RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 A0A1B0GU69 56 aa6.94□□□□□ -1.3
SEC61A1-205ENST00000483956 ALMS1Q8TCU4 4167 aa6.94□□□□□ -1.3
SEC61A1-205ENST00000483956 MIR22HGQ0VDD5 57 aa6.93□□□□□ -1.3
SEC61A1-205ENST00000483956 ZNF706Q9Y5V0 76 aaPredicted RBP6.93□□□□□ -1.3
SEC61A1-205ENST00000483956 TGP01266 2768 aa6.92□□□□□ -1.3
SEC61A1-205ENST00000483956 DNAH9Q9NYC9 4486 aa6.92□□□□□ -1.3
SEC61A1-205ENST00000483956 C1orf134Q5TEV5 83 aa6.92□□□□□ -1.3
SEC61A1-205ENST00000483956 Q96NJ1 140 aa6.92□□□□□ -1.3
SEC61A1-205ENST00000483956 STAB2Q8WWQ8 2551 aa6.92□□□□□ -1.3
SEC61A1-205ENST00000483956 IGHV6-1A0A0B4J1U7 121 aa6.91□□□□□ -1.3
SEC61A1-205ENST00000483956 UBE2DNLQ8IWF7 75 aa6.9□□□□□ -1.3
SEC61A1-205ENST00000483956 ACYP2P14621 99 aa6.9□□□□□ -1.3
SEC61A1-205ENST00000483956 APLNQ9ULZ1 77 aa6.89□□□□□ -1.31
SEC61A1-205ENST00000483956 DYNC2H1Q8NCM8 4307 aaKnown RBP6.89□□□□□ -1.31
SEC61A1-205ENST00000483956 UQCR11O14957 56 aa6.88□□□□□ -1.31
SEC61A1-205ENST00000483956 LINC00483Q53H64 154 aa6.88□□□□□ -1.31
SEC61A1-205ENST00000483956 MRPL34Q9BQ48 92 aaKnown RBP6.87□□□□□ -1.31
SEC61A1-205ENST00000483956 NOTCH2NLQ7Z3S9 236 aa6.87□□□□□ -1.31
SEC61A1-205ENST00000483956 COL7A1Q02388 2944 aa6.86□□□□□ -1.31
SEC61A1-205ENST00000483956 PANO1I0J062 215 aa6.86□□□□□ -1.31
SEC61A1-205ENST00000483956 Q5W150 140 aa6.86□□□□□ -1.31
SEC61A1-205ENST00000483956 A0A1B0GVX0 72 aa6.85□□□□□ -1.31
SEC61A1-205ENST00000483956 ZNF861PO60384 105 aa6.85□□□□□ -1.31
SEC61A1-205ENST00000483956 IGLV9-49A0A0B4J1Y8 123 aa6.84□□□□□ -1.31
SEC61A1-205ENST00000483956 SPACA4Q8TDM5 124 aa6.84□□□□□ -1.32
SEC61A1-205ENST00000483956 Q6ZRN7 208 aaPredicted RBP6.83□□□□□ -1.32
SEC61A1-205ENST00000483956 DNAH7Q8WXX0 4024 aa6.82□□□□□ -1.32
SEC61A1-205ENST00000483956 NBDYA0A0U1RRE5 68 aa6.82□□□□□ -1.32
SEC61A1-205ENST00000483956 ROMO1P60602 79 aa6.82□□□□□ -1.32
SEC61A1-205ENST00000483956 DMAC1Q96GE9 116 aa6.81□□□□□ -1.32
SEC61A1-205ENST00000483956 WWC2-AS2Q96NR7 200 aa6.81□□□□□ -1.32
SEC61A1-205ENST00000483956 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.8□□□□□ -1.32
SEC61A1-205ENST00000483956 CDK2AP2O75956 126 aa6.79□□□□□ -1.32
SEC61A1-205ENST00000483956 KRTAP13-3Q3SY46 172 aa6.79□□□□□ -1.32
SEC61A1-205ENST00000483956 IGLV5-52A0A0A0MRZ9 124 aa6.75□□□□□ -1.33
SEC61A1-205ENST00000483956 HECTD4Q9Y4D8 3996 aa6.75□□□□□ -1.33
SEC61A1-205ENST00000483956 MEGF8Q7Z7M0 2845 aa6.75□□□□□ -1.33
SEC61A1-205ENST00000483956 PLECQ15149 4684 aaKnown RBP6.74□□□□□ -1.33
SEC61A1-205ENST00000483956 KRTAP25-1Q3LHN0 102 aa6.74□□□□□ -1.33
SEC61A1-205ENST00000483956 PSORS1C2Q9UIG4 136 aa6.74□□□□□ -1.33
SEC61A1-205ENST00000483956 NUPR2A6NF83 97 aa6.72□□□□□ -1.33
SEC61A1-205ENST00000483956 A0A087WTM6 91 aa6.71□□□□□ -1.34
SEC61A1-205ENST00000483956 SPINK6Q6UWN8 80 aa6.68□□□□□ -1.34
SEC61A1-205ENST00000483956 ANAPC11Q9NYG5 84 aa6.68□□□□□ -1.34
SEC61A1-205ENST00000483956 DNAH8Q96JB1 4490 aa6.68□□□□□ -1.34
SEC61A1-205ENST00000483956 IGLV7-43P04211 117 aa6.68□□□□□ -1.34
SEC61A1-205ENST00000483956 VPS13DQ5THJ4 4388 aa6.68□□□□□ -1.34
SEC61A1-205ENST00000483956 P0C880 135 aa6.68□□□□□ -1.34
SEC61A1-205ENST00000483956 FRAS1Q86XX4 4008 aa6.67□□□□□ -1.34
SEC61A1-205ENST00000483956 PRKDCP78527 4128 aaKnown RBP6.66□□□□□ -1.34
SEC61A1-205ENST00000483956 A8MUU9 505 aa6.65□□□□□ -1.35
SEC61A1-205ENST00000483956 LINC00304Q8N9R0 145 aa6.63□□□□□ -1.35
SEC61A1-205ENST00000483956 DNAH17Q9UFH2 4485 aa6.62□□□□□ -1.35
SEC61A1-205ENST00000483956 FLG2Q5D862 2391 aaPredicted RBP6.62□□□□□ -1.35
SEC61A1-205ENST00000483956 STARD9Q9P2P6 4700 aa6.61□□□□□ -1.35
SEC61A1-205ENST00000483956 CRIPTQ9P021 101 aa6.61□□□□□ -1.35
SEC61A1-205ENST00000483956 IGKV2-30P06310 120 aa6.6□□□□□ -1.35
SEC61A1-205ENST00000483956 SSBP3-AS1Q7Z2R9 100 aa6.6□□□□□ -1.35
SEC61A1-205ENST00000483956 CIRBP-AS1Q8TBR5 109 aa6.6□□□□□ -1.35
SEC61A1-205ENST00000483956 FAM229AH3BQW9 127 aa6.58□□□□□ -1.36
SEC61A1-205ENST00000483956 H0YAA0 97 aa6.58□□□□□ -1.36
SEC61A1-205ENST00000483956 SPINK1P00995 79 aa6.57□□□□□ -1.36
SEC61A1-205ENST00000483956 DNAH2Q9P225 4427 aa6.57□□□□□ -1.36
SEC61A1-205ENST00000483956 Q6ZSA8 131 aa6.54□□□□□ -1.36
SEC61A1-205ENST00000483956 KMT2AQ03164 3969 aa6.54□□□□□ -1.36
SEC61A1-205ENST00000483956 IGKV2D-30A0A075B6S6 120 aa6.53□□□□□ -1.36
SEC61A1-205ENST00000483956 LY6G6CO95867 125 aa6.51□□□□□ -1.37
SEC61A1-205ENST00000483956 KRTAP16-1A8MUX0 517 aa6.49□□□□□ -1.37
SEC61A1-205ENST00000483956 KRTAP13-2Q52LG2 175 aa6.47□□□□□ -1.37
SEC61A1-205ENST00000483956 DNAH11Q96DT5 4516 aa6.45□□□□□ -1.38
SEC61A1-205ENST00000483956 Q8N1X5 172 aa6.44□□□□□ -1.38
SEC61A1-205ENST00000483956 TYMSOSQ8TAI1 123 aa6.44□□□□□ -1.38
SEC61A1-205ENST00000483956 DNAH6Q9C0G6 4158 aa6.44□□□□□ -1.38
SEC61A1-205ENST00000483956 NDUFAF8A1L188 74 aa6.42□□□□□ -1.38
SEC61A1-205ENST00000483956 DNAH5Q8TE73 4624 aa6.42□□□□□ -1.38
SEC61A1-205ENST00000483956 A0A0A0MQY5 61 aa6.42□□□□□ -1.38
SEC61A1-205ENST00000483956 SPINT4Q6UDR6 99 aa6.42□□□□□ -1.38
SEC61A1-205ENST00000483956 A0A1B0GU33 70 aa6.41□□□□□ -1.38
SEC61A1-205ENST00000483956 KRTAP10-2P60368 255 aa6.39□□□□□ -1.39
SEC61A1-205ENST00000483956 KRTAP1-4P0C5Y4 121 aa6.38□□□□□ -1.39
SEC61A1-205ENST00000483956 C20orf166-AS1Q96NR2 134 aa6.36□□□□□ -1.39
SEC61A1-205ENST00000483956 H1FX-AS1Q4G0G2 97 aa6.36□□□□□ -1.39
SEC61A1-205ENST00000483956 K7ERS5 55 aa6.32□□□□□ -1.4
SEC61A1-205ENST00000483956 LRP1BQ9NZR2 4599 aa6.32□□□□□ -1.4
SEC61A1-205ENST00000483956 PKD1P98161 4303 aa6.32□□□□□ -1.4
SEC61A1-205ENST00000483956 KRTAP10-1P60331 282 aa6.31□□□□□ -1.4
SEC61A1-205ENST00000483956 TPRXLQ17RH7 258 aa6.3□□□□□ -1.4
SEC61A1-205ENST00000483956 KRTAP15-1Q3LI76 137 aa6.3□□□□□ -1.4
SEC61A1-205ENST00000483956 VPS13BQ7Z7G8 4022 aa6.29□□□□□ -1.4
SEC61A1-205ENST00000483956 HYDINQ4G0P3 5121 aa6.28□□□□□ -1.4
SEC61A1-205ENST00000483956 BIRC6Q9NR09 4857 aa6.26□□□□□ -1.41
SEC61A1-205ENST00000483956 RPS29P62273 56 aaKnown RBP6.26□□□□□ -1.41
SEC61A1-205ENST00000483956 FAT2Q9NYQ8 4349 aa6.25□□□□□ -1.41
SEC61A1-205ENST00000483956 C10orf95Q9H7T3 257 aa6.24□□□□□ -1.41
SEC61A1-205ENST00000483956 COX6B2Q6YFQ2 88 aa6.22□□□□□ -1.41
SEC61A1-205ENST00000483956 KRTAP17-1Q9BYP8 105 aa6.22□□□□□ -1.41
SEC61A1-205ENST00000483956 KMT2CQ8NEZ4 4911 aaKnown RBP6.19□□□□□ -1.42
SEC61A1-205ENST00000483956 RYR3Q15413 4870 aa6.18□□□□□ -1.42
SEC61A1-205ENST00000483956 KRTAP3-1Q9BYR8 98 aa6.17□□□□□ -1.42
SEC61A1-205ENST00000483956 DMBT1Q9UGM3 2413 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms