RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 ABCA5Q8WWZ7 1642 aa-0.72□□□□□ -2.52
GYPB-209ENST00000508618 URB2Q14146 1524 aaKnown RBP-0.73□□□□□ -2.53
GYPB-209ENST00000508618 LMTK2Q8IWU2 1503 aa-0.73□□□□□ -2.53
GYPB-209ENST00000508618 SAMD9Q5K651 1589 aa-0.73□□□□□ -2.53
GYPB-209ENST00000508618 MROH1Q8NDA8 1641 aa-0.73□□□□□ -2.53
GYPB-209ENST00000508618 IGLV5-48A0A075B6I7 105 aa-0.73□□□□□ -2.53
GYPB-209ENST00000508618 A0A096LPF7 62 aa-0.73□□□□□ -2.53
GYPB-209ENST00000508618 APOC2P02655 101 aa-0.73□□□□□ -2.53
GYPB-209ENST00000508618 DEFB130BP0DP73 79 aa-0.73□□□□□ -2.53
GYPB-209ENST00000508618 DEFB130AP0DP74 79 aa-0.73□□□□□ -2.53
GYPB-209ENST00000508618 SNCAP37840 140 aa-0.73□□□□□ -2.53
GYPB-209ENST00000508618 GNG11P61952 73 aa-0.73□□□□□ -2.53
GYPB-209ENST00000508618 TDRG1Q3Y452 100 aa-0.73□□□□□ -2.53
GYPB-209ENST00000508618 LINC00470Q9BZP3 86 aa-0.73□□□□□ -2.53
GYPB-209ENST00000508618 FAM208AQ9UK61 1670 aaKnown RBP-0.73□□□□□ -2.53
GYPB-209ENST00000508618 KTN1Q86UP2 1357 aaKnown RBP-0.73□□□□□ -2.53
GYPB-209ENST00000508618 CLIP1P30622 1438 aa-0.73□□□□□ -2.53
GYPB-209ENST00000508618 A2ML1A8K2U0 1454 aa-0.73□□□□□ -2.53
GYPB-209ENST00000508618 FANCAO15360 1455 aa-0.73□□□□□ -2.53
GYPB-209ENST00000508618 CPS1P31327 1500 aa-0.74□□□□□ -2.53
GYPB-209ENST00000508618 CLTCL1P53675 1640 aa-0.74□□□□□ -2.53
GYPB-209ENST00000508618 TRAV30A0A087WSZ9 112 aa-0.74□□□□□ -2.53
GYPB-209ENST00000508618 MMP24-AS1A0A0U1RRL7 71 aa-0.74□□□□□ -2.53
GYPB-209ENST00000508618 DEFB108AA8MXU0 73 aa-0.74□□□□□ -2.53
GYPB-209ENST00000508618 OOSP1A8MZH6 123 aa-0.74□□□□□ -2.53
GYPB-209ENST00000508618 TRAPPC2P0DI81 140 aa-0.74□□□□□ -2.53
GYPB-209ENST00000508618 TRAPPC2BP0DI82 140 aa-0.74□□□□□ -2.53
GYPB-209ENST00000508618 FGF7P21781 194 aa-0.74□□□□□ -2.53
GYPB-209ENST00000508618 BTG2P78543 158 aa-0.74□□□□□ -2.53
GYPB-209ENST00000508618 C9orf153Q5TBE3 101 aa-0.74□□□□□ -2.53
GYPB-209ENST00000508618 C8orf59Q8N0T1 100 aaPredicted RBP-0.74□□□□□ -2.53
GYPB-209ENST00000508618 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.74□□□□□ -2.53
GYPB-209ENST00000508618 NAIPQ13075 1403 aa-0.74□□□□□ -2.53
GYPB-209ENST00000508618 UBE2L5PA0A1B0GUS4 154 aa-0.75□□□□□ -2.53
GYPB-209ENST00000508618 RPS27P42677 84 aaKnown RBP-0.75□□□□□ -2.53
GYPB-209ENST00000508618 UBE2L3P68036 154 aaKnown RBP-0.75□□□□□ -2.53
GYPB-209ENST00000508618 WFDC10BQ8IUB3 73 aa-0.75□□□□□ -2.53
GYPB-209ENST00000508618 C12orf57Q99622 126 aa-0.75□□□□□ -2.53
GYPB-209ENST00000508618 MRPL34Q9BQ48 92 aaKnown RBP-0.75□□□□□ -2.53
GYPB-209ENST00000508618 PZPP20742 1482 aa-0.75□□□□□ -2.53
GYPB-209ENST00000508618 ABCC10Q5T3U5 1492 aa-0.75□□□□□ -2.53
GYPB-209ENST00000508618 MROH2BQ7Z745 1585 aa-0.75□□□□□ -2.53
GYPB-209ENST00000508618 CRYM-AS1A6NIL9 109 aa-0.76□□□□□ -2.53
GYPB-209ENST00000508618 F6UZH7 168 aa-0.76□□□□□ -2.53
GYPB-209ENST00000508618 COX6CP09669 75 aa-0.76□□□□□ -2.53
GYPB-209ENST00000508618 SAA2P0DJI9 122 aaPredicted RBP-0.76□□□□□ -2.53
GYPB-209ENST00000508618 HSD52Q0P140 79 aa-0.76□□□□□ -2.53
GYPB-209ENST00000508618 DEFB107AQ8IZN7 70 aa-0.76□□□□□ -2.53
GYPB-209ENST00000508618 DEFB108BQ8NET1 73 aa-0.76□□□□□ -2.53
GYPB-209ENST00000508618 PRO1854Q9UHT4 67 aa-0.76□□□□□ -2.53
GYPB-209ENST00000508618 ABCC1P33527 1531 aa-0.76□□□□□ -2.53
GYPB-209ENST00000508618 ARHGAP5Q13017 1502 aa-0.76□□□□□ -2.53
GYPB-209ENST00000508618 ABCA9Q8IUA7 1624 aa-0.76□□□□□ -2.53
GYPB-209ENST00000508618 CLTCQ00610 1675 aaKnown RBP-0.76□□□□□ -2.53
GYPB-209ENST00000508618 PPLO60437 1756 aa-0.76□□□□□ -2.53
GYPB-209ENST00000508618 AKAP12Q02952 1782 aa-0.77□□□□□ -2.53
GYPB-209ENST00000508618 LOC105371267A0A1B0GV96 52 aa-0.77□□□□□ -2.53
GYPB-209ENST00000508618 H3BUX3 64 aa-0.77□□□□□ -2.53
GYPB-209ENST00000508618 K7EP13 123 aa-0.77□□□□□ -2.53
GYPB-209ENST00000508618 ATP5EP56381 51 aaPredicted RBP-0.77□□□□□ -2.53
GYPB-209ENST00000508618 ABCA10Q8WWZ4 1543 aa-0.78□□□□□ -2.53
GYPB-209ENST00000508618 NAP1L6A6NFF2 107 aa-0.78□□□□□ -2.53
GYPB-209ENST00000508618 H3BQF6 201 aa-0.78□□□□□ -2.53
GYPB-209ENST00000508618 H7BZZ5 65 aa-0.78□□□□□ -2.53
GYPB-209ENST00000508618 SNAPC5O75971 98 aa-0.78□□□□□ -2.53
GYPB-209ENST00000508618 GNGT1P63211 74 aa-0.78□□□□□ -2.53
GYPB-209ENST00000508618 FAM107BQ9H098 131 aa-0.78□□□□□ -2.53
GYPB-209ENST00000508618 PAIP2BQ9ULR5 123 aaKnown RBP-0.78□□□□□ -2.53
GYPB-209ENST00000508618 TTC37Q6PGP7 1564 aa-0.79□□□□□ -2.54
GYPB-209ENST00000508618 CFAP74Q9C0B2 1584 aa-0.79□□□□□ -2.54
GYPB-209ENST00000508618 CCDC18Q5T9S5 1454 aa-0.79□□□□□ -2.54
GYPB-209ENST00000508618 SPTY2D1-AS1A0A0U1RR47 76 aa-0.79□□□□□ -2.54
GYPB-209ENST00000508618 FAM24AA6NFZ4 105 aa-0.79□□□□□ -2.54
GYPB-209ENST00000508618 H0Y9P7 68 aa-0.79□□□□□ -2.54
GYPB-209ENST00000508618 SFTA3P0C7M3 94 aa-0.79□□□□□ -2.54
GYPB-209ENST00000508618 AKAIN1P0CW23 69 aa-0.79□□□□□ -2.54
GYPB-209ENST00000508618 SELENOWP63302 87 aa-0.79□□□□□ -2.54
GYPB-209ENST00000508618 RHPN1-AS1Q9BWJ2 59 aa-0.79□□□□□ -2.54
GYPB-209ENST00000508618 CDKN2A-AS1Q9UH64 79 aa-0.79□□□□□ -2.54
GYPB-209ENST00000508618 A0A0G2JND7 137 aa-0.8□□□□□ -2.54
GYPB-209ENST00000508618 NDUFC1O43677 76 aa-0.8□□□□□ -2.54
GYPB-209ENST00000508618 UQCRHP07919 91 aa-0.8□□□□□ -2.54
GYPB-209ENST00000508618 CCDC58Q4VC31 144 aa-0.8□□□□□ -2.54
GYPB-209ENST00000508618 DEFB106AQ8N104 65 aa-0.8□□□□□ -2.54
GYPB-209ENST00000508618 TSC22D3Q99576 134 aa-0.8□□□□□ -2.54
GYPB-209ENST00000508618 TOP2AP11388 1531 aaKnown RBP-0.8□□□□□ -2.54
GYPB-209ENST00000508618 ARFGEF2Q9Y6D5 1785 aa-0.8□□□□□ -2.54
GYPB-209ENST00000508618 TRBV7-7A0A0K0K1E9 115 aa-0.81□□□□□ -2.54
GYPB-209ENST00000508618 C7orf77A4D0Y5 90 aa-0.81□□□□□ -2.54
GYPB-209ENST00000508618 NDUFA2O43678 99 aa-0.81□□□□□ -2.54
GYPB-209ENST00000508618 DEFB114Q30KQ6 69 aa-0.81□□□□□ -2.54
GYPB-209ENST00000508618 PSMG4Q5JS54 123 aa-0.81□□□□□ -2.54
GYPB-209ENST00000508618 NCMAPQ5T1S8 102 aa-0.81□□□□□ -2.54
GYPB-209ENST00000508618 VAMP8Q9BV40 100 aa-0.81□□□□□ -2.54
GYPB-209ENST00000508618 HIGD1BQ9P298 99 aa-0.81□□□□□ -2.54
GYPB-209ENST00000508618 RABAC1Q9UI14 185 aa-0.81□□□□□ -2.54
GYPB-209ENST00000508618 EFCAB5A4FU69 1503 aa-0.81□□□□□ -2.54
GYPB-209ENST00000508618 CCDC88BA6NC98 1476 aa-0.81□□□□□ -2.54
GYPB-209ENST00000508618 HFM1A2PYH4 1435 aa-0.81□□□□□ -2.54
GYPB-209ENST00000508618 SYCP2Q9BX26 1530 aa-0.82□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms