RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 H3BQ85 93 aa8.88□□□□□ -0.99
SCLT1-204ENST00000503215 CCKP06307 115 aa8.88□□□□□ -0.99
SCLT1-204ENST00000503215 C9orf92A6NGG3 77 aa8.87□□□□□ -0.99
SCLT1-204ENST00000503215 SMIM11BQ8TCY0 68 aa8.87□□□□□ -0.99
SCLT1-204ENST00000503215 LIMD2Q9BT23 127 aa8.87□□□□□ -0.99
SCLT1-204ENST00000503215 ORMDL1Q9P0S3 153 aa8.87□□□□□ -0.99
SCLT1-204ENST00000503215 IGLV5-48A0A075B6I7 105 aa8.85□□□□□ -0.99
SCLT1-204ENST00000503215 TMEM256-PLSCR3K7ERE1 68 aa8.85□□□□□ -0.99
SCLT1-204ENST00000503215 LINC00846Q9NV44 126 aa8.85□□□□□ -0.99
SCLT1-204ENST00000503215 CD164Q04900 197 aa8.84□□□□□ -0.99
SCLT1-204ENST00000503215 PCOTHQ58A44 107 aa8.84□□□□□ -0.99
SCLT1-204ENST00000503215 C14orf132Q9NPU4 83 aa8.83□□□□□ -1
SCLT1-204ENST00000503215 KRTAP19-2Q3LHN2 52 aa8.82□□□□□ -1
SCLT1-204ENST00000503215 C1orf195Q5TG92 126 aa8.81□□□□□ -1
SCLT1-204ENST00000503215 PDE6GP18545 87 aa8.8□□□□□ -1
SCLT1-204ENST00000503215 UBL5Q9BZL1 73 aa8.79□□□□□ -1
SCLT1-204ENST00000503215 Q5XG85 94 aa8.78□□□□□ -1
SCLT1-204ENST00000503215 IGLV8-61A0A075B6I0 122 aa8.77□□□□□ -1.01
SCLT1-204ENST00000503215 IGKV3D-7A0A0C4DH55 119 aa8.77□□□□□ -1.01
SCLT1-204ENST00000503215 GHRHP01286 108 aa8.76□□□□□ -1.01
SCLT1-204ENST00000503215 TRAV7A0A075B6U4 112 aa8.75□□□□□ -1.01
SCLT1-204ENST00000503215 KRTAP9-6A0A140TA67 174 aa8.75□□□□□ -1.01
SCLT1-204ENST00000503215 SERP1Q9Y6X1 66 aa8.75□□□□□ -1.01
SCLT1-204ENST00000503215 LOC110117498A0A087WWA1 95 aa8.74□□□□□ -1.01
SCLT1-204ENST00000503215 NDUFC1O43677 76 aa8.74□□□□□ -1.01
SCLT1-204ENST00000503215 ATP5EP56381 51 aaPredicted RBP8.74□□□□□ -1.01
SCLT1-204ENST00000503215 LINC00575Q6W349 94 aa8.74□□□□□ -1.01
SCLT1-204ENST00000503215 KLKP1Q107X0 134 aa8.72□□□□□ -1.01
SCLT1-204ENST00000503215 CXCL6P80162 114 aa8.71□□□□□ -1.02
SCLT1-204ENST00000503215 Q6ZQY7 126 aa8.71□□□□□ -1.02
SCLT1-204ENST00000503215 FAM236DA0A1B0GTK5 79 aa8.7□□□□□ -1.02
SCLT1-204ENST00000503215 FAM236CP0DP71 79 aa8.7□□□□□ -1.02
SCLT1-204ENST00000503215 MT1HP80294 61 aa8.7□□□□□ -1.02
SCLT1-204ENST00000503215 A0A087WVE0 104 aa8.69□□□□□ -1.02
SCLT1-204ENST00000503215 CYSTM1Q9H1C7 97 aa8.69□□□□□ -1.02
SCLT1-204ENST00000503215 RBM3P98179 157 aaKnown RBP8.68□□□□□ -1.02
SCLT1-204ENST00000503215 F8WEM9 126 aa8.67□□□□□ -1.02
SCLT1-204ENST00000503215 RPL37P61927 97 aaKnown RBP8.67□□□□□ -1.02
SCLT1-204ENST00000503215 DSCR8Q96T75 97 aa8.67□□□□□ -1.02
SCLT1-204ENST00000503215 IGFL1Q6UW32 110 aa8.66□□□□□ -1.02
SCLT1-204ENST00000503215 Q6ZQT0 140 aa8.66□□□□□ -1.02
SCLT1-204ENST00000503215 SMIM26A0A096LP01 95 aa8.65□□□□□ -1.02
SCLT1-204ENST00000503215 H7BZZ5 65 aa8.63□□□□□ -1.03
SCLT1-204ENST00000503215 C20orf197Q8N268 126 aa8.62□□□□□ -1.03
SCLT1-204ENST00000503215 PRO0628Q9UI54 55 aa8.62□□□□□ -1.03
SCLT1-204ENST00000503215 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.61□□□□□ -1.03
SCLT1-204ENST00000503215 C4orf26Q17RF5 130 aa8.61□□□□□ -1.03
SCLT1-204ENST00000503215 Q6ZVQ6 151 aa8.58□□□□□ -1.04
SCLT1-204ENST00000503215 FSIP2Q5CZC0 6907 aa8.55□□□□□ -1.04
SCLT1-204ENST00000503215 A0A1B0GW54 56 aa8.55□□□□□ -1.04
SCLT1-204ENST00000503215 TRBV7-4A0A0J9YYF1 115 aa8.54□□□□□ -1.04
SCLT1-204ENST00000503215 KRTAP10-6P60371 365 aaPredicted RBP8.54□□□□□ -1.04
SCLT1-204ENST00000503215 CRCT1Q9UGL9 99 aa8.51□□□□□ -1.05
SCLT1-204ENST00000503215 COX6B2Q6YFQ2 88 aa8.5□□□□□ -1.05
SCLT1-204ENST00000503215 FLGP20930 4061 aaPredicted RBP8.5□□□□□ -1.05
SCLT1-204ENST00000503215 Q75L30 129 aa8.48□□□□□ -1.05
SCLT1-204ENST00000503215 M0R2T5 61 aa8.48□□□□□ -1.05
SCLT1-204ENST00000503215 NREPQ16612 68 aa8.46□□□□□ -1.06
SCLT1-204ENST00000503215 Q96NJ1 140 aa8.46□□□□□ -1.06
SCLT1-204ENST00000503215 ATP11AUNQ6ZP68 121 aa8.45□□□□□ -1.06
SCLT1-204ENST00000503215 TMEM254Q8TBM7 123 aa8.45□□□□□ -1.06
SCLT1-204ENST00000503215 BPY2O14599 106 aa8.44□□□□□ -1.06
SCLT1-204ENST00000503215 A0A087WSZ3 146 aa8.43□□□□□ -1.06
SCLT1-204ENST00000503215 A0A1W2PNM2 257 aa8.4□□□□□ -1.06
SCLT1-204ENST00000503215 SNURFQ9Y675 71 aa8.4□□□□□ -1.06
SCLT1-204ENST00000503215 OCR1Q9BZK8 76 aa8.39□□□□□ -1.07
SCLT1-204ENST00000503215 C20orf166-AS1Q96NR2 134 aa8.38□□□□□ -1.07
SCLT1-204ENST00000503215 A8MUU9 505 aa8.37□□□□□ -1.07
SCLT1-204ENST00000503215 DSCR10P59022 87 aa8.36□□□□□ -1.07
SCLT1-204ENST00000503215 IGKV4-1P06312 121 aa8.35□□□□□ -1.07
SCLT1-204ENST00000503215 LOC100996750A0A140TA64 210 aa8.34□□□□□ -1.07
SCLT1-204ENST00000503215 KRTAP4-6Q9BYQ5 205 aa8.34□□□□□ -1.07
SCLT1-204ENST00000503215 KRTAP16-1A8MUX0 517 aa8.31□□□□□ -1.08
SCLT1-204ENST00000503215 NOTCH2NLQ7Z3S9 236 aa8.3□□□□□ -1.08
SCLT1-204ENST00000503215 Q1T7F1 81 aa8.29□□□□□ -1.08
SCLT1-204ENST00000503215 DEFB116Q30KQ4 102 aa8.28□□□□□ -1.08
SCLT1-204ENST00000503215 NDUFB1O75438 58 aa8.26□□□□□ -1.09
SCLT1-204ENST00000503215 V9GYY9 64 aa8.26□□□□□ -1.09
SCLT1-204ENST00000503215 hDV103S1A0JD37 113 aa8.25□□□□□ -1.09
SCLT1-204ENST00000503215 LINC00313P59037 77 aa8.25□□□□□ -1.09
SCLT1-204ENST00000503215 PRR15Q8IV56 129 aa8.25□□□□□ -1.09
SCLT1-204ENST00000503215 BRK1Q8WUW1 75 aa8.25□□□□□ -1.09
SCLT1-204ENST00000503215 CYP4F30PQ9H0H9 118 aa8.25□□□□□ -1.09
SCLT1-204ENST00000503215 LINC00472Q9H8W2 130 aa8.24□□□□□ -1.09
SCLT1-204ENST00000503215 ZCCHC13Q8WW36 166 aaKnown RBP8.23□□□□□ -1.09
SCLT1-204ENST00000503215 KRTAP9-8Q9BYQ0 159 aa8.23□□□□□ -1.09
SCLT1-204ENST00000503215 H3BPC8 53 aa8.19□□□□□ -1.1
SCLT1-204ENST00000503215 IGHV6-1A0A0B4J1U7 121 aa8.18□□□□□ -1.1
SCLT1-204ENST00000503215 MPLKIPQ8TAP9 179 aa8.16□□□□□ -1.1
SCLT1-204ENST00000503215 HRES1P13985 223 aa8.15□□□□□ -1.1
SCLT1-204ENST00000503215 Q8N9L7 120 aa8.14□□□□□ -1.11
SCLT1-204ENST00000503215 SPANXA2-OT1Q8N9U9 137 aa8.13□□□□□ -1.11
SCLT1-204ENST00000503215 C1orf64Q8NEQ6 169 aa8.13□□□□□ -1.11
SCLT1-204ENST00000503215 SEC61GP60059 68 aa8.11□□□□□ -1.11
SCLT1-204ENST00000503215 A0A1B0GVX0 72 aa8.1□□□□□ -1.11
SCLT1-204ENST00000503215 HCG22E2RYF7 251 aa8.1□□□□□ -1.11
SCLT1-204ENST00000503215 MT2AP02795 61 aa8.1□□□□□ -1.11
SCLT1-204ENST00000503215 MP68P56378 58 aa8.1□□□□□ -1.11
SCLT1-204ENST00000503215 PMAIP1Q13794 54 aa8.1□□□□□ -1.11
SCLT1-204ENST00000503215 C8orf87E5RJ46 101 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms