RNA–Protein interactions for RNA: ENST00000497055.1

SGIP1-214, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 2

Gene SGIP1, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-214ENST00000497055 TIMM21Q9BVV7 248 aa1.98□□□□□ -2.09
SGIP1-214ENST00000497055 TRAV12-1A0A0B4J245 112 aa1.97□□□□□ -2.09
SGIP1-214ENST00000497055 A0A0G2JQZ4 141 aa1.97□□□□□ -2.09
SGIP1-214ENST00000497055 UBE2L5PA0A1B0GUS4 154 aa1.97□□□□□ -2.09
SGIP1-214ENST00000497055 ERC2-IT1O76042 136 aa1.97□□□□□ -2.09
SGIP1-214ENST00000497055 GNG4P50150 75 aa1.97□□□□□ -2.09
SGIP1-214ENST00000497055 SPANXN1Q5VSR9 72 aa1.97□□□□□ -2.09
SGIP1-214ENST00000497055 LINC01545Q5VT33 79 aa1.97□□□□□ -2.09
SGIP1-214ENST00000497055 C8orf59Q8N0T1 100 aaPredicted RBP1.97□□□□□ -2.09
SGIP1-214ENST00000497055 SMIM7Q9BQ49 75 aa1.97□□□□□ -2.09
SGIP1-214ENST00000497055 LIMD2Q9BT23 127 aa1.97□□□□□ -2.09
SGIP1-214ENST00000497055 SDHAF1A6NFY7 115 aa1.96□□□□□ -2.1
SGIP1-214ENST00000497055 CASC2Q6XLA1 102 aa1.96□□□□□ -2.1
SGIP1-214ENST00000497055 CDC42SE2Q9NRR3 84 aa1.96□□□□□ -2.1
SGIP1-214ENST00000497055 TMEM242Q9NWH2 141 aa1.96□□□□□ -2.1
SGIP1-214ENST00000497055 ARL2-SNX15V9GYD0 113 aa1.96□□□□□ -2.1
SGIP1-214ENST00000497055 A0A087WSZ3 146 aa1.95□□□□□ -2.1
SGIP1-214ENST00000497055 PIGBOS1A0A0B4J2F0 54 aa1.95□□□□□ -2.1
SGIP1-214ENST00000497055 S100A8P05109 93 aa1.95□□□□□ -2.1
SGIP1-214ENST00000497055 C9orf153Q5TBE3 101 aa1.95□□□□□ -2.1
SGIP1-214ENST00000497055 Q6ZUT4 128 aa1.95□□□□□ -2.1
SGIP1-214ENST00000497055 SMIM31A0A1B0GVY4 71 aa1.94□□□□□ -2.1
SGIP1-214ENST00000497055 CRIP1P50238 77 aa1.94□□□□□ -2.1
SGIP1-214ENST00000497055 PP632Q6XCG6 107 aa1.94□□□□□ -2.1
SGIP1-214ENST00000497055 GTF2H5Q6ZYL4 71 aa1.94□□□□□ -2.1
SGIP1-214ENST00000497055 CCDC179H3BU77 68 aa1.93□□□□□ -2.1
SGIP1-214ENST00000497055 Q1T7F1 81 aa1.93□□□□□ -2.1
SGIP1-214ENST00000497055 C5orf17Q8NAS9 161 aa1.93□□□□□ -2.1
SGIP1-214ENST00000497055 SPANXDQ9BXN6 97 aa1.93□□□□□ -2.1
SGIP1-214ENST00000497055 SEC11CQ9BY50 192 aa1.93□□□□□ -2.1
SGIP1-214ENST00000497055 MED9Q9NWA0 146 aa1.92□□□□□ -2.1
SGIP1-214ENST00000497055 ZFP30Q9Y2G7 519 aa1.92□□□□□ -2.1
SGIP1-214ENST00000497055 TMEM218A2RU14 115 aa1.91□□□□□ -2.1
SGIP1-214ENST00000497055 RBM3P98179 157 aaKnown RBP1.91□□□□□ -2.1
SGIP1-214ENST00000497055 MIR22HGQ0VDD5 57 aa1.91□□□□□ -2.1
SGIP1-214ENST00000497055 LCE1CQ5T751 118 aa1.91□□□□□ -2.1
SGIP1-214ENST00000497055 LCE1BQ5T7P3 118 aa1.91□□□□□ -2.1
SGIP1-214ENST00000497055 TEX261Q6UWH6 196 aa1.91□□□□□ -2.1
SGIP1-214ENST00000497055 P0C880 135 aa1.9□□□□□ -2.11
SGIP1-214ENST00000497055 KRTAP19-8Q3LI54 63 aa1.9□□□□□ -2.11
SGIP1-214ENST00000497055 MRPL54Q6P161 138 aaKnown RBP1.9□□□□□ -2.11
SGIP1-214ENST00000497055 SERP1Q9Y6X1 66 aa1.9□□□□□ -2.11
SGIP1-214ENST00000497055 SNCGO76070 127 aa1.89□□□□□ -2.11
SGIP1-214ENST00000497055 ADCYAP1P18509 176 aa1.89□□□□□ -2.11
SGIP1-214ENST00000497055 RPL39LQ96EH5 51 aaKnown RBP1.89□□□□□ -2.11
SGIP1-214ENST00000497055 OBSCN-AS1Q96MR7 158 aa1.89□□□□□ -2.11
SGIP1-214ENST00000497055 F8W1H4 67 aa1.88□□□□□ -2.11
SGIP1-214ENST00000497055 M0R143 59 aa1.88□□□□□ -2.11
SGIP1-214ENST00000497055 SVBPQ8N300 66 aa1.88□□□□□ -2.11
SGIP1-214ENST00000497055 ORMDL1Q9P0S3 153 aa1.88□□□□□ -2.11
SGIP1-214ENST00000497055 TOMM7Q9P0U1 55 aa1.88□□□□□ -2.11
SGIP1-214ENST00000497055 SCP2D1Q9UJQ7 156 aa1.88□□□□□ -2.11
SGIP1-214ENST00000497055 C7orf77A4D0Y5 90 aa1.87□□□□□ -2.11
SGIP1-214ENST00000497055 I3L3M4 83 aa1.87□□□□□ -2.11
SGIP1-214ENST00000497055 NDUFB6O95139 128 aa1.87□□□□□ -2.11
SGIP1-214ENST00000497055 SFT2D2O95562 160 aa1.87□□□□□ -2.11
SGIP1-214ENST00000497055 COX7CP15954 63 aa1.87□□□□□ -2.11
SGIP1-214ENST00000497055 HSD52Q0P140 79 aa1.87□□□□□ -2.11
SGIP1-214ENST00000497055 H3BRM9 83 aa1.86□□□□□ -2.11
SGIP1-214ENST00000497055 IFITM1P13164 125 aa1.85□□□□□ -2.11
SGIP1-214ENST00000497055 GNGT1P63211 74 aa1.85□□□□□ -2.11
SGIP1-214ENST00000497055 RPL7L1Q6DKI1 246 aaKnown RBP1.85□□□□□ -2.11
SGIP1-214ENST00000497055 F8VRH5 84 aa1.84□□□□□ -2.11
SGIP1-214ENST00000497055 SPINK8P0C7L1 97 aa1.84□□□□□ -2.11
SGIP1-214ENST00000497055 IL7P13232 177 aa1.84□□□□□ -2.11
SGIP1-214ENST00000497055 NPC2P61916 151 aa1.84□□□□□ -2.11
SGIP1-214ENST00000497055 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.84□□□□□ -2.11
SGIP1-214ENST00000497055 COA5Q86WW8 74 aa1.84□□□□□ -2.11
SGIP1-214ENST00000497055 PPDPFLQ8WWR9 84 aa1.84□□□□□ -2.11
SGIP1-214ENST00000497055 TRBV6-5A0A0K0K1A5 114 aa1.83□□□□□ -2.12
SGIP1-214ENST00000497055 IGKV4-1P06312 121 aa1.83□□□□□ -2.12
SGIP1-214ENST00000497055 UBE2G1P62253 170 aa1.83□□□□□ -2.12
SGIP1-214ENST00000497055 SSBP1Q04837 148 aaKnown RBP1.83□□□□□ -2.12
SGIP1-214ENST00000497055 TMEM141Q96I45 108 aa1.83□□□□□ -2.12
SGIP1-214ENST00000497055 Q96NJ1 140 aa1.83□□□□□ -2.12
SGIP1-214ENST00000497055 CDC42SE1Q9NRR8 79 aa1.83□□□□□ -2.12
SGIP1-214ENST00000497055 ETDCA0A1B0GVM5 59 aa1.82□□□□□ -2.12
SGIP1-214ENST00000497055 GCHFRP30047 84 aa1.82□□□□□ -2.12
SGIP1-214ENST00000497055 FCER1GP30273 86 aa1.82□□□□□ -2.12
SGIP1-214ENST00000497055 S100A7L2Q5SY68 101 aa1.82□□□□□ -2.12
SGIP1-214ENST00000497055 IGKCP01834 107 aa1.81□□□□□ -2.12
SGIP1-214ENST00000497055 LINC00299Q6ZSB3 139 aa1.81□□□□□ -2.12
SGIP1-214ENST00000497055 Q8IZM0 81 aa1.81□□□□□ -2.12
SGIP1-214ENST00000497055 SPRR2GQ9BYE4 73 aa1.81□□□□□ -2.12
SGIP1-214ENST00000497055 ST20Q9HBF5 79 aa1.81□□□□□ -2.12
SGIP1-214ENST00000497055 COL5A1-AS1Q5SY13 56 aa1.8□□□□□ -2.12
SGIP1-214ENST00000497055 KRTAP5-2Q701N4 177 aa1.8□□□□□ -2.12
SGIP1-214ENST00000497055 SMIM4Q8WVI0 70 aa1.8□□□□□ -2.12
SGIP1-214ENST00000497055 DNAL4O96015 105 aa1.79□□□□□ -2.12
SGIP1-214ENST00000497055 CSAG1Q6PB30 78 aa1.79□□□□□ -2.12
SGIP1-214ENST00000497055 ZNF625Q96I27 306 aaPredicted RBP1.79□□□□□ -2.12
SGIP1-214ENST00000497055 TMEM167BQ9NRX6 74 aa1.79□□□□□ -2.12
SGIP1-214ENST00000497055 JMJD7-PLA2G4BH0Y9G9 81 aa1.78□□□□□ -2.12
SGIP1-214ENST00000497055 RPL39P62891 51 aaKnown RBP1.78□□□□□ -2.12
SGIP1-214ENST00000497055 Q8N8P6 123 aa1.78□□□□□ -2.12
SGIP1-214ENST00000497055 DSCR8Q96T75 97 aa1.78□□□□□ -2.12
SGIP1-214ENST00000497055 Q9H521 79 aa1.78□□□□□ -2.12
SGIP1-214ENST00000497055 SNURFQ9Y675 71 aa1.78□□□□□ -2.12
SGIP1-214ENST00000497055 TRAV23DV6A0A075B6W5 121 aa1.77□□□□□ -2.13
SGIP1-214ENST00000497055 F2Z2F3 143 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms