RNA–Protein interactions for RNA: ENST00000483690.1

MCF2-207, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

TSL 3

Gene MCF2, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-207ENST00000483690 TGP01266 2768 aa1.18□□□□□ -2.22
MCF2-207ENST00000483690 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.17□□□□□ -2.22
MCF2-207ENST00000483690 LCE6AA0A183 80 aa1.17□□□□□ -2.22
MCF2-207ENST00000483690 M0R135 149 aa1.17□□□□□ -2.22
MCF2-207ENST00000483690 CCL22O00626 93 aa1.17□□□□□ -2.22
MCF2-207ENST00000483690 STATHP02808 62 aa1.17□□□□□ -2.22
MCF2-207ENST00000483690 MGPP08493 103 aa1.17□□□□□ -2.22
MCF2-207ENST00000483690 DEFB110Q30KQ9 67 aa1.17□□□□□ -2.22
MCF2-207ENST00000483690 COX14Q96I36 57 aa1.17□□□□□ -2.22
MCF2-207ENST00000483690 SPRR4Q96PI1 79 aa1.17□□□□□ -2.22
MCF2-207ENST00000483690 USF3Q68DE3 2245 aa1.17□□□□□ -2.22
MCF2-207ENST00000483690 DYNC2H1Q8NCM8 4307 aaKnown RBP1.17□□□□□ -2.22
MCF2-207ENST00000483690 WNK1Q9H4A3 2382 aa1.16□□□□□ -2.22
MCF2-207ENST00000483690 NSD1Q96L73 2696 aaPredicted RBP1.16□□□□□ -2.22
MCF2-207ENST00000483690 M0R3E3 92 aa1.16□□□□□ -2.22
MCF2-207ENST00000483690 PIN1P1O15428 100 aa1.16□□□□□ -2.22
MCF2-207ENST00000483690 NREPQ16612 68 aa1.16□□□□□ -2.22
MCF2-207ENST00000483690 TMEM263Q8WUH6 116 aaKnown RBP1.16□□□□□ -2.22
MCF2-207ENST00000483690 WFDC6Q9BQY6 131 aa1.16□□□□□ -2.22
MCF2-207ENST00000483690 V9GYV3 84 aa1.16□□□□□ -2.22
MCF2-207ENST00000483690 DNAH9Q9NYC9 4486 aa1.16□□□□□ -2.22
MCF2-207ENST00000483690 MGAM2Q2M2H8 2515 aa1.16□□□□□ -2.22
MCF2-207ENST00000483690 CADP27708 2225 aa1.15□□□□□ -2.23
MCF2-207ENST00000483690 MXRA5Q9NR99 2828 aa1.15□□□□□ -2.23
MCF2-207ENST00000483690 A0A087WTM6 91 aa1.15□□□□□ -2.23
MCF2-207ENST00000483690 H0Y9P7 68 aa1.15□□□□□ -2.23
MCF2-207ENST00000483690 ABCA1O95477 2261 aa1.14□□□□□ -2.23
MCF2-207ENST00000483690 TRAV21A0A0B4J279 112 aa1.14□□□□□ -2.23
MCF2-207ENST00000483690 TRBV6-1A0A0K0K1D8 114 aa1.14□□□□□ -2.23
MCF2-207ENST00000483690 CTXND1A0A1B0GTU2 59 aa1.14□□□□□ -2.23
MCF2-207ENST00000483690 SMIM27A0A1W2PRY6 76 aa1.14□□□□□ -2.23
MCF2-207ENST00000483690 FCER1GP30273 86 aa1.14□□□□□ -2.23
MCF2-207ENST00000483690 SERF2P84101 59 aa1.14□□□□□ -2.23
MCF2-207ENST00000483690 TFF3Q07654 80 aa1.14□□□□□ -2.23
MCF2-207ENST00000483690 COX17Q14061 63 aa1.14□□□□□ -2.23
MCF2-207ENST00000483690 SACSQ9NZJ4 4579 aa1.13□□□□□ -2.23
MCF2-207ENST00000483690 TRAV1-2A0A0B4J238 106 aa1.13□□□□□ -2.23
MCF2-207ENST00000483690 H0YGG7 62 aa1.13□□□□□ -2.23
MCF2-207ENST00000483690 PLNP26678 52 aa1.13□□□□□ -2.23
MCF2-207ENST00000483690 SNRPGP62308 76 aaKnown RBP1.13□□□□□ -2.23
MCF2-207ENST00000483690 UBL5Q9BZL1 73 aa1.13□□□□□ -2.23
MCF2-207ENST00000483690 PLCE1Q9P212 2302 aa1.13□□□□□ -2.23
MCF2-207ENST00000483690 PLECQ15149 4684 aaKnown RBP1.13□□□□□ -2.23
MCF2-207ENST00000483690 DNAH1Q9P2D7 4330 aa1.13□□□□□ -2.23
MCF2-207ENST00000483690 FRAS1Q86XX4 4008 aa1.13□□□□□ -2.23
MCF2-207ENST00000483690 KMT2AQ03164 3969 aa1.13□□□□□ -2.23
MCF2-207ENST00000483690 DNAH10Q8IVF4 4471 aa1.13□□□□□ -2.23
MCF2-207ENST00000483690 HUWE1Q7Z6Z7 4374 aaKnown RBP1.12□□□□□ -2.23
MCF2-207ENST00000483690 DNAH6Q9C0G6 4158 aa1.12□□□□□ -2.23
MCF2-207ENST00000483690 LINC01546A6NGU7 62 aa1.12□□□□□ -2.23
MCF2-207ENST00000483690 RPL37P61927 97 aaKnown RBP1.12□□□□□ -2.23
MCF2-207ENST00000483690 C10orf113Q5VZT2 155 aa1.12□□□□□ -2.23
MCF2-207ENST00000483690 ENHOQ6UWT2 76 aa1.12□□□□□ -2.23
MCF2-207ENST00000483690 WFDC9Q8NEX5 89 aa1.12□□□□□ -2.23
MCF2-207ENST00000483690 Q96NJ1 140 aa1.12□□□□□ -2.23
MCF2-207ENST00000483690 LINC00472Q9H8W2 130 aa1.12□□□□□ -2.23
MCF2-207ENST00000483690 VWFP04275 2813 aa1.12□□□□□ -2.23
MCF2-207ENST00000483690 K7EMI3 77 aa1.11□□□□□ -2.23
MCF2-207ENST00000483690 DEFB114Q30KQ6 69 aa1.11□□□□□ -2.23
MCF2-207ENST00000483690 WNK2Q9Y3S1 2297 aa1.11□□□□□ -2.23
MCF2-207ENST00000483690 STARD9Q9P2P6 4700 aa1.11□□□□□ -2.23
MCF2-207ENST00000483690 CSMD3Q7Z407 3707 aa1.11□□□□□ -2.23
MCF2-207ENST00000483690 ALMS1Q8TCU4 4167 aa1.11□□□□□ -2.23
MCF2-207ENST00000483690 KMT2CQ8NEZ4 4911 aaKnown RBP1.11□□□□□ -2.23
MCF2-207ENST00000483690 BIRC6Q9NR09 4857 aa1.1□□□□□ -2.23
MCF2-207ENST00000483690 DNAH17Q9UFH2 4485 aa1.1□□□□□ -2.23
MCF2-207ENST00000483690 TRGV1A0A0A0MS02 117 aa1.1□□□□□ -2.23
MCF2-207ENST00000483690 IGIPA6NJ69 53 aa1.1□□□□□ -2.23
MCF2-207ENST00000483690 DEFB112Q30KQ8 113 aa1.1□□□□□ -2.23
MCF2-207ENST00000483690 RPS27LQ71UM5 84 aaKnown RBP1.1□□□□□ -2.23
MCF2-207ENST00000483690 GAFA1Q96PS6 74 aa1.1□□□□□ -2.23
MCF2-207ENST00000483690 RYR3Q15413 4870 aa1.1□□□□□ -2.23
MCF2-207ENST00000483690 LINC00959A0A1B0GUT2 108 aa1.09□□□□□ -2.23
MCF2-207ENST00000483690 I3L3M4 83 aa1.09□□□□□ -2.23
MCF2-207ENST00000483690 NDUFA4O00483 81 aa1.09□□□□□ -2.23
MCF2-207ENST00000483690 KCNQ1DNQ9H478 68 aa1.09□□□□□ -2.23
MCF2-207ENST00000483690 DNAH2Q9P225 4427 aa1.09□□□□□ -2.24
MCF2-207ENST00000483690 TENM2Q9NT68 2774 aa1.09□□□□□ -2.24
MCF2-207ENST00000483690 DEFB108AA8MXU0 73 aa1.08□□□□□ -2.24
MCF2-207ENST00000483690 M0R1W7 72 aa1.08□□□□□ -2.24
MCF2-207ENST00000483690 ACYP2P14621 99 aa1.08□□□□□ -2.24
MCF2-207ENST00000483690 HYDINQ4G0P3 5121 aa1.08□□□□□ -2.24
MCF2-207ENST00000483690 VPS13BQ7Z7G8 4022 aa1.08□□□□□ -2.24
MCF2-207ENST00000483690 DNAH11Q96DT5 4516 aa1.08□□□□□ -2.24
MCF2-207ENST00000483690 EPPK1P58107 5090 aaKnown RBP1.08□□□□□ -2.24
MCF2-207ENST00000483690 RYR1P21817 5038 aa1.07□□□□□ -2.24
MCF2-207ENST00000483690 A0A1B0GU69 56 aa1.07□□□□□ -2.24
MCF2-207ENST00000483690 COX7BP24311 80 aa1.07□□□□□ -2.24
MCF2-207ENST00000483690 VPS13DQ5THJ4 4388 aa1.07□□□□□ -2.24
MCF2-207ENST00000483690 RYR2Q92736 4967 aa1.07□□□□□ -2.24
MCF2-207ENST00000483690 PCLOQ9Y6V0 5065 aa1.07□□□□□ -2.24
MCF2-207ENST00000483690 UBR4Q5T4S7 5183 aa1.06□□□□□ -2.24
MCF2-207ENST00000483690 TNCP24821 2201 aa1.06□□□□□ -2.24
MCF2-207ENST00000483690 A0A096LNT2 108 aa1.06□□□□□ -2.24
MCF2-207ENST00000483690 ETDCA0A1B0GVM5 59 aa1.06□□□□□ -2.24
MCF2-207ENST00000483690 LYNX1G3V0Z9 82 aa1.06□□□□□ -2.24
MCF2-207ENST00000483690 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.06□□□□□ -2.24
MCF2-207ENST00000483690 PKHD1P08F94 4074 aa1.06□□□□□ -2.24
MCF2-207ENST00000483690 DYNC1H1Q14204 4646 aaKnown RBP1.06□□□□□ -2.24
MCF2-207ENST00000483690 COL7A1Q02388 2944 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 173.9 ms