RNA–Protein interactions for RNA: ENST00000511600.5

RNF4-214, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF4, Length 4,123 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-214ENST00000511600 SVEP1Q4LDE5 3571 aa4.25□□□□□ -1.73
RNF4-214ENST00000511600 NDUFAF8A1L188 74 aa4.24□□□□□ -1.73
RNF4-214ENST00000511600 DNAH10OSP0CZ25 163 aa4.24□□□□□ -1.73
RNF4-214ENST00000511600 K7EIL1 84 aa4.23□□□□□ -1.73
RNF4-214ENST00000511600 ZNF861PO60384 105 aa4.23□□□□□ -1.73
RNF4-214ENST00000511600 LY6G6CO95867 125 aa4.22□□□□□ -1.73
RNF4-214ENST00000511600 KRTAP10-11P60412 298 aa4.21□□□□□ -1.74
RNF4-214ENST00000511600 NOTCH2NLQ7Z3S9 236 aa4.21□□□□□ -1.74
RNF4-214ENST00000511600 CIRBP-AS1Q8TBR5 109 aa4.21□□□□□ -1.74
RNF4-214ENST00000511600 A0A1B0GU33 70 aa4.21□□□□□ -1.74
RNF4-214ENST00000511600 LCE2BO14633 110 aa4.21□□□□□ -1.74
RNF4-214ENST00000511600 TGP01266 2768 aa4.2□□□□□ -1.74
RNF4-214ENST00000511600 FBN1P35555 2871 aaKnown RBP4.2□□□□□ -1.74
RNF4-214ENST00000511600 LINC00483Q53H64 154 aa4.19□□□□□ -1.74
RNF4-214ENST00000511600 ANK3Q12955 4377 aaKnown RBP4.19□□□□□ -1.74
RNF4-214ENST00000511600 VPS13CQ709C8 3753 aa4.19□□□□□ -1.74
RNF4-214ENST00000511600 A8MUU9 505 aa4.18□□□□□ -1.74
RNF4-214ENST00000511600 C20orf166-AS1Q96NR2 134 aa4.18□□□□□ -1.74
RNF4-214ENST00000511600 PKD1L1Q8TDX9 2849 aa4.17□□□□□ -1.74
RNF4-214ENST00000511600 SEC61BP60468 96 aaKnown RBP4.16□□□□□ -1.74
RNF4-214ENST00000511600 KRTAP4-16G5E9R7 235 aaPredicted RBP4.16□□□□□ -1.74
RNF4-214ENST00000511600 STAB2Q8WWQ8 2551 aa4.16□□□□□ -1.74
RNF4-214ENST00000511600 TENM1Q9UKZ4 2725 aa4.15□□□□□ -1.74
RNF4-214ENST00000511600 IGLV5-52A0A0A0MRZ9 124 aa4.15□□□□□ -1.74
RNF4-214ENST00000511600 SPRR1BP22528 89 aa4.15□□□□□ -1.74
RNF4-214ENST00000511600 KRTAP26-1Q6PEX3 210 aa4.15□□□□□ -1.75
RNF4-214ENST00000511600 CASC10Q5T4H9 136 aa4.14□□□□□ -1.75
RNF4-214ENST00000511600 CUBNO60494 3623 aa4.13□□□□□ -1.75
RNF4-214ENST00000511600 AKAP9Q99996 3911 aa4.13□□□□□ -1.75
RNF4-214ENST00000511600 Q5W150 140 aa4.13□□□□□ -1.75
RNF4-214ENST00000511600 DNHD1Q96M86 4753 aa4.11□□□□□ -1.75
RNF4-214ENST00000511600 VWFP04275 2813 aa4.1□□□□□ -1.75
RNF4-214ENST00000511600 APLNQ9ULZ1 77 aa4.1□□□□□ -1.75
RNF4-214ENST00000511600 LINC00304Q8N9R0 145 aa4.09□□□□□ -1.75
RNF4-214ENST00000511600 LCE2CQ5TA81 110 aa4.09□□□□□ -1.75
RNF4-214ENST00000511600 Q8N1X5 172 aa4.09□□□□□ -1.75
RNF4-214ENST00000511600 ZNF469Q96JG9 3925 aaPredicted RBP4.09□□□□□ -1.76
RNF4-214ENST00000511600 PSORS1C2Q9UIG4 136 aa4.08□□□□□ -1.76
RNF4-214ENST00000511600 KRTAP11-1Q8IUC1 163 aa4.08□□□□□ -1.76
RNF4-214ENST00000511600 PANO1I0J062 215 aa4.07□□□□□ -1.76
RNF4-214ENST00000511600 H1FX-AS1Q4G0G2 97 aa4.07□□□□□ -1.76
RNF4-214ENST00000511600 TENM3Q9P273 2699 aa4.06□□□□□ -1.76
RNF4-214ENST00000511600 RPL37P61927 97 aaKnown RBP4.05□□□□□ -1.76
RNF4-214ENST00000511600 A0A0D9SG42 100 aa4.05□□□□□ -1.76
RNF4-214ENST00000511600 Q96NJ1 140 aa4.03□□□□□ -1.76
RNF4-214ENST00000511600 SPACA4Q8TDM5 124 aa4.02□□□□□ -1.77
RNF4-214ENST00000511600 P0C880 135 aa4□□□□□ -1.77
RNF4-214ENST00000511600 TENM2Q9NT68 2774 aa3.99□□□□□ -1.77
RNF4-214ENST00000511600 CAMK2N1Q7Z7J9 78 aa3.99□□□□□ -1.77
RNF4-214ENST00000511600 MEGF8Q7Z7M0 2845 aa3.98□□□□□ -1.77
RNF4-214ENST00000511600 NBDYA0A0U1RRE5 68 aa3.97□□□□□ -1.77
RNF4-214ENST00000511600 ANAPC11Q9NYG5 84 aa3.97□□□□□ -1.77
RNF4-214ENST00000511600 Q6ZSA8 131 aa3.96□□□□□ -1.78
RNF4-214ENST00000511600 DMBT1Q9UGM3 2413 aaPredicted RBP3.96□□□□□ -1.78
RNF4-214ENST00000511600 LCE2AQ5TA79 106 aaPredicted RBP3.96□□□□□ -1.78
RNF4-214ENST00000511600 COX6B2Q6YFQ2 88 aa3.95□□□□□ -1.78
RNF4-214ENST00000511600 H0YAA0 97 aa3.95□□□□□ -1.78
RNF4-214ENST00000511600 A0A087WTM6 91 aa3.94□□□□□ -1.78
RNF4-214ENST00000511600 KRTAP7-1Q8IUC3 87 aa3.93□□□□□ -1.78
RNF4-214ENST00000511600 TRRAPQ9Y4A5 3859 aa3.93□□□□□ -1.78
RNF4-214ENST00000511600 KRTAP1-5Q9BYS1 174 aa3.89□□□□□ -1.79
RNF4-214ENST00000511600 DNAH3Q8TD57 4116 aa3.88□□□□□ -1.79
RNF4-214ENST00000511600 TYMSOSQ8TAI1 123 aa3.87□□□□□ -1.79
RNF4-214ENST00000511600 C10orf95Q9H7T3 257 aa3.85□□□□□ -1.79
RNF4-214ENST00000511600 CMYA5Q8N3K9 4069 aa3.84□□□□□ -1.79
RNF4-214ENST00000511600 Q6ZRN7 208 aaPredicted RBP3.84□□□□□ -1.79
RNF4-214ENST00000511600 KRTAP13-3Q3SY46 172 aa3.84□□□□□ -1.79
RNF4-214ENST00000511600 LORP23490 312 aaPredicted RBP3.83□□□□□ -1.8
RNF4-214ENST00000511600 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.82□□□□□ -1.8
RNF4-214ENST00000511600 ANK2Q01484 3957 aa3.82□□□□□ -1.8
RNF4-214ENST00000511600 HUWE1Q7Z6Z7 4374 aaKnown RBP3.82□□□□□ -1.8
RNF4-214ENST00000511600 PLAC4Q8WY50 150 aa3.81□□□□□ -1.8
RNF4-214ENST00000511600 KRTAP13-1Q8IUC0 172 aa3.8□□□□□ -1.8
RNF4-214ENST00000511600 KRTAP15-1Q3LI76 137 aa3.8□□□□□ -1.8
RNF4-214ENST00000511600 COL7A1Q02388 2944 aa3.8□□□□□ -1.8
RNF4-214ENST00000511600 SMR3BP02814 79 aaPredicted RBP3.79□□□□□ -1.8
RNF4-214ENST00000511600 C9orf92A6NGG3 77 aa3.78□□□□□ -1.8
RNF4-214ENST00000511600 TPRXLQ17RH7 258 aa3.78□□□□□ -1.8
RNF4-214ENST00000511600 S4R3F8 94 aa3.76□□□□□ -1.81
RNF4-214ENST00000511600 DNAH1Q9P2D7 4330 aa3.76□□□□□ -1.81
RNF4-214ENST00000511600 DYNC2H1Q8NCM8 4307 aaKnown RBP3.75□□□□□ -1.81
RNF4-214ENST00000511600 DNAH9Q9NYC9 4486 aa3.75□□□□□ -1.81
RNF4-214ENST00000511600 KRTAP10-2P60368 255 aa3.74□□□□□ -1.81
RNF4-214ENST00000511600 PRKDCP78527 4128 aaKnown RBP3.74□□□□□ -1.81
RNF4-214ENST00000511600 Q5VSD8 79 aa3.71□□□□□ -1.82
RNF4-214ENST00000511600 KRTAP10-1P60331 282 aa3.7□□□□□ -1.82
RNF4-214ENST00000511600 BIRC6Q9NR09 4857 aa3.68□□□□□ -1.82
RNF4-214ENST00000511600 KRTAP17-1Q9BYP8 105 aa3.67□□□□□ -1.82
RNF4-214ENST00000511600 A0A1B0GVY2 172 aa3.66□□□□□ -1.82
RNF4-214ENST00000511600 VPS13DQ5THJ4 4388 aa3.66□□□□□ -1.82
RNF4-214ENST00000511600 M0QZ58 72 aa3.65□□□□□ -1.82
RNF4-214ENST00000511600 PLECQ15149 4684 aaKnown RBP3.63□□□□□ -1.83
RNF4-214ENST00000511600 PP632Q6XCG6 107 aa3.62□□□□□ -1.83
RNF4-214ENST00000511600 DNAH6Q9C0G6 4158 aa3.62□□□□□ -1.83
RNF4-214ENST00000511600 R4GN34 69 aa3.62□□□□□ -1.83
RNF4-214ENST00000511600 SRRM2Q9UQ35 2752 aaKnown RBP3.6□□□□□ -1.83
RNF4-214ENST00000511600 DNAH7Q8WXX0 4024 aa3.6□□□□□ -1.83
RNF4-214ENST00000511600 ALMS1Q8TCU4 4167 aa3.6□□□□□ -1.83
RNF4-214ENST00000511600 DNAH10Q8IVF4 4471 aa3.6□□□□□ -1.83
RNF4-214ENST00000511600 DNAH17Q9UFH2 4485 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms