RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 C10orf95Q9H7T3 257 aa0.77□□□□□ -2.29
ITGB1-214ENST00000488427 TRAV23DV6A0A075B6W5 121 aa0.76□□□□□ -2.29
ITGB1-214ENST00000488427 LINC00158P58513 81 aa0.76□□□□□ -2.29
ITGB1-214ENST00000488427 VBP1P61758 197 aa0.76□□□□□ -2.29
ITGB1-214ENST00000488427 KRTAP19-5Q3LI72 72 aa0.76□□□□□ -2.29
ITGB1-214ENST00000488427 COMMD7Q86VX2 200 aa0.76□□□□□ -2.29
ITGB1-214ENST00000488427 SMIM4Q8WVI0 70 aa0.76□□□□□ -2.29
ITGB1-214ENST00000488427 DSCR8Q96T75 97 aa0.76□□□□□ -2.29
ITGB1-214ENST00000488427 SIGMAR1Q99720 223 aa0.76□□□□□ -2.29
ITGB1-214ENST00000488427 TCEAL7Q9BRU2 100 aa0.76□□□□□ -2.29
ITGB1-214ENST00000488427 SMIM2Q9BVW6 85 aa0.76□□□□□ -2.29
ITGB1-214ENST00000488427 NXT2Q9NPJ8 142 aaKnown RBP0.76□□□□□ -2.29
ITGB1-214ENST00000488427 NHP2Q9NX24 153 aaKnown RBP0.76□□□□□ -2.29
ITGB1-214ENST00000488427 S4R3F8 94 aa0.76□□□□□ -2.29
ITGB1-214ENST00000488427 ZNF815PA8K554 130 aa0.75□□□□□ -2.29
ITGB1-214ENST00000488427 SPINK8P0C7L1 97 aa0.75□□□□□ -2.29
ITGB1-214ENST00000488427 C3orf79P0CE67 100 aa0.75□□□□□ -2.29
ITGB1-214ENST00000488427 FAUP35544 74 aaKnown RBP0.75□□□□□ -2.29
ITGB1-214ENST00000488427 Q5BKY6 102 aa0.75□□□□□ -2.29
ITGB1-214ENST00000488427 CLEC2BQ92478 149 aa0.75□□□□□ -2.29
ITGB1-214ENST00000488427 SS18L2Q9UHA2 77 aa0.75□□□□□ -2.29
ITGB1-214ENST00000488427 CCL20P78556 96 aa0.74□□□□□ -2.29
ITGB1-214ENST00000488427 S100A7L2Q5SY68 101 aa0.74□□□□□ -2.29
ITGB1-214ENST00000488427 CCDC160A6NGH7 325 aa0.73□□□□□ -2.29
ITGB1-214ENST00000488427 LYRM7Q5U5X0 104 aa0.73□□□□□ -2.29
ITGB1-214ENST00000488427 Q6JHZ5 121 aa0.73□□□□□ -2.29
ITGB1-214ENST00000488427 SCGB3A1Q96QR1 104 aa0.73□□□□□ -2.29
ITGB1-214ENST00000488427 C20orf78Q9BR46 151 aa0.73□□□□□ -2.29
ITGB1-214ENST00000488427 PSMG3Q9BT73 122 aaPredicted RBP0.73□□□□□ -2.29
ITGB1-214ENST00000488427 LOC110117498A0A087WWA1 95 aa0.72□□□□□ -2.29
ITGB1-214ENST00000488427 BORCS7-ASMTA0A0B4J1R7 106 aa0.72□□□□□ -2.29
ITGB1-214ENST00000488427 K7EQZ3 153 aa0.72□□□□□ -2.29
ITGB1-214ENST00000488427 SFTA2Q6UW10 78 aa0.72□□□□□ -2.29
ITGB1-214ENST00000488427 BORCS7Q96B45 105 aa0.72□□□□□ -2.29
ITGB1-214ENST00000488427 SMIM3Q9BZL3 60 aa0.72□□□□□ -2.29
ITGB1-214ENST00000488427 IGLV5-48A0A075B6I7 105 aa0.71□□□□□ -2.3
ITGB1-214ENST00000488427 H3BRM9 83 aa0.71□□□□□ -2.3
ITGB1-214ENST00000488427 NDUFB6O95139 128 aa0.71□□□□□ -2.3
ITGB1-214ENST00000488427 PMAIP1Q13794 54 aa0.71□□□□□ -2.3
ITGB1-214ENST00000488427 KRTAP21-1Q3LI58 79 aa0.71□□□□□ -2.3
ITGB1-214ENST00000488427 SFT2D1Q8WV19 159 aa0.71□□□□□ -2.3
ITGB1-214ENST00000488427 HSPB11Q9Y547 144 aa0.71□□□□□ -2.3
ITGB1-214ENST00000488427 CTXND1A0A1B0GTU2 59 aa0.7□□□□□ -2.3
ITGB1-214ENST00000488427 PFDN1O60925 122 aa0.7□□□□□ -2.3
ITGB1-214ENST00000488427 SMIM13P0DJ93 91 aa0.7□□□□□ -2.3
ITGB1-214ENST00000488427 HIST1H2BOP23527 126 aa0.7□□□□□ -2.3
ITGB1-214ENST00000488427 HIST1H2BBP33778 126 aa0.7□□□□□ -2.3
ITGB1-214ENST00000488427 HIST1H2BDP58876 126 aa0.7□□□□□ -2.3
ITGB1-214ENST00000488427 LSM3P62310 102 aaKnown RBP0.7□□□□□ -2.3
ITGB1-214ENST00000488427 HIST1H2BCP62807 126 aa0.7□□□□□ -2.3
ITGB1-214ENST00000488427 HIST2H2BEQ16778 126 aa0.7□□□□□ -2.3
ITGB1-214ENST00000488427 KRTAP6-1Q3LI64 71 aa0.7□□□□□ -2.3
ITGB1-214ENST00000488427 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.7□□□□□ -2.3
ITGB1-214ENST00000488427 HIST1H2BHQ93079 126 aa0.7□□□□□ -2.3
ITGB1-214ENST00000488427 HIST1H2BNQ99877 126 aa0.7□□□□□ -2.3
ITGB1-214ENST00000488427 HIST1H2BMQ99879 126 aa0.7□□□□□ -2.3
ITGB1-214ENST00000488427 BIN3Q9NQY0 253 aa0.7□□□□□ -2.3
ITGB1-214ENST00000488427 CYSLTR1Q9Y271 337 aa0.7□□□□□ -2.3
ITGB1-214ENST00000488427 A0A1B0GUT8 65 aa0.69□□□□□ -2.3
ITGB1-214ENST00000488427 COX7BP24311 80 aa0.69□□□□□ -2.3
ITGB1-214ENST00000488427 ELOF1P60002 83 aaKnown RBP0.69□□□□□ -2.3
ITGB1-214ENST00000488427 SERF2P84101 59 aa0.69□□□□□ -2.3
ITGB1-214ENST00000488427 MEIG1Q5JSS6 88 aa0.69□□□□□ -2.3
ITGB1-214ENST00000488427 RPL7L1Q6DKI1 246 aaKnown RBP0.69□□□□□ -2.3
ITGB1-214ENST00000488427 TRAV13-2A0A0B4J235 113 aa0.68□□□□□ -2.3
ITGB1-214ENST00000488427 MAP1LC3B2A6NCE7 125 aa0.68□□□□□ -2.3
ITGB1-214ENST00000488427 IGIPA6NJ69 53 aa0.68□□□□□ -2.3
ITGB1-214ENST00000488427 MT1AP04731 61 aa0.68□□□□□ -2.3
ITGB1-214ENST00000488427 CKS2P33552 79 aa0.68□□□□□ -2.3
ITGB1-214ENST00000488427 GNG4P50150 75 aa0.68□□□□□ -2.3
ITGB1-214ENST00000488427 LINC01554Q52M75 96 aa0.68□□□□□ -2.3
ITGB1-214ENST00000488427 TOMM5Q8N4H5 51 aa0.68□□□□□ -2.3
ITGB1-214ENST00000488427 MAP1LC3BQ9GZQ8 125 aa0.68□□□□□ -2.3
ITGB1-214ENST00000488427 BAALC-AS2P0C853 105 aa0.67□□□□□ -2.3
ITGB1-214ENST00000488427 GNGT1P63211 74 aa0.67□□□□□ -2.3
ITGB1-214ENST00000488427 TOMM6Q96B49 74 aa0.67□□□□□ -2.3
ITGB1-214ENST00000488427 M0QZ58 72 aa0.66□□□□□ -2.3
ITGB1-214ENST00000488427 CEBPGP53567 150 aa0.66□□□□□ -2.3
ITGB1-214ENST00000488427 OCIAD2Q56VL3 154 aa0.66□□□□□ -2.3
ITGB1-214ENST00000488427 A0A0D9SG42 100 aa0.65□□□□□ -2.31
ITGB1-214ENST00000488427 NAP1L6A6NFF2 107 aa0.65□□□□□ -2.31
ITGB1-214ENST00000488427 LINC00587B1AMM8 73 aa0.65□□□□□ -2.31
ITGB1-214ENST00000488427 NDUFC2O95298 119 aa0.65□□□□□ -2.31
ITGB1-214ENST00000488427 NEDD8Q15843 81 aa0.65□□□□□ -2.31
ITGB1-214ENST00000488427 RGS21Q2M5E4 152 aa0.65□□□□□ -2.31
ITGB1-214ENST00000488427 OR13C6PQ8NH95 151 aa0.65□□□□□ -2.31
ITGB1-214ENST00000488427 LINC00472Q9H8W2 130 aa0.65□□□□□ -2.31
ITGB1-214ENST00000488427 HIGD1CA8MV81 97 aa0.64□□□□□ -2.31
ITGB1-214ENST00000488427 RHEBQ15382 184 aa0.64□□□□□ -2.31
ITGB1-214ENST00000488427 AKR1C8PQ5T2L2 129 aa0.64□□□□□ -2.31
ITGB1-214ENST00000488427 Q6ZQT0 140 aa0.64□□□□□ -2.31
ITGB1-214ENST00000488427 TEN1Q86WV5 123 aa0.64□□□□□ -2.31
ITGB1-214ENST00000488427 A0A1W2PPM0 123 aa0.63□□□□□ -2.31
ITGB1-214ENST00000488427 H3BUT2 72 aa0.63□□□□□ -2.31
ITGB1-214ENST00000488427 IL7P13232 177 aa0.63□□□□□ -2.31
ITGB1-214ENST00000488427 G0S2P27469 103 aa0.63□□□□□ -2.31
ITGB1-214ENST00000488427 HIST3H2BBQ8N257 126 aa0.63□□□□□ -2.31
ITGB1-214ENST00000488427 KCNRGQ8N5I3 272 aa0.63□□□□□ -2.31
ITGB1-214ENST00000488427 ANKRD29Q8N6D5 301 aa0.63□□□□□ -2.31
ITGB1-214ENST00000488427 RAB37Q96AX2 223 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms