RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 SRRM2Q9UQ35 2752 aaKnown RBP2.31□□□□□ -2.04
PCDH11X-208ENST00000504220 CSNK1G2-AS1Q8NCQ2 148 aa2.31□□□□□ -2.04
PCDH11X-208ENST00000504220 ASB16-AS1Q495Z4 193 aa2.31□□□□□ -2.04
PCDH11X-208ENST00000504220 PRKDCP78527 4128 aaKnown RBP2.31□□□□□ -2.04
PCDH11X-208ENST00000504220 A8MWP4 228 aa2.31□□□□□ -2.04
PCDH11X-208ENST00000504220 IGLV1-50A0A075B6I6 118 aa2.3□□□□□ -2.04
PCDH11X-208ENST00000504220 C15orf56Q8N910 161 aa2.3□□□□□ -2.04
PCDH11X-208ENST00000504220 TYMSOSQ8TAI1 123 aa2.3□□□□□ -2.04
PCDH11X-208ENST00000504220 MRPL34Q9BQ48 92 aaKnown RBP2.3□□□□□ -2.04
PCDH11X-208ENST00000504220 MYCBP2O75592 4640 aa2.3□□□□□ -2.04
PCDH11X-208ENST00000504220 C9orf92A6NGG3 77 aa2.3□□□□□ -2.04
PCDH11X-208ENST00000504220 SMR3BP02814 79 aaPredicted RBP2.3□□□□□ -2.04
PCDH11X-208ENST00000504220 APLNQ9ULZ1 77 aa2.3□□□□□ -2.04
PCDH11X-208ENST00000504220 GVQW2A0A096LPI5 108 aaPredicted RBP2.3□□□□□ -2.04
PCDH11X-208ENST00000504220 A0A0D9SG42 100 aa2.3□□□□□ -2.04
PCDH11X-208ENST00000504220 NBDYA0A0U1RRE5 68 aa2.3□□□□□ -2.04
PCDH11X-208ENST00000504220 C9orf163Q8N9P6 203 aa2.3□□□□□ -2.04
PCDH11X-208ENST00000504220 KCNQ1DNQ9H478 68 aa2.3□□□□□ -2.04
PCDH11X-208ENST00000504220 UQCR11O14957 56 aa2.29□□□□□ -2.04
PCDH11X-208ENST00000504220 KLK9Q2XQG4 91 aa2.29□□□□□ -2.04
PCDH11X-208ENST00000504220 Q8N1X5 172 aa2.29□□□□□ -2.04
PCDH11X-208ENST00000504220 C8orf17Q9NRJ1 99 aa2.29□□□□□ -2.04
PCDH11X-208ENST00000504220 MEGF8Q7Z7M0 2845 aa2.28□□□□□ -2.04
PCDH11X-208ENST00000504220 DNAH9Q9NYC9 4486 aa2.28□□□□□ -2.04
PCDH11X-208ENST00000504220 MIR22HGQ0VDD5 57 aa2.28□□□□□ -2.04
PCDH11X-208ENST00000504220 CSAG1Q6PB30 78 aa2.28□□□□□ -2.04
PCDH11X-208ENST00000504220 H3BPC8 53 aa2.28□□□□□ -2.04
PCDH11X-208ENST00000504220 LINC01558Q9Y6Z2 57 aa2.28□□□□□ -2.04
PCDH11X-208ENST00000504220 FAM229AH3BQW9 127 aa2.27□□□□□ -2.05
PCDH11X-208ENST00000504220 CRIPTQ9P021 101 aa2.27□□□□□ -2.05
PCDH11X-208ENST00000504220 DNAH6Q9C0G6 4158 aa2.27□□□□□ -2.05
PCDH11X-208ENST00000504220 KRTAP26-1Q6PEX3 210 aa2.27□□□□□ -2.05
PCDH11X-208ENST00000504220 A0A1B0GW54 56 aa2.26□□□□□ -2.05
PCDH11X-208ENST00000504220 DYNC2H1Q8NCM8 4307 aaKnown RBP2.26□□□□□ -2.05
PCDH11X-208ENST00000504220 DNAH8Q96JB1 4490 aa2.26□□□□□ -2.05
PCDH11X-208ENST00000504220 A0A1B0GVX0 72 aa2.26□□□□□ -2.05
PCDH11X-208ENST00000504220 H3BNG1 76 aa2.26□□□□□ -2.05
PCDH11X-208ENST00000504220 DNAH10Q8IVF4 4471 aa2.26□□□□□ -2.05
PCDH11X-208ENST00000504220 PLA2G2DQ9UNK4 145 aa2.26□□□□□ -2.05
PCDH11X-208ENST00000504220 KRTAP15-1Q3LI76 137 aa2.26□□□□□ -2.05
PCDH11X-208ENST00000504220 SPRR4Q96PI1 79 aa2.26□□□□□ -2.05
PCDH11X-208ENST00000504220 IGLV5-48A0A075B6I7 105 aa2.25□□□□□ -2.05
PCDH11X-208ENST00000504220 PSORS1C2Q9UIG4 136 aa2.25□□□□□ -2.05
PCDH11X-208ENST00000504220 HUWE1Q7Z6Z7 4374 aaKnown RBP2.25□□□□□ -2.05
PCDH11X-208ENST00000504220 ZNF861PO60384 105 aa2.25□□□□□ -2.05
PCDH11X-208ENST00000504220 DNAH17Q9UFH2 4485 aa2.24□□□□□ -2.05
PCDH11X-208ENST00000504220 KRTAP4-16G5E9R7 235 aaPredicted RBP2.24□□□□□ -2.05
PCDH11X-208ENST00000504220 LINC00472Q9H8W2 130 aa2.24□□□□□ -2.05
PCDH11X-208ENST00000504220 SPANXA2-OT1Q8N9U9 137 aa2.23□□□□□ -2.05
PCDH11X-208ENST00000504220 WWC2-AS2Q96NR7 200 aa2.23□□□□□ -2.05
PCDH11X-208ENST00000504220 KRTAP17-1Q9BYP8 105 aa2.23□□□□□ -2.05
PCDH11X-208ENST00000504220 A0A087WTM6 91 aa2.23□□□□□ -2.05
PCDH11X-208ENST00000504220 LCE2BO14633 110 aa2.23□□□□□ -2.05
PCDH11X-208ENST00000504220 LINC00483Q53H64 154 aa2.22□□□□□ -2.05
PCDH11X-208ENST00000504220 IGLV5-37A0A075B6J1 123 aa2.22□□□□□ -2.05
PCDH11X-208ENST00000504220 KRTAP29-1A8MX34 341 aaPredicted RBP2.21□□□□□ -2.05
PCDH11X-208ENST00000504220 SPATA8Q6RVD6 105 aa2.21□□□□□ -2.06
PCDH11X-208ENST00000504220 LINC00304Q8N9R0 145 aa2.21□□□□□ -2.06
PCDH11X-208ENST00000504220 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.21□□□□□ -2.06
PCDH11X-208ENST00000504220 HRES1P13985 223 aa2.21□□□□□ -2.06
PCDH11X-208ENST00000504220 COX6B2Q6YFQ2 88 aa2.21□□□□□ -2.06
PCDH11X-208ENST00000504220 IGLV7-43P04211 117 aa2.2□□□□□ -2.06
PCDH11X-208ENST00000504220 TLX1NBP0CAT3 122 aa2.2□□□□□ -2.06
PCDH11X-208ENST00000504220 TNP2Q05952 138 aa2.2□□□□□ -2.06
PCDH11X-208ENST00000504220 DNAH2Q9P225 4427 aa2.2□□□□□ -2.06
PCDH11X-208ENST00000504220 A8MUU9 505 aa2.19□□□□□ -2.06
PCDH11X-208ENST00000504220 RYR2Q92736 4967 aa2.19□□□□□ -2.06
PCDH11X-208ENST00000504220 STARD9Q9P2P6 4700 aa2.19□□□□□ -2.06
PCDH11X-208ENST00000504220 KRTAP25-1Q3LHN0 102 aa2.19□□□□□ -2.06
PCDH11X-208ENST00000504220 IGLV7-46A0A075B6I9 117 aa2.18□□□□□ -2.06
PCDH11X-208ENST00000504220 SACSQ9NZJ4 4579 aa2.18□□□□□ -2.06
PCDH11X-208ENST00000504220 MMP24-AS1A0A0U1RRL7 71 aa2.18□□□□□ -2.06
PCDH11X-208ENST00000504220 A0A1B0GU33 70 aa2.18□□□□□ -2.06
PCDH11X-208ENST00000504220 RYR3Q15413 4870 aa2.17□□□□□ -2.06
PCDH11X-208ENST00000504220 KMT2CQ8NEZ4 4911 aaKnown RBP2.17□□□□□ -2.06
PCDH11X-208ENST00000504220 J3QL48 77 aa2.17□□□□□ -2.06
PCDH11X-208ENST00000504220 C20orf166-AS1Q96NR2 134 aa2.16□□□□□ -2.06
PCDH11X-208ENST00000504220 PKHD1P08F94 4074 aa2.16□□□□□ -2.06
PCDH11X-208ENST00000504220 HECTD4Q9Y4D8 3996 aa2.16□□□□□ -2.06
PCDH11X-208ENST00000504220 BIRC6Q9NR09 4857 aa2.16□□□□□ -2.06
PCDH11X-208ENST00000504220 KRTAP1-5Q9BYS1 174 aa2.16□□□□□ -2.06
PCDH11X-208ENST00000504220 PLECQ15149 4684 aaKnown RBP2.15□□□□□ -2.06
PCDH11X-208ENST00000504220 HYDINQ4G0P3 5121 aa2.15□□□□□ -2.07
PCDH11X-208ENST00000504220 DNAH11Q96DT5 4516 aa2.15□□□□□ -2.07
PCDH11X-208ENST00000504220 LORP23490 312 aaPredicted RBP2.15□□□□□ -2.07
PCDH11X-208ENST00000504220 LUZP6Q538Z0 58 aa2.14□□□□□ -2.07
PCDH11X-208ENST00000504220 CAMK2N1Q7Z7J9 78 aa2.14□□□□□ -2.07
PCDH11X-208ENST00000504220 Q5W150 140 aa2.14□□□□□ -2.07
PCDH11X-208ENST00000504220 LOC100996750A0A140TA64 210 aa2.14□□□□□ -2.07
PCDH11X-208ENST00000504220 KRTAP16-1A8MUX0 517 aa2.14□□□□□ -2.07
PCDH11X-208ENST00000504220 PANO1I0J062 215 aa2.14□□□□□ -2.07
PCDH11X-208ENST00000504220 KRTAP4-6Q9BYQ5 205 aa2.14□□□□□ -2.07
PCDH11X-208ENST00000504220 SPRR1AP35321 89 aa2.13□□□□□ -2.07
PCDH11X-208ENST00000504220 SEC61BP60468 96 aaKnown RBP2.13□□□□□ -2.07
PCDH11X-208ENST00000504220 PKHD1L1Q86WI1 4243 aa2.13□□□□□ -2.07
PCDH11X-208ENST00000504220 NDUFAF8A1L188 74 aa2.13□□□□□ -2.07
PCDH11X-208ENST00000504220 KRTAP13-3Q3SY46 172 aa2.12□□□□□ -2.07
PCDH11X-208ENST00000504220 KRTAP10-8P60410 259 aa2.11□□□□□ -2.07
PCDH11X-208ENST00000504220 Q6ZSA8 131 aa2.11□□□□□ -2.07
PCDH11X-208ENST00000504220 FAT2Q9NYQ8 4349 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms