 TCEAL7Q9BRU2 100 aa-3.86□□□□□ -3.03
RNU6-1088P-201ENST00000516850 ATMQ13315 3056 aa-3.86□□□□□ -3.03
RNU6-1088P-201ENST00000516850 RNF17Q9BXT8 1623 aaKnown RBP-3.87□□□□□ -3.03
RNU6-1088P-201ENST00000516850 HMGA1P17096 107 aaKnown RBP-3.88□□□□□ -3.03
RNU6-1088P-201ENST00000516850 HFM1A2PYH4 1435 aa-3.88□□□□□ -3.03
RNU6-1088P-201ENST00000516850 AKAP12Q02952 1782 aa-3.89□□□□□ -3.03
RNU6-1088P-201ENST00000516850 A0A1B0GUL6 1792 aa-3.89□□□□□ -3.03
RNU6-1088P-201ENST00000516850 NCMAPQ5T1S8 102 aa-3.92□□□□□ -3.04
RNU6-1088P-201ENST00000516850 UBL5Q9BZL1 73 aa-3.92□□□□□ -3.04
RNU6-1088P-201ENST00000516850 ARHGAP35Q9NRY4 1499 aa-3.92□□□□□ -3.04
RNU6-1088P-201ENST00000516850 INO80Q9ULG1 1556 aaPredicted RBP-3.93□□□□□ -3.04
RNU6-1088P-201ENST00000516850 CRIP1P50238 77 aa-3.93□□□□□ -3.04
RNU6-1088P-201ENST00000516850 PVALEFA0A1B0GWK0 134 aa-3.95□□□□□ -3.04
RNU6-1088P-201ENST00000516850 KCNQ1DNQ9H478 68 aa-3.95□□□□□ -3.04
RNU6-1088P-201ENST00000516850 SMARCA2P51531 1590 aa-3.95□□□□□ -3.04
RNU6-1088P-201ENST00000516850 MAP3K4Q9Y6R4 1608 aa-3.95□□□□□ -3.04
RNU6-1088P-201ENST00000516850 ATP6V1G2-DDX39BF2Z307 99 aa-3.97□□□□□ -3.04
RNU6-1088P-201ENST00000516850 M0QY20 66 aa-3.97□□□□□ -3.04
RNU6-1088P-201ENST00000516850 M0QZ58 72 aa-3.97□□□□□ -3.04
RNU6-1088P-201ENST00000516850 M0R143 59 aa-3.98□□□□□ -3.05
RNU6-1088P-201ENST00000516850 ATP5EP2Q5VTU8 51 aa-3.99□□□□□ -3.05
RNU6-1088P-201ENST00000516850 C6orf48Q9UBA6 75 aa-3.99□□□□□ -3.05
RNU6-1088P-201ENST00000516850 RALGAPBQ86X10 1494 aa-3.99□□□□□ -3.05
RNU6-1088P-201ENST00000516850 KIF14Q15058 1648 aa-3.99□□□□□ -3.05
RNU6-1088P-201ENST00000516850 DEFB4AO15263 64 aa-4□□□□□ -3.05
RNU6-1088P-201ENST00000516850 FCER1GP30273 86 aa-4□□□□□ -3.05
RNU6-1088P-201ENST00000516850 BOD1L1Q8NFC6 3051 aa-4□□□□□ -3.05
RNU6-1088P-201ENST00000516850 SFTA3P0C7M3 94 aa-4.01□□□□□ -3.05
RNU6-1088P-201ENST00000516850 PYY3Q5JQD4 70 aa-4.02□□□□□ -3.05
RNU6-1088P-201ENST00000516850 NHSQ6T4R5 1651 aa-4.03□□□□□ -3.05
RNU6-1088P-201ENST00000516850 MYO5CQ9NQX4 1742 aa-4.03□□□□□ -3.05
RNU6-1088P-201ENST00000516850 S100A16Q96FQ6 103 aaKnown RBP-4.03□□□□□ -3.05
RNU6-1088P-201ENST00000516850 A0A087WXM4 84 aa-4.04□□□□□ -3.06
RNU6-1088P-201ENST00000516850 NCBP2-AS2Q69YL0 99 aa-4.04□□□□□ -3.06
RNU6-1088P-201ENST00000516850 SPART-AS1P0CW21 52 aa-4.05□□□□□ -3.06
RNU6-1088P-201ENST00000516850 ERVK-7P63135 1459 aa-4.05□□□□□ -3.06
RNU6-1088P-201ENST00000516850 FREM2Q5SZK8 3169 aa-4.06□□□□□ -3.06
RNU6-1088P-201ENST00000516850 CD163L1Q9NR16 1453 aa-4.08□□□□□ -3.06
RNU6-1088P-201ENST00000516850 KDM5DQ9BY66 1539 aa-4.09□□□□□ -3.06
RNU6-1088P-201ENST00000516850 KANTRA0A1W2PQU2 76 aa-4.1□□□□□ -3.07
RNU6-1088P-201ENST00000516850 A8MTW9 85 aa-4.1□□□□□ -3.07
RNU6-1088P-201ENST00000516850 SNHG12Q9BXW3 62 aa-4.1□□□□□ -3.07
RNU6-1088P-201ENST00000516850 ABCC3O15438 1527 aa-4.11□□□□□ -3.07
RNU6-1088P-201ENST00000516850 ETDCA0A1B0GVM5 59 aa-4.12□□□□□ -3.07
RNU6-1088P-201ENST00000516850 SMIM13P0DJ93 91 aa-4.14□□□□□ -3.07
RNU6-1088P-201ENST00000516850 KRTAP19-6Q3LI70 58 aa-4.15□□□□□ -3.07
RNU6-1088P-201ENST00000516850 EIF2AK4Q9P2K8 1649 aaKnown RBP-4.16□□□□□ -3.08
RNU6-1088P-201ENST00000516850 TTC37Q6PGP7 1564 aa-4.18□□□□□ -3.08
RNU6-1088P-201ENST00000516850 PRUNE2Q8WUY3 3088 aa-4.18□□□□□ -3.08
RNU6-1088P-201ENST00000516850 ZFHX4Q86UP3 3567 aa-4.19□□□□□ -3.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms