RNA–Protein interactions for RNA: ENST00000512380.1

PDLIM3-208, Transcript of PDZ and LIM domain 3, humanhuman

TSL 2

Gene PDLIM3, Length 764 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-208ENST00000512380 A6NN06 94 aa3.34□□□□□ -1.87
PDLIM3-208ENST00000512380 COX17Q14061 63 aa3.34□□□□□ -1.87
PDLIM3-208ENST00000512380 LINC01545Q5VT33 79 aa3.34□□□□□ -1.87
PDLIM3-208ENST00000512380 SFTA2Q6UW10 78 aa3.34□□□□□ -1.87
PDLIM3-208ENST00000512380 Q6ZSA8 131 aa3.34□□□□□ -1.87
PDLIM3-208ENST00000512380 NDUFA12Q9UI09 145 aa3.34□□□□□ -1.87
PDLIM3-208ENST00000512380 RYR3Q15413 4870 aa3.34□□□□□ -1.87
PDLIM3-208ENST00000512380 RYR2Q92736 4967 aa3.34□□□□□ -1.87
PDLIM3-208ENST00000512380 FP248Q71RG6 208 aaPredicted RBP3.33□□□□□ -1.88
PDLIM3-208ENST00000512380 PLAC8Q9NZF1 115 aa3.33□□□□□ -1.88
PDLIM3-208ENST00000512380 DNAH6Q9C0G6 4158 aa3.33□□□□□ -1.88
PDLIM3-208ENST00000512380 DNAH2Q9P225 4427 aa3.33□□□□□ -1.88
PDLIM3-208ENST00000512380 DNAH10Q8IVF4 4471 aa3.32□□□□□ -1.88
PDLIM3-208ENST00000512380 DNAH17Q9UFH2 4485 aa3.32□□□□□ -1.88
PDLIM3-208ENST00000512380 SMIM13P0DJ93 91 aa3.32□□□□□ -1.88
PDLIM3-208ENST00000512380 MIR22HGQ0VDD5 57 aa3.32□□□□□ -1.88
PDLIM3-208ENST00000512380 RPL37AP61513 92 aaKnown RBP3.31□□□□□ -1.88
PDLIM3-208ENST00000512380 C22orf24Q9Y442 160 aa3.31□□□□□ -1.88
PDLIM3-208ENST00000512380 ZNF815PA8K554 130 aa3.3□□□□□ -1.88
PDLIM3-208ENST00000512380 Q5VSD8 79 aa3.3□□□□□ -1.88
PDLIM3-208ENST00000512380 IGKV4-1P06312 121 aa3.29□□□□□ -1.88
PDLIM3-208ENST00000512380 C14orf144Q96I85 54 aa3.29□□□□□ -1.88
PDLIM3-208ENST00000512380 PKD1P98161 4303 aa3.29□□□□□ -1.88
PDLIM3-208ENST00000512380 FAT2Q9NYQ8 4349 aa3.28□□□□□ -1.88
PDLIM3-208ENST00000512380 CCDC179H3BU77 68 aa3.28□□□□□ -1.88
PDLIM3-208ENST00000512380 ATP11AUNQ6ZP68 121 aa3.28□□□□□ -1.88
PDLIM3-208ENST00000512380 COA5Q86WW8 74 aa3.28□□□□□ -1.88
PDLIM3-208ENST00000512380 NPC2P61916 151 aa3.27□□□□□ -1.89
PDLIM3-208ENST00000512380 FRAS1Q86XX4 4008 aa3.26□□□□□ -1.89
PDLIM3-208ENST00000512380 F8W1H4 67 aa3.26□□□□□ -1.89
PDLIM3-208ENST00000512380 S100A7L2Q5SY68 101 aa3.26□□□□□ -1.89
PDLIM3-208ENST00000512380 KRTAP5-5Q701N2 237 aaPredicted RBP3.26□□□□□ -1.89
PDLIM3-208ENST00000512380 COPS9Q8WXC6 57 aa3.26□□□□□ -1.89
PDLIM3-208ENST00000512380 VAMP8Q9BV40 100 aa3.26□□□□□ -1.89
PDLIM3-208ENST00000512380 NCR3O14931 201 aa3.25□□□□□ -1.89
PDLIM3-208ENST00000512380 SPATA45Q537H7 98 aa3.25□□□□□ -1.89
PDLIM3-208ENST00000512380 SPINK6Q6UWN8 80 aa3.25□□□□□ -1.89
PDLIM3-208ENST00000512380 MUSTN1Q8IVN3 82 aa3.25□□□□□ -1.89
PDLIM3-208ENST00000512380 LINC00308Q8TCZ7 52 aa3.25□□□□□ -1.89
PDLIM3-208ENST00000512380 ORMDL1Q9P0S3 153 aa3.25□□□□□ -1.89
PDLIM3-208ENST00000512380 DNAH11Q96DT5 4516 aa3.24□□□□□ -1.89
PDLIM3-208ENST00000512380 SMIM6P0DI80 62 aa3.24□□□□□ -1.89
PDLIM3-208ENST00000512380 COX8AP10176 69 aa3.24□□□□□ -1.89
PDLIM3-208ENST00000512380 IFITM1P13164 125 aa3.24□□□□□ -1.89
PDLIM3-208ENST00000512380 KRTAP5-2Q701N4 177 aa3.24□□□□□ -1.89
PDLIM3-208ENST00000512380 EPPK1P58107 5090 aaKnown RBP3.24□□□□□ -1.89
PDLIM3-208ENST00000512380 BCE1O60756 84 aa3.23□□□□□ -1.89
PDLIM3-208ENST00000512380 SPANXDQ9BXN6 97 aa3.23□□□□□ -1.89
PDLIM3-208ENST00000512380 TRBV10-3A0A0K0K1G6 114 aa3.22□□□□□ -1.89
PDLIM3-208ENST00000512380 KRTAP10-4P60372 401 aaPredicted RBP3.22□□□□□ -1.89
PDLIM3-208ENST00000512380 PYY3Q5JQD4 70 aa3.22□□□□□ -1.89
PDLIM3-208ENST00000512380 ETDCA0A1B0GVM5 59 aa3.21□□□□□ -1.9
PDLIM3-208ENST00000512380 COX7CP15954 63 aa3.21□□□□□ -1.9
PDLIM3-208ENST00000512380 KCNQ1DNQ9H478 68 aa3.21□□□□□ -1.9
PDLIM3-208ENST00000512380 DYNC1H1Q14204 4646 aaKnown RBP3.21□□□□□ -1.9
PDLIM3-208ENST00000512380 TRAV13-2A0A0B4J235 113 aa3.2□□□□□ -1.9
PDLIM3-208ENST00000512380 CDC42SE1Q9NRR8 79 aa3.2□□□□□ -1.9
PDLIM3-208ENST00000512380 HIGD1BQ9P298 99 aa3.2□□□□□ -1.9
PDLIM3-208ENST00000512380 LRP1BQ9NZR2 4599 aa3.2□□□□□ -1.9
PDLIM3-208ENST00000512380 HECTD4Q9Y4D8 3996 aa3.2□□□□□ -1.9
PDLIM3-208ENST00000512380 TRAV23DV6A0A075B6W5 121 aa3.19□□□□□ -1.9
PDLIM3-208ENST00000512380 PRLHP81277 87 aa3.19□□□□□ -1.9
PDLIM3-208ENST00000512380 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.19□□□□□ -1.9
PDLIM3-208ENST00000512380 UQCR10Q9UDW1 63 aa3.19□□□□□ -1.9
PDLIM3-208ENST00000512380 DNAH5Q8TE73 4624 aa3.18□□□□□ -1.9
PDLIM3-208ENST00000512380 BIRC6Q9NR09 4857 aa3.18□□□□□ -1.9
PDLIM3-208ENST00000512380 LINC01600Q96MT4 127 aa3.18□□□□□ -1.9
PDLIM3-208ENST00000512380 PRO1933Q9H354 126 aa3.18□□□□□ -1.9
PDLIM3-208ENST00000512380 PKHD1P08F94 4074 aa3.18□□□□□ -1.9
PDLIM3-208ENST00000512380 COX7BP24311 80 aa3.17□□□□□ -1.9
PDLIM3-208ENST00000512380 SPRR1AP35321 89 aa3.17□□□□□ -1.9
PDLIM3-208ENST00000512380 SMIM11BQ8TCY0 68 aa3.17□□□□□ -1.9
PDLIM3-208ENST00000512380 SERP1Q9Y6X1 66 aa3.17□□□□□ -1.9
PDLIM3-208ENST00000512380 DNAH8Q96JB1 4490 aa3.17□□□□□ -1.9
PDLIM3-208ENST00000512380 SNCGO76070 127 aa3.16□□□□□ -1.9
PDLIM3-208ENST00000512380 KRTAP13-1Q8IUC0 172 aa3.16□□□□□ -1.9
PDLIM3-208ENST00000512380 DEFB105AQ8NG35 78 aa3.16□□□□□ -1.9
PDLIM3-208ENST00000512380 KIAA1109Q2LD37 5005 aa3.15□□□□□ -1.9
PDLIM3-208ENST00000512380 HSD52Q0P140 79 aa3.15□□□□□ -1.91
PDLIM3-208ENST00000512380 Q6ZRX8 168 aa3.15□□□□□ -1.91
PDLIM3-208ENST00000512380 PRO1854Q9UHT4 67 aa3.15□□□□□ -1.91
PDLIM3-208ENST00000512380 APOBP04114 4563 aaKnown RBP3.15□□□□□ -1.91
PDLIM3-208ENST00000512380 HSPG2P98160 4391 aa3.14□□□□□ -1.91
PDLIM3-208ENST00000512380 GTF2H5Q6ZYL4 71 aa3.14□□□□□ -1.91
PDLIM3-208ENST00000512380 SPRR4Q96PI1 79 aa3.14□□□□□ -1.91
PDLIM3-208ENST00000512380 hADV29S1A0JD25 119 aa3.13□□□□□ -1.91
PDLIM3-208ENST00000512380 H0YGX0 51 aa3.13□□□□□ -1.91
PDLIM3-208ENST00000512380 ELOF1P60002 83 aaKnown RBP3.13□□□□□ -1.91
PDLIM3-208ENST00000512380 BVES-AS1Q5T3Y7 98 aa3.13□□□□□ -1.91
PDLIM3-208ENST00000512380 M0R143 59 aa3.12□□□□□ -1.91
PDLIM3-208ENST00000512380 COX6CP09669 75 aa3.12□□□□□ -1.91
PDLIM3-208ENST00000512380 CSAG1Q6PB30 78 aa3.12□□□□□ -1.91
PDLIM3-208ENST00000512380 LINC00575Q6W349 94 aa3.12□□□□□ -1.91
PDLIM3-208ENST00000512380 LIMD2Q9BT23 127 aa3.12□□□□□ -1.91
PDLIM3-208ENST00000512380 SRRM2Q9UQ35 2752 aaKnown RBP3.12□□□□□ -1.91
PDLIM3-208ENST00000512380 RYR1P21817 5038 aa3.11□□□□□ -1.91
PDLIM3-208ENST00000512380 FAT1Q14517 4588 aa3.11□□□□□ -1.91
PDLIM3-208ENST00000512380 TEX49A0A1B0GTD5 131 aa3.11□□□□□ -1.91
PDLIM3-208ENST00000512380 DNAL4O96015 105 aa3.11□□□□□ -1.91
PDLIM3-208ENST00000512380 MT1HL1P0DM35 61 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms