RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 PLECQ15149 4684 aaKnown RBP8.06□□□□□ -1.12
LETM1-203ENST00000505551 ALMS1Q8TCU4 4167 aa8.06□□□□□ -1.12
LETM1-203ENST00000505551 MEGF8Q7Z7M0 2845 aa8.05□□□□□ -1.12
LETM1-203ENST00000505551 C8orf17Q9NRJ1 99 aa8.05□□□□□ -1.12
LETM1-203ENST00000505551 Q96NJ1 140 aa8.04□□□□□ -1.12
LETM1-203ENST00000505551 KRTAP1-5Q9BYS1 174 aa8.04□□□□□ -1.12
LETM1-203ENST00000505551 P0C880 135 aa8.04□□□□□ -1.12
LETM1-203ENST00000505551 UBE2DNLQ8IWF7 75 aa8.03□□□□□ -1.12
LETM1-203ENST00000505551 KRTAP16-1A8MUX0 517 aa8.02□□□□□ -1.12
LETM1-203ENST00000505551 MIR22HGQ0VDD5 57 aa8.02□□□□□ -1.12
LETM1-203ENST00000505551 SPATA8Q6RVD6 105 aa8.01□□□□□ -1.13
LETM1-203ENST00000505551 TGP01266 2768 aa8.01□□□□□ -1.13
LETM1-203ENST00000505551 A0A096LNI7 61 aa7.99□□□□□ -1.13
LETM1-203ENST00000505551 STARD9Q9P2P6 4700 aa7.98□□□□□ -1.13
LETM1-203ENST00000505551 NOTCH2NLQ7Z3S9 236 aa7.96□□□□□ -1.13
LETM1-203ENST00000505551 MRPL34Q9BQ48 92 aaKnown RBP7.96□□□□□ -1.13
LETM1-203ENST00000505551 A0A1B0GVX0 72 aa7.96□□□□□ -1.14
LETM1-203ENST00000505551 J3QL48 77 aa7.96□□□□□ -1.14
LETM1-203ENST00000505551 APLNQ9ULZ1 77 aa7.96□□□□□ -1.14
LETM1-203ENST00000505551 ACYP2P14621 99 aa7.95□□□□□ -1.14
LETM1-203ENST00000505551 KRTAP11-1Q8IUC1 163 aa7.94□□□□□ -1.14
LETM1-203ENST00000505551 KMT2AQ03164 3969 aa7.93□□□□□ -1.14
LETM1-203ENST00000505551 A0A1B0GU69 56 aa7.92□□□□□ -1.14
LETM1-203ENST00000505551 KRTAP13-3Q3SY46 172 aa7.92□□□□□ -1.14
LETM1-203ENST00000505551 DYNC2H1Q8NCM8 4307 aaKnown RBP7.91□□□□□ -1.14
LETM1-203ENST00000505551 CHTF8P0CG12 524 aa7.89□□□□□ -1.15
LETM1-203ENST00000505551 DMAC1Q96GE9 116 aa7.89□□□□□ -1.15
LETM1-203ENST00000505551 Q5W150 140 aa7.87□□□□□ -1.15
LETM1-203ENST00000505551 UQCR11O14957 56 aa7.87□□□□□ -1.15
LETM1-203ENST00000505551 FBN3Q75N90 2809 aa7.87□□□□□ -1.15
LETM1-203ENST00000505551 CDK2AP2O75956 126 aa7.85□□□□□ -1.15
LETM1-203ENST00000505551 KRTAP13-1Q8IUC0 172 aa7.84□□□□□ -1.15
LETM1-203ENST00000505551 NBDYA0A0U1RRE5 68 aa7.83□□□□□ -1.16
LETM1-203ENST00000505551 VPS13DQ5THJ4 4388 aa7.82□□□□□ -1.16
LETM1-203ENST00000505551 NUPR2A6NF83 97 aa7.82□□□□□ -1.16
LETM1-203ENST00000505551 IGLV9-49A0A0B4J1Y8 123 aa7.81□□□□□ -1.16
LETM1-203ENST00000505551 DNAH2Q9P225 4427 aa7.81□□□□□ -1.16
LETM1-203ENST00000505551 SEC61BP60468 96 aaKnown RBP7.81□□□□□ -1.16
LETM1-203ENST00000505551 ZNF861PO60384 105 aa7.8□□□□□ -1.16
LETM1-203ENST00000505551 NDUFAF8A1L188 74 aa7.8□□□□□ -1.16
LETM1-203ENST00000505551 PANO1I0J062 215 aa7.78□□□□□ -1.16
LETM1-203ENST00000505551 LINC00483Q53H64 154 aa7.77□□□□□ -1.17
LETM1-203ENST00000505551 KRTAP25-1Q3LHN0 102 aa7.77□□□□□ -1.17
LETM1-203ENST00000505551 HECTD4Q9Y4D8 3996 aa7.75□□□□□ -1.17
LETM1-203ENST00000505551 FLG2Q5D862 2391 aaPredicted RBP7.74□□□□□ -1.17
LETM1-203ENST00000505551 Q6ZRN7 208 aaPredicted RBP7.74□□□□□ -1.17
LETM1-203ENST00000505551 LUZP6Q538Z0 58 aa7.74□□□□□ -1.17
LETM1-203ENST00000505551 C20orf166-AS1Q96NR2 134 aa7.73□□□□□ -1.17
LETM1-203ENST00000505551 C14orf177Q52M58 125 aa7.72□□□□□ -1.17
LETM1-203ENST00000505551 FRAS1Q86XX4 4008 aa7.72□□□□□ -1.17
LETM1-203ENST00000505551 LY6G6CO95867 125 aa7.72□□□□□ -1.17
LETM1-203ENST00000505551 WWC2-AS2Q96NR7 200 aa7.71□□□□□ -1.18
LETM1-203ENST00000505551 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.7□□□□□ -1.18
LETM1-203ENST00000505551 IGLV7-43P04211 117 aa7.68□□□□□ -1.18
LETM1-203ENST00000505551 DNAH6Q9C0G6 4158 aa7.68□□□□□ -1.18
LETM1-203ENST00000505551 A0A087WTM6 91 aa7.68□□□□□ -1.18
LETM1-203ENST00000505551 A8MUU9 505 aa7.67□□□□□ -1.18
LETM1-203ENST00000505551 IGKV2-30P06310 120 aa7.67□□□□□ -1.18
LETM1-203ENST00000505551 FAM229AH3BQW9 127 aa7.65□□□□□ -1.18
LETM1-203ENST00000505551 HYDINQ4G0P3 5121 aa7.65□□□□□ -1.18
LETM1-203ENST00000505551 SPINK6Q6UWN8 80 aa7.64□□□□□ -1.19
LETM1-203ENST00000505551 DNAH17Q9UFH2 4485 aa7.62□□□□□ -1.19
LETM1-203ENST00000505551 IGLV5-52A0A0A0MRZ9 124 aa7.62□□□□□ -1.19
LETM1-203ENST00000505551 DNAH8Q96JB1 4490 aa7.61□□□□□ -1.19
LETM1-203ENST00000505551 DNAH11Q96DT5 4516 aa7.6□□□□□ -1.19
LETM1-203ENST00000505551 CRIPTQ9P021 101 aa7.6□□□□□ -1.19
LETM1-203ENST00000505551 SPACA4Q8TDM5 124 aa7.59□□□□□ -1.19
LETM1-203ENST00000505551 ANAPC11Q9NYG5 84 aa7.58□□□□□ -1.2
LETM1-203ENST00000505551 DNAH5Q8TE73 4624 aa7.55□□□□□ -1.2
LETM1-203ENST00000505551 LINC00304Q8N9R0 145 aa7.54□□□□□ -1.2
LETM1-203ENST00000505551 KRTAP10-2P60368 255 aa7.53□□□□□ -1.2
LETM1-203ENST00000505551 PSORS1C2Q9UIG4 136 aa7.53□□□□□ -1.2
LETM1-203ENST00000505551 IGKV2D-30A0A075B6S6 120 aa7.53□□□□□ -1.2
LETM1-203ENST00000505551 SPINK1P00995 79 aa7.52□□□□□ -1.21
LETM1-203ENST00000505551 H0YAA0 97 aa7.51□□□□□ -1.21
LETM1-203ENST00000505551 K7ERS5 55 aa7.5□□□□□ -1.21
LETM1-203ENST00000505551 SPINT4Q6UDR6 99 aa7.49□□□□□ -1.21
LETM1-203ENST00000505551 Q6ZSA8 131 aa7.49□□□□□ -1.21
LETM1-203ENST00000505551 FAT2Q9NYQ8 4349 aa7.48□□□□□ -1.21
LETM1-203ENST00000505551 LRP1BQ9NZR2 4599 aa7.47□□□□□ -1.21
LETM1-203ENST00000505551 CIRBP-AS1Q8TBR5 109 aa7.46□□□□□ -1.22
LETM1-203ENST00000505551 PKHD1P08F94 4074 aa7.46□□□□□ -1.22
LETM1-203ENST00000505551 PKD1P98161 4303 aa7.45□□□□□ -1.22
LETM1-203ENST00000505551 SSBP3-AS1Q7Z2R9 100 aa7.43□□□□□ -1.22
LETM1-203ENST00000505551 SACSQ9NZJ4 4579 aa7.41□□□□□ -1.22
LETM1-203ENST00000505551 KRTAP10-1P60331 282 aa7.41□□□□□ -1.22
LETM1-203ENST00000505551 KRTAP15-1Q3LI76 137 aa7.39□□□□□ -1.23
LETM1-203ENST00000505551 VPS13BQ7Z7G8 4022 aa7.38□□□□□ -1.23
LETM1-203ENST00000505551 A0A1B0GU33 70 aa7.35□□□□□ -1.23
LETM1-203ENST00000505551 TYMSOSQ8TAI1 123 aa7.35□□□□□ -1.23
LETM1-203ENST00000505551 KRTAP21-3Q3LHN1 58 aa7.34□□□□□ -1.23
LETM1-203ENST00000505551 Q8N1X5 172 aa7.34□□□□□ -1.23
LETM1-203ENST00000505551 H1FX-AS1Q4G0G2 97 aa7.32□□□□□ -1.24
LETM1-203ENST00000505551 KMT2CQ8NEZ4 4911 aaKnown RBP7.3□□□□□ -1.24
LETM1-203ENST00000505551 DMBT1Q9UGM3 2413 aaPredicted RBP7.27□□□□□ -1.24
LETM1-203ENST00000505551 SMR3BP02814 79 aaPredicted RBP7.26□□□□□ -1.25
LETM1-203ENST00000505551 FAT1Q14517 4588 aa7.26□□□□□ -1.25
LETM1-203ENST00000505551 DYNC1H1Q14204 4646 aaKnown RBP7.24□□□□□ -1.25
LETM1-203ENST00000505551 KRTAP13-2Q52LG2 175 aa7.22□□□□□ -1.25
LETM1-203ENST00000505551 RYR2Q92736 4967 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms