RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 IGKV2D-30A0A075B6S6 120 aa6.43□□□□□ -1.38
TRAPPC12-223ENST00000497597 IGKV2-30P06310 120 aa6.43□□□□□ -1.38
TRAPPC12-223ENST00000497597 Q5W150 140 aa6.42□□□□□ -1.38
TRAPPC12-223ENST00000497597 KRTAP1-5Q9BYS1 174 aa6.41□□□□□ -1.38
TRAPPC12-223ENST00000497597 RTL8CO15255 209 aa6.41□□□□□ -1.38
TRAPPC12-223ENST00000497597 PANO1I0J062 215 aa6.39□□□□□ -1.39
TRAPPC12-223ENST00000497597 UQCR11O14957 56 aa6.38□□□□□ -1.39
TRAPPC12-223ENST00000497597 Q6ZR54 194 aa6.37□□□□□ -1.39
TRAPPC12-223ENST00000497597 PLAC8Q9NZF1 115 aa6.35□□□□□ -1.39
TRAPPC12-223ENST00000497597 Q96NJ1 140 aa6.35□□□□□ -1.39
TRAPPC12-223ENST00000497597 CRIPTQ9P021 101 aa6.35□□□□□ -1.39
TRAPPC12-223ENST00000497597 C14orf177Q52M58 125 aa6.34□□□□□ -1.39
TRAPPC12-223ENST00000497597 SPRR1BP22528 89 aa6.34□□□□□ -1.4
TRAPPC12-223ENST00000497597 TGP01266 2768 aa6.33□□□□□ -1.4
TRAPPC12-223ENST00000497597 ZNF706Q9Y5V0 76 aaPredicted RBP6.32□□□□□ -1.4
TRAPPC12-223ENST00000497597 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.32□□□□□ -1.4
TRAPPC12-223ENST00000497597 PLA2G1BP04054 148 aaKnown RBP6.31□□□□□ -1.4
TRAPPC12-223ENST00000497597 C1orf134Q5TEV5 83 aa6.3□□□□□ -1.4
TRAPPC12-223ENST00000497597 PSORS1C2Q9UIG4 136 aa6.28□□□□□ -1.4
TRAPPC12-223ENST00000497597 Q8N1X5 172 aa6.27□□□□□ -1.41
TRAPPC12-223ENST00000497597 KRTAP21-3Q3LHN1 58 aa6.27□□□□□ -1.41
TRAPPC12-223ENST00000497597 FRAS1Q86XX4 4008 aa6.26□□□□□ -1.41
TRAPPC12-223ENST00000497597 SPATA8Q6RVD6 105 aa6.25□□□□□ -1.41
TRAPPC12-223ENST00000497597 WWC2-AS2Q96NR7 200 aa6.25□□□□□ -1.41
TRAPPC12-223ENST00000497597 DNAH9Q9NYC9 4486 aa6.24□□□□□ -1.41
TRAPPC12-223ENST00000497597 SPACA4Q8TDM5 124 aa6.23□□□□□ -1.41
TRAPPC12-223ENST00000497597 FAM229AH3BQW9 127 aa6.23□□□□□ -1.41
TRAPPC12-223ENST00000497597 DMAC1Q96GE9 116 aa6.23□□□□□ -1.41
TRAPPC12-223ENST00000497597 KRTAP24-1Q3LI83 254 aa6.22□□□□□ -1.41
TRAPPC12-223ENST00000497597 ASB16-AS1Q495Z4 193 aa6.21□□□□□ -1.42
TRAPPC12-223ENST00000497597 MEGF8Q7Z7M0 2845 aa6.21□□□□□ -1.42
TRAPPC12-223ENST00000497597 CMYA5Q8N3K9 4069 aa6.2□□□□□ -1.42
TRAPPC12-223ENST00000497597 FBN3Q75N90 2809 aa6.19□□□□□ -1.42
TRAPPC12-223ENST00000497597 ZNF861PO60384 105 aa6.19□□□□□ -1.42
TRAPPC12-223ENST00000497597 SSBP3-AS1Q7Z2R9 100 aa6.19□□□□□ -1.42
TRAPPC12-223ENST00000497597 NBDYA0A0U1RRE5 68 aa6.17□□□□□ -1.42
TRAPPC12-223ENST00000497597 DNAH1Q9P2D7 4330 aa6.17□□□□□ -1.42
TRAPPC12-223ENST00000497597 KRTAP13-1Q8IUC0 172 aa6.16□□□□□ -1.42
TRAPPC12-223ENST00000497597 IGLV5-52A0A0A0MRZ9 124 aa6.14□□□□□ -1.43
TRAPPC12-223ENST00000497597 DNAH3Q8TD57 4116 aa6.12□□□□□ -1.43
TRAPPC12-223ENST00000497597 ALMS1Q8TCU4 4167 aa6.12□□□□□ -1.43
TRAPPC12-223ENST00000497597 DNAH7Q8WXX0 4024 aa6.11□□□□□ -1.43
TRAPPC12-223ENST00000497597 APLNQ9ULZ1 77 aa6.11□□□□□ -1.43
TRAPPC12-223ENST00000497597 LINC00483Q53H64 154 aa6.1□□□□□ -1.43
TRAPPC12-223ENST00000497597 IGLV7-43P04211 117 aa6.09□□□□□ -1.43
TRAPPC12-223ENST00000497597 A0A087WTM6 91 aa6.09□□□□□ -1.44
TRAPPC12-223ENST00000497597 K7ERS5 55 aa6.08□□□□□ -1.44
TRAPPC12-223ENST00000497597 HUWE1Q7Z6Z7 4374 aaKnown RBP6.08□□□□□ -1.44
TRAPPC12-223ENST00000497597 DNAH8Q96JB1 4490 aa6.08□□□□□ -1.44
TRAPPC12-223ENST00000497597 KRTAP13-3Q3SY46 172 aa6.08□□□□□ -1.44
TRAPPC12-223ENST00000497597 SPINT4Q6UDR6 99 aa6.08□□□□□ -1.44
TRAPPC12-223ENST00000497597 ROMO1P60602 79 aa6.05□□□□□ -1.44
TRAPPC12-223ENST00000497597 KRTAP25-1Q3LHN0 102 aa6.05□□□□□ -1.44
TRAPPC12-223ENST00000497597 DNHD1Q96M86 4753 aa6.04□□□□□ -1.44
TRAPPC12-223ENST00000497597 DNAH17Q9UFH2 4485 aa6.04□□□□□ -1.44
TRAPPC12-223ENST00000497597 A0A1B0GU33 70 aa6.03□□□□□ -1.44
TRAPPC12-223ENST00000497597 TYMSOSQ8TAI1 123 aa6.02□□□□□ -1.45
TRAPPC12-223ENST00000497597 A0A0D9SG42 100 aa6.02□□□□□ -1.45
TRAPPC12-223ENST00000497597 LINC00304Q8N9R0 145 aa6.02□□□□□ -1.45
TRAPPC12-223ENST00000497597 C9orf92A6NGG3 77 aa6□□□□□ -1.45
TRAPPC12-223ENST00000497597 A8MUU9 505 aa6□□□□□ -1.45
TRAPPC12-223ENST00000497597 Q6ZSA8 131 aa6□□□□□ -1.45
TRAPPC12-223ENST00000497597 H0YAA0 97 aa5.99□□□□□ -1.45
TRAPPC12-223ENST00000497597 LY6G6CO95867 125 aa5.99□□□□□ -1.45
TRAPPC12-223ENST00000497597 PLECQ15149 4684 aaKnown RBP5.98□□□□□ -1.45
TRAPPC12-223ENST00000497597 Q6ZRN7 208 aaPredicted RBP5.97□□□□□ -1.45
TRAPPC12-223ENST00000497597 NUPR2A6NF83 97 aa5.95□□□□□ -1.46
TRAPPC12-223ENST00000497597 P0C880 135 aa5.92□□□□□ -1.46
TRAPPC12-223ENST00000497597 KRTAP13-2Q52LG2 175 aa5.92□□□□□ -1.46
TRAPPC12-223ENST00000497597 H1FX-AS1Q4G0G2 97 aa5.9□□□□□ -1.46
TRAPPC12-223ENST00000497597 NDUFAF8A1L188 74 aa5.88□□□□□ -1.47
TRAPPC12-223ENST00000497597 KMT2AQ03164 3969 aa5.87□□□□□ -1.47
TRAPPC12-223ENST00000497597 KRTAP16-1A8MUX0 517 aa5.87□□□□□ -1.47
TRAPPC12-223ENST00000497597 C10orf95Q9H7T3 257 aa5.86□□□□□ -1.47
TRAPPC12-223ENST00000497597 KRTAP10-2P60368 255 aa5.84□□□□□ -1.47
TRAPPC12-223ENST00000497597 HECTD4Q9Y4D8 3996 aa5.83□□□□□ -1.48
TRAPPC12-223ENST00000497597 DNAH6Q9C0G6 4158 aa5.83□□□□□ -1.48
TRAPPC12-223ENST00000497597 DNAH11Q96DT5 4516 aa5.81□□□□□ -1.48
TRAPPC12-223ENST00000497597 COX6B2Q6YFQ2 88 aa5.8□□□□□ -1.48
TRAPPC12-223ENST00000497597 DNAH2Q9P225 4427 aa5.8□□□□□ -1.48
TRAPPC12-223ENST00000497597 STARD9Q9P2P6 4700 aa5.78□□□□□ -1.48
TRAPPC12-223ENST00000497597 PRKDCP78527 4128 aaKnown RBP5.78□□□□□ -1.48
TRAPPC12-223ENST00000497597 SMR3BP02814 79 aaPredicted RBP5.78□□□□□ -1.48
TRAPPC12-223ENST00000497597 VPS13DQ5THJ4 4388 aa5.78□□□□□ -1.48
TRAPPC12-223ENST00000497597 DYNC2H1Q8NCM8 4307 aaKnown RBP5.76□□□□□ -1.49
TRAPPC12-223ENST00000497597 RPL37P61927 97 aaKnown RBP5.75□□□□□ -1.49
TRAPPC12-223ENST00000497597 KRTAP10-1P60331 282 aa5.74□□□□□ -1.49
TRAPPC12-223ENST00000497597 LRP1BQ9NZR2 4599 aa5.73□□□□□ -1.49
TRAPPC12-223ENST00000497597 TPRXLQ17RH7 258 aa5.7□□□□□ -1.5
TRAPPC12-223ENST00000497597 KRTAP3-1Q9BYR8 98 aa5.69□□□□□ -1.5
TRAPPC12-223ENST00000497597 C20orf166-AS1Q96NR2 134 aa5.68□□□□□ -1.5
TRAPPC12-223ENST00000497597 KRTAP1-4P0C5Y4 121 aa5.68□□□□□ -1.5
TRAPPC12-223ENST00000497597 VPS13BQ7Z7G8 4022 aa5.63□□□□□ -1.51
TRAPPC12-223ENST00000497597 DNAH5Q8TE73 4624 aa5.6□□□□□ -1.51
TRAPPC12-223ENST00000497597 KRTAP13-4Q3LI77 160 aa5.6□□□□□ -1.51
TRAPPC12-223ENST00000497597 FAT2Q9NYQ8 4349 aa5.59□□□□□ -1.52
TRAPPC12-223ENST00000497597 A0A0A0MQY5 61 aa5.56□□□□□ -1.52
TRAPPC12-223ENST00000497597 S4R3F8 94 aa5.54□□□□□ -1.52
TRAPPC12-223ENST00000497597 MYCBP2O75592 4640 aa5.51□□□□□ -1.53
TRAPPC12-223ENST00000497597 KRTAP15-1Q3LI76 137 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms