RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 PPDPFLQ8WWR9 84 aa2.99□□□□□ -1.93
CSDE1-207ENST00000483407 C20orf166-AS1Q96NR2 134 aa2.99□□□□□ -1.93
CSDE1-207ENST00000483407 SNHG12Q9BXW3 62 aa2.99□□□□□ -1.93
CSDE1-207ENST00000483407 SS18L2Q9UHA2 77 aa2.99□□□□□ -1.93
CSDE1-207ENST00000483407 FAM236DA0A1B0GTK5 79 aa2.97□□□□□ -1.93
CSDE1-207ENST00000483407 A8MUU9 505 aa2.97□□□□□ -1.93
CSDE1-207ENST00000483407 H3BUT2 72 aa2.97□□□□□ -1.93
CSDE1-207ENST00000483407 FAM236CP0DP71 79 aa2.97□□□□□ -1.93
CSDE1-207ENST00000483407 COA6Q5JTJ3 125 aaKnown RBP2.97□□□□□ -1.93
CSDE1-207ENST00000483407 BVES-AS1Q5T3Y7 98 aa2.97□□□□□ -1.93
CSDE1-207ENST00000483407 SNCGO76070 127 aa2.96□□□□□ -1.94
CSDE1-207ENST00000483407 TEN1Q86WV5 123 aa2.96□□□□□ -1.94
CSDE1-207ENST00000483407 C12orf57Q99622 126 aa2.96□□□□□ -1.94
CSDE1-207ENST00000483407 HSBP1L1C9JCN9 74 aa2.95□□□□□ -1.94
CSDE1-207ENST00000483407 RBM12B-AS1Q9P1G2 102 aa2.95□□□□□ -1.94
CSDE1-207ENST00000483407 A0A087WSZ3 146 aa2.94□□□□□ -1.94
CSDE1-207ENST00000483407 MT2AP02795 61 aa2.94□□□□□ -1.94
CSDE1-207ENST00000483407 KRTAP10-10P60014 251 aa2.93□□□□□ -1.94
CSDE1-207ENST00000483407 SIGMAR1Q99720 223 aa2.93□□□□□ -1.94
CSDE1-207ENST00000483407 LINC00846Q9NV44 126 aa2.93□□□□□ -1.94
CSDE1-207ENST00000483407 MT1FP04733 61 aa2.92□□□□□ -1.94
CSDE1-207ENST00000483407 LINC00313P59037 77 aa2.92□□□□□ -1.94
CSDE1-207ENST00000483407 H0YGX0 51 aa2.91□□□□□ -1.94
CSDE1-207ENST00000483407 H3BMG7 143 aa2.91□□□□□ -1.94
CSDE1-207ENST00000483407 RAB37Q96AX2 223 aa2.91□□□□□ -1.94
CSDE1-207ENST00000483407 MUC12Q9UKN1 5478 aa2.91□□□□□ -1.94
CSDE1-207ENST00000483407 IGKV4-1P06312 121 aa2.9□□□□□ -1.95
CSDE1-207ENST00000483407 FABP2P12104 132 aa2.9□□□□□ -1.95
CSDE1-207ENST00000483407 S100A2P29034 98 aa2.9□□□□□ -1.95
CSDE1-207ENST00000483407 KRTAP20-1Q3LI63 56 aa2.9□□□□□ -1.95
CSDE1-207ENST00000483407 HRES1P13985 223 aa2.89□□□□□ -1.95
CSDE1-207ENST00000483407 LCE3CQ5T5A8 94 aa2.89□□□□□ -1.95
CSDE1-207ENST00000483407 A0A0B4J2C4 111 aa2.88□□□□□ -1.95
CSDE1-207ENST00000483407 A0A1B0GX51 115 aa2.88□□□□□ -1.95
CSDE1-207ENST00000483407 A0A1W2PNM2 257 aa2.88□□□□□ -1.95
CSDE1-207ENST00000483407 ANKRD29Q8N6D5 301 aa2.88□□□□□ -1.95
CSDE1-207ENST00000483407 HIST1H2BLQ99880 126 aa2.88□□□□□ -1.95
CSDE1-207ENST00000483407 IGHV6-1A0A0B4J1U7 121 aa2.87□□□□□ -1.95
CSDE1-207ENST00000483407 TRBV7-4A0A0J9YYF1 115 aa2.87□□□□□ -1.95
CSDE1-207ENST00000483407 COX8AP10176 69 aa2.87□□□□□ -1.95
CSDE1-207ENST00000483407 KRTAP6-3Q3LI67 103 aa2.87□□□□□ -1.95
CSDE1-207ENST00000483407 HIST3H2BBQ8N257 126 aa2.87□□□□□ -1.95
CSDE1-207ENST00000483407 A8MU10 97 aa2.86□□□□□ -1.95
CSDE1-207ENST00000483407 H3BQ85 93 aa2.86□□□□□ -1.95
CSDE1-207ENST00000483407 DLEU1O43261 78 aa2.86□□□□□ -1.95
CSDE1-207ENST00000483407 DNAL4O96015 105 aa2.86□□□□□ -1.95
CSDE1-207ENST00000483407 KMT2DO14686 5537 aa2.85□□□□□ -1.95
CSDE1-207ENST00000483407 C8orf87E5RJ46 101 aa2.85□□□□□ -1.95
CSDE1-207ENST00000483407 TRACP01848 142 aa2.85□□□□□ -1.95
CSDE1-207ENST00000483407 S100A6P06703 90 aa2.85□□□□□ -1.95
CSDE1-207ENST00000483407 DEFB116Q30KQ4 102 aa2.85□□□□□ -1.95
CSDE1-207ENST00000483407 KRTAP19-6Q3LI70 58 aa2.85□□□□□ -1.95
CSDE1-207ENST00000483407 CAMK2N1Q7Z7J9 78 aa2.85□□□□□ -1.95
CSDE1-207ENST00000483407 LINC00472Q9H8W2 130 aa2.85□□□□□ -1.95
CSDE1-207ENST00000483407 ORMDL1Q9P0S3 153 aa2.85□□□□□ -1.95
CSDE1-207ENST00000483407 A0A1B0GV72 72 aa2.84□□□□□ -1.95
CSDE1-207ENST00000483407 A8MWP4 228 aa2.84□□□□□ -1.95
CSDE1-207ENST00000483407 CCKP06307 115 aa2.84□□□□□ -1.95
CSDE1-207ENST00000483407 SPINK7P58062 85 aa2.84□□□□□ -1.95
CSDE1-207ENST00000483407 HIGD1BQ9P298 99 aa2.84□□□□□ -1.95
CSDE1-207ENST00000483407 PRO1854Q9UHT4 67 aa2.84□□□□□ -1.95
CSDE1-207ENST00000483407 A0A1B0GVX0 72 aa2.83□□□□□ -1.96
CSDE1-207ENST00000483407 TMEM256-PLSCR3K7ERE1 68 aa2.83□□□□□ -1.96
CSDE1-207ENST00000483407 ZCCHC13Q8WW36 166 aaKnown RBP2.83□□□□□ -1.96
CSDE1-207ENST00000483407 C14orf144Q96I85 54 aa2.83□□□□□ -1.96
CSDE1-207ENST00000483407 J3KT08 172 aa2.81□□□□□ -1.96
CSDE1-207ENST00000483407 COX6CP09669 75 aa2.81□□□□□ -1.96
CSDE1-207ENST00000483407 PSMB2P49721 201 aa2.81□□□□□ -1.96
CSDE1-207ENST00000483407 KRTAP10-5P60370 271 aa2.81□□□□□ -1.96
CSDE1-207ENST00000483407 SPATA45Q537H7 98 aa2.81□□□□□ -1.96
CSDE1-207ENST00000483407 LYRM7Q5U5X0 104 aa2.81□□□□□ -1.96
CSDE1-207ENST00000483407 VPS25Q9BRG1 176 aa2.81□□□□□ -1.96
CSDE1-207ENST00000483407 OBSCNQ5VST9 7968 aa2.8□□□□□ -1.96
CSDE1-207ENST00000483407 NDUFB1O75438 58 aa2.8□□□□□ -1.96
CSDE1-207ENST00000483407 S100A1P23297 94 aa2.8□□□□□ -1.96
CSDE1-207ENST00000483407 C2orf91Q6ZV80 131 aa2.8□□□□□ -1.96
CSDE1-207ENST00000483407 WFDC13Q8IUB5 93 aa2.8□□□□□ -1.96
CSDE1-207ENST00000483407 GPR98Q8WXG9 6306 aa2.8□□□□□ -1.96
CSDE1-207ENST00000483407 FXYD2P54710 66 aa2.79□□□□□ -1.96
CSDE1-207ENST00000483407 RBM3P98179 157 aaKnown RBP2.79□□□□□ -1.96
CSDE1-207ENST00000483407 DSCR8Q96T75 97 aa2.79□□□□□ -1.96
CSDE1-207ENST00000483407 VAMP8Q9BV40 100 aa2.79□□□□□ -1.96
CSDE1-207ENST00000483407 KRTAP9-6A8MVA2 160 aa2.78□□□□□ -1.96
CSDE1-207ENST00000483407 KRTAP4-3Q9BYR4 195 aa2.77□□□□□ -1.97
CSDE1-207ENST00000483407 C9JAW5 83 aa2.76□□□□□ -1.97
CSDE1-207ENST00000483407 HSD52Q0P140 79 aa2.76□□□□□ -1.97
CSDE1-207ENST00000483407 C8orf17Q9NRJ1 99 aa2.76□□□□□ -1.97
CSDE1-207ENST00000483407 IGKV3D-7A0A0C4DH55 119 aa2.75□□□□□ -1.97
CSDE1-207ENST00000483407 K7ERJ3 54 aa2.75□□□□□ -1.97
CSDE1-207ENST00000483407 SCGB1C2P0DMR2 95 aa2.75□□□□□ -1.97
CSDE1-207ENST00000483407 H1FX-AS1Q4G0G2 97 aa2.75□□□□□ -1.97
CSDE1-207ENST00000483407 Q6ZQT0 140 aa2.75□□□□□ -1.97
CSDE1-207ENST00000483407 KRTAP5-2Q701N4 177 aa2.75□□□□□ -1.97
CSDE1-207ENST00000483407 MDN1Q9NU22 5596 aa2.73□□□□□ -1.97
CSDE1-207ENST00000483407 A0A1B0GW54 56 aa2.73□□□□□ -1.97
CSDE1-207ENST00000483407 BAALC-AS2P0C853 105 aa2.73□□□□□ -1.97
CSDE1-207ENST00000483407 JMJD7-PLA2G4BH0Y9G9 81 aa2.72□□□□□ -1.97
CSDE1-207ENST00000483407 PRR15Q8IV56 129 aa2.71□□□□□ -1.98
CSDE1-207ENST00000483407 TMEM254Q8TBM7 123 aa2.71□□□□□ -1.98
CSDE1-207ENST00000483407 MRPL34Q9BQ48 92 aaKnown RBP2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms