RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 C14orf132Q9NPU4 83 aa4.92□□□□□ -1.62
NEDD9-211ENST00000508546 NDUFV3P56181 108 aaKnown RBP4.91□□□□□ -1.62
NEDD9-211ENST00000508546 C1orf195Q5TG92 126 aa4.91□□□□□ -1.62
NEDD9-211ENST00000508546 DEFB105AQ8NG35 78 aa4.91□□□□□ -1.62
NEDD9-211ENST00000508546 KRTAP20-1Q3LI63 56 aa4.9□□□□□ -1.63
NEDD9-211ENST00000508546 FAM240AA0A1B0GVK7 77 aa4.89□□□□□ -1.63
NEDD9-211ENST00000508546 LCE2BO14633 110 aa4.89□□□□□ -1.63
NEDD9-211ENST00000508546 RBM3P98179 157 aaKnown RBP4.89□□□□□ -1.63
NEDD9-211ENST00000508546 LOC110117498A0A087WWA1 95 aa4.88□□□□□ -1.63
NEDD9-211ENST00000508546 DSCR8Q96T75 97 aa4.88□□□□□ -1.63
NEDD9-211ENST00000508546 F8WEM9 126 aa4.87□□□□□ -1.63
NEDD9-211ENST00000508546 Q6Q795 121 aa4.87□□□□□ -1.63
NEDD9-211ENST00000508546 SMIM29Q86T20 159 aa4.87□□□□□ -1.63
NEDD9-211ENST00000508546 VPS25Q9BRG1 176 aa4.87□□□□□ -1.63
NEDD9-211ENST00000508546 TRBV7-4A0A0J9YYF1 115 aa4.86□□□□□ -1.63
NEDD9-211ENST00000508546 CCKP06307 115 aa4.86□□□□□ -1.63
NEDD9-211ENST00000508546 ACYP1P07311 99 aa4.86□□□□□ -1.63
NEDD9-211ENST00000508546 PDE6GP18545 87 aa4.86□□□□□ -1.63
NEDD9-211ENST00000508546 C21orf62-AS1Q17RA5 79 aa4.86□□□□□ -1.63
NEDD9-211ENST00000508546 Q6ZQT0 140 aa4.86□□□□□ -1.63
NEDD9-211ENST00000508546 MUC12Q9UKN1 5478 aa4.83□□□□□ -1.64
NEDD9-211ENST00000508546 ATP11AUNQ6ZP68 121 aa4.82□□□□□ -1.64
NEDD9-211ENST00000508546 Q75L30 129 aa4.82□□□□□ -1.64
NEDD9-211ENST00000508546 A0A0G2JQZ4 141 aa4.8□□□□□ -1.64
NEDD9-211ENST00000508546 MT2AP02795 61 aa4.8□□□□□ -1.64
NEDD9-211ENST00000508546 KRTAP19-6Q3LI70 58 aa4.8□□□□□ -1.64
NEDD9-211ENST00000508546 LINC00846Q9NV44 126 aa4.8□□□□□ -1.64
NEDD9-211ENST00000508546 Q6JHZ5 121 aa4.79□□□□□ -1.64
NEDD9-211ENST00000508546 IGFL1Q6UW32 110 aa4.79□□□□□ -1.64
NEDD9-211ENST00000508546 A0A1W2PNM2 257 aa4.78□□□□□ -1.64
NEDD9-211ENST00000508546 LINC00643Q86TS7 51 aa4.78□□□□□ -1.64
NEDD9-211ENST00000508546 UBL5Q9BZL1 73 aa4.78□□□□□ -1.64
NEDD9-211ENST00000508546 A0A1B0GW54 56 aa4.77□□□□□ -1.65
NEDD9-211ENST00000508546 SIGMAR1Q99720 223 aa4.77□□□□□ -1.65
NEDD9-211ENST00000508546 KRTAP9-3Q9BYQ3 159 aa4.77□□□□□ -1.65
NEDD9-211ENST00000508546 MT-ATP8P03928 68 aa4.76□□□□□ -1.65
NEDD9-211ENST00000508546 MT1FP04733 61 aa4.76□□□□□ -1.65
NEDD9-211ENST00000508546 ATP5EP2Q5VTU8 51 aa4.75□□□□□ -1.65
NEDD9-211ENST00000508546 Q6ZVQ6 151 aa4.75□□□□□ -1.65
NEDD9-211ENST00000508546 TRBV7-7A0A0K0K1E9 115 aa4.73□□□□□ -1.65
NEDD9-211ENST00000508546 A0A087WSZ3 146 aa4.72□□□□□ -1.65
NEDD9-211ENST00000508546 IGKV3D-7A0A0C4DH55 119 aa4.72□□□□□ -1.65
NEDD9-211ENST00000508546 KRTAP10-10P60014 251 aa4.72□□□□□ -1.65
NEDD9-211ENST00000508546 NREPQ16612 68 aa4.72□□□□□ -1.65
NEDD9-211ENST00000508546 C20orf166-AS1Q96NR2 134 aa4.71□□□□□ -1.66
NEDD9-211ENST00000508546 CXCL6P80162 114 aa4.7□□□□□ -1.66
NEDD9-211ENST00000508546 Q96NJ1 140 aa4.7□□□□□ -1.66
NEDD9-211ENST00000508546 IMUPQ9GZP8 106 aa4.7□□□□□ -1.66
NEDD9-211ENST00000508546 A8MUU9 505 aa4.69□□□□□ -1.66
NEDD9-211ENST00000508546 SS18L2Q9UHA2 77 aa4.69□□□□□ -1.66
NEDD9-211ENST00000508546 BPY2O14599 106 aa4.68□□□□□ -1.66
NEDD9-211ENST00000508546 SCGB1A1P11684 91 aa4.68□□□□□ -1.66
NEDD9-211ENST00000508546 HIST1H4AP62805 103 aaKnown RBP4.67□□□□□ -1.66
NEDD9-211ENST00000508546 FAM236DA0A1B0GTK5 79 aa4.66□□□□□ -1.66
NEDD9-211ENST00000508546 FAM236CP0DP71 79 aa4.66□□□□□ -1.66
NEDD9-211ENST00000508546 A0A087WVE0 104 aa4.65□□□□□ -1.67
NEDD9-211ENST00000508546 FAM236AA0A1B0GUQ0 79 aa4.64□□□□□ -1.67
NEDD9-211ENST00000508546 FAM236BA0A1B0GV22 79 aa4.64□□□□□ -1.67
NEDD9-211ENST00000508546 MPLKIPQ8TAP9 179 aa4.64□□□□□ -1.67
NEDD9-211ENST00000508546 J3KT08 172 aa4.63□□□□□ -1.67
NEDD9-211ENST00000508546 IGKV4-1P06312 121 aa4.63□□□□□ -1.67
NEDD9-211ENST00000508546 DSCR10P59022 87 aa4.63□□□□□ -1.67
NEDD9-211ENST00000508546 DEFB116Q30KQ4 102 aa4.63□□□□□ -1.67
NEDD9-211ENST00000508546 Q8N9L7 120 aa4.63□□□□□ -1.67
NEDD9-211ENST00000508546 LINC00472Q9H8W2 130 aa4.63□□□□□ -1.67
NEDD9-211ENST00000508546 RBM12B-AS1Q9P1G2 102 aa4.63□□□□□ -1.67
NEDD9-211ENST00000508546 K7EQZ3 153 aa4.62□□□□□ -1.67
NEDD9-211ENST00000508546 KMT2DO14686 5537 aa4.61□□□□□ -1.67
NEDD9-211ENST00000508546 KRTAP16-1A8MUX0 517 aa4.61□□□□□ -1.67
NEDD9-211ENST00000508546 A8MWP4 228 aa4.6□□□□□ -1.67
NEDD9-211ENST00000508546 HRES1P13985 223 aa4.6□□□□□ -1.67
NEDD9-211ENST00000508546 MDN1Q9NU22 5596 aa4.59□□□□□ -1.67
NEDD9-211ENST00000508546 ATOX1O00244 68 aa4.58□□□□□ -1.68
NEDD9-211ENST00000508546 NDUFB1O75438 58 aa4.58□□□□□ -1.68
NEDD9-211ENST00000508546 PRR15Q8IV56 129 aa4.58□□□□□ -1.68
NEDD9-211ENST00000508546 ANAPC13Q9BS18 74 aa4.58□□□□□ -1.68
NEDD9-211ENST00000508546 PCP4P48539 62 aa4.57□□□□□ -1.68
NEDD9-211ENST00000508546 A0A1B0GVX0 72 aa4.56□□□□□ -1.68
NEDD9-211ENST00000508546 HCG22E2RYF7 251 aa4.56□□□□□ -1.68
NEDD9-211ENST00000508546 KRTAP2-3P0C7H8 128 aa4.56□□□□□ -1.68
NEDD9-211ENST00000508546 NOTCH2NLQ7Z3S9 236 aa4.56□□□□□ -1.68
NEDD9-211ENST00000508546 KRTAP2-4Q9BYR9 128 aa4.56□□□□□ -1.68
NEDD9-211ENST00000508546 GPR98Q8WXG9 6306 aa4.54□□□□□ -1.68
NEDD9-211ENST00000508546 IGHV6-1A0A0B4J1U7 121 aa4.54□□□□□ -1.68
NEDD9-211ENST00000508546 WFDC13Q8IUB5 93 aa4.54□□□□□ -1.68
NEDD9-211ENST00000508546 MMP24-AS1A0A0U1RRL7 71 aa4.53□□□□□ -1.68
NEDD9-211ENST00000508546 CASC2Q6XLA1 102 aa4.53□□□□□ -1.68
NEDD9-211ENST00000508546 SMIM20Q8N5G0 67 aa4.53□□□□□ -1.68
NEDD9-211ENST00000508546 C8orf17Q9NRJ1 99 aa4.53□□□□□ -1.68
NEDD9-211ENST00000508546 LINC00313P59037 77 aa4.52□□□□□ -1.69
NEDD9-211ENST00000508546 hDV103S1A0JD37 113 aa4.51□□□□□ -1.69
NEDD9-211ENST00000508546 SERP2Q8N6R1 65 aa4.51□□□□□ -1.69
NEDD9-211ENST00000508546 TRAV7A0A075B6U4 112 aa4.5□□□□□ -1.69
NEDD9-211ENST00000508546 C8orf87E5RJ46 101 aa4.5□□□□□ -1.69
NEDD9-211ENST00000508546 COX7CP15954 63 aa4.49□□□□□ -1.69
NEDD9-211ENST00000508546 KRTAP5-9P26371 169 aa4.49□□□□□ -1.69
NEDD9-211ENST00000508546 Q8N9P0 234 aaPredicted RBP4.49□□□□□ -1.69
NEDD9-211ENST00000508546 OCR1Q9BZK8 76 aa4.49□□□□□ -1.69
NEDD9-211ENST00000508546 TMEM254Q8TBM7 123 aa4.48□□□□□ -1.69
NEDD9-211ENST00000508546 UQCRQO14949 82 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms