RNA–Protein interactions for RNA: ENST00000482843.5

RAPGEF3-210, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,395 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-210ENST00000482843 NDUFB1O75438 58 aa7.35□□□□□ -1.23
RAPGEF3-210ENST00000482843 SPAG11AQ6PDA7 123 aa7.34□□□□□ -1.23
RAPGEF3-210ENST00000482843 FBN3Q75N90 2809 aa7.34□□□□□ -1.23
RAPGEF3-210ENST00000482843 DNAH7Q8WXX0 4024 aa7.33□□□□□ -1.24
RAPGEF3-210ENST00000482843 Q6ZR54 194 aa7.33□□□□□ -1.24
RAPGEF3-210ENST00000482843 CIRBP-AS1Q8TBR5 109 aa7.33□□□□□ -1.24
RAPGEF3-210ENST00000482843 PRKDCP78527 4128 aaKnown RBP7.3□□□□□ -1.24
RAPGEF3-210ENST00000482843 DNHD1Q96M86 4753 aa7.28□□□□□ -1.24
RAPGEF3-210ENST00000482843 SEC61BP60468 96 aaKnown RBP7.28□□□□□ -1.24
RAPGEF3-210ENST00000482843 IGLV8-61A0A075B6I0 122 aa7.27□□□□□ -1.25
RAPGEF3-210ENST00000482843 A8MWP4 228 aa7.26□□□□□ -1.25
RAPGEF3-210ENST00000482843 ZNF861PO60384 105 aa7.26□□□□□ -1.25
RAPGEF3-210ENST00000482843 H0Y9P7 68 aa7.26□□□□□ -1.25
RAPGEF3-210ENST00000482843 STARD9Q9P2P6 4700 aa7.25□□□□□ -1.25
RAPGEF3-210ENST00000482843 SPRR1BP22528 89 aa7.25□□□□□ -1.25
RAPGEF3-210ENST00000482843 LUZP6Q538Z0 58 aa7.25□□□□□ -1.25
RAPGEF3-210ENST00000482843 KRTAP10-2P60368 255 aa7.24□□□□□ -1.25
RAPGEF3-210ENST00000482843 DNAH1Q9P2D7 4330 aa7.24□□□□□ -1.25
RAPGEF3-210ENST00000482843 PCOTHQ58A44 107 aa7.23□□□□□ -1.25
RAPGEF3-210ENST00000482843 LINC00472Q9H8W2 130 aa7.23□□□□□ -1.25
RAPGEF3-210ENST00000482843 KRTAP13-1Q8IUC0 172 aa7.22□□□□□ -1.25
RAPGEF3-210ENST00000482843 PLAC8Q9NZF1 115 aa7.21□□□□□ -1.26
RAPGEF3-210ENST00000482843 NDUFAF8A1L188 74 aa7.2□□□□□ -1.26
RAPGEF3-210ENST00000482843 IGLV7-43P04211 117 aa7.2□□□□□ -1.26
RAPGEF3-210ENST00000482843 KMT2AQ03164 3969 aa7.2□□□□□ -1.26
RAPGEF3-210ENST00000482843 WWC2-AS2Q96NR7 200 aa7.2□□□□□ -1.26
RAPGEF3-210ENST00000482843 P0C880 135 aa7.19□□□□□ -1.26
RAPGEF3-210ENST00000482843 COA5Q86WW8 74 aa7.17□□□□□ -1.26
RAPGEF3-210ENST00000482843 C8orf17Q9NRJ1 99 aa7.16□□□□□ -1.26
RAPGEF3-210ENST00000482843 MMP24-AS1A0A0U1RRL7 71 aa7.15□□□□□ -1.27
RAPGEF3-210ENST00000482843 KRTAP29-1A8MX34 341 aaPredicted RBP7.14□□□□□ -1.27
RAPGEF3-210ENST00000482843 KRTAP10-1P60331 282 aa7.13□□□□□ -1.27
RAPGEF3-210ENST00000482843 A0A087X002 238 aa7.12□□□□□ -1.27
RAPGEF3-210ENST00000482843 NOTCH2NLQ7Z3S9 236 aa7.12□□□□□ -1.27
RAPGEF3-210ENST00000482843 A0A1B0GVX0 72 aa7.12□□□□□ -1.27
RAPGEF3-210ENST00000482843 ZCCHC13Q8WW36 166 aaKnown RBP7.11□□□□□ -1.27
RAPGEF3-210ENST00000482843 LINC00483Q53H64 154 aa7.11□□□□□ -1.27
RAPGEF3-210ENST00000482843 LINC01558Q9Y6Z2 57 aa7.09□□□□□ -1.27
RAPGEF3-210ENST00000482843 SMR3BP02814 79 aaPredicted RBP7.09□□□□□ -1.27
RAPGEF3-210ENST00000482843 ASB16-AS1Q495Z4 193 aa7.09□□□□□ -1.27
RAPGEF3-210ENST00000482843 Q96NJ1 140 aa7.09□□□□□ -1.27
RAPGEF3-210ENST00000482843 VPS13DQ5THJ4 4388 aa7.09□□□□□ -1.28
RAPGEF3-210ENST00000482843 MRPL34Q9BQ48 92 aaKnown RBP7.08□□□□□ -1.28
RAPGEF3-210ENST00000482843 LCE6AA0A183 80 aa7.06□□□□□ -1.28
RAPGEF3-210ENST00000482843 FRAS1Q86XX4 4008 aa7.06□□□□□ -1.28
RAPGEF3-210ENST00000482843 K7ERS5 55 aa7.05□□□□□ -1.28
RAPGEF3-210ENST00000482843 C20orf166-AS1Q96NR2 134 aa7.04□□□□□ -1.28
RAPGEF3-210ENST00000482843 DNAH2Q9P225 4427 aa7.04□□□□□ -1.28
RAPGEF3-210ENST00000482843 TP53AIP1Q9HCN2 124 aa7.03□□□□□ -1.28
RAPGEF3-210ENST00000482843 SSBP3-AS1Q7Z2R9 100 aa7.02□□□□□ -1.29
RAPGEF3-210ENST00000482843 SPINT4Q6UDR6 99 aa7.02□□□□□ -1.29
RAPGEF3-210ENST00000482843 DNAH11Q96DT5 4516 aa7.02□□□□□ -1.29
RAPGEF3-210ENST00000482843 FLG2Q5D862 2391 aaPredicted RBP7.01□□□□□ -1.29
RAPGEF3-210ENST00000482843 DYNC2H1Q8NCM8 4307 aaKnown RBP7.01□□□□□ -1.29
RAPGEF3-210ENST00000482843 H3BPC8 53 aa7□□□□□ -1.29
RAPGEF3-210ENST00000482843 TYMSOSQ8TAI1 123 aa7□□□□□ -1.29
RAPGEF3-210ENST00000482843 DNAH6Q9C0G6 4158 aa6.98□□□□□ -1.29
RAPGEF3-210ENST00000482843 HECTD4Q9Y4D8 3996 aa6.98□□□□□ -1.29
RAPGEF3-210ENST00000482843 FAM229AH3BQW9 127 aa6.97□□□□□ -1.29
RAPGEF3-210ENST00000482843 KRTAP13-2Q52LG2 175 aa6.97□□□□□ -1.29
RAPGEF3-210ENST00000482843 DNAH8Q96JB1 4490 aa6.96□□□□□ -1.3
RAPGEF3-210ENST00000482843 SPANXA2-OT1Q8N9U9 137 aa6.96□□□□□ -1.3
RAPGEF3-210ENST00000482843 DNAH17Q9UFH2 4485 aa6.96□□□□□ -1.3
RAPGEF3-210ENST00000482843 KRTAP25-1Q3LHN0 102 aa6.95□□□□□ -1.3
RAPGEF3-210ENST00000482843 Q5W150 140 aa6.95□□□□□ -1.3
RAPGEF3-210ENST00000482843 CRIPTQ9P021 101 aa6.95□□□□□ -1.3
RAPGEF3-210ENST00000482843 IGKV2D-30A0A075B6S6 120 aa6.94□□□□□ -1.3
RAPGEF3-210ENST00000482843 IGKV2-30P06310 120 aa6.94□□□□□ -1.3
RAPGEF3-210ENST00000482843 A8MUU9 505 aa6.9□□□□□ -1.3
RAPGEF3-210ENST00000482843 IGLV7-46A0A075B6I9 117 aa6.89□□□□□ -1.31
RAPGEF3-210ENST00000482843 Q6ZSA8 131 aa6.89□□□□□ -1.31
RAPGEF3-210ENST00000482843 LRP1BQ9NZR2 4599 aa6.89□□□□□ -1.31
RAPGEF3-210ENST00000482843 HYDINQ4G0P3 5121 aa6.89□□□□□ -1.31
RAPGEF3-210ENST00000482843 DMBT1Q9UGM3 2413 aaPredicted RBP6.87□□□□□ -1.31
RAPGEF3-210ENST00000482843 A0A1B0GU69 56 aa6.87□□□□□ -1.31
RAPGEF3-210ENST00000482843 C9orf92A6NGG3 77 aa6.85□□□□□ -1.31
RAPGEF3-210ENST00000482843 KRTAP1-4P0C5Y4 121 aa6.85□□□□□ -1.31
RAPGEF3-210ENST00000482843 LINC00304Q8N9R0 145 aa6.85□□□□□ -1.31
RAPGEF3-210ENST00000482843 HRES1P13985 223 aa6.83□□□□□ -1.32
RAPGEF3-210ENST00000482843 DNAH5Q8TE73 4624 aa6.82□□□□□ -1.32
RAPGEF3-210ENST00000482843 SPINK1P00995 79 aa6.82□□□□□ -1.32
RAPGEF3-210ENST00000482843 SPATA8Q6RVD6 105 aa6.79□□□□□ -1.32
RAPGEF3-210ENST00000482843 UQCR11O14957 56 aa6.78□□□□□ -1.32
RAPGEF3-210ENST00000482843 ACYP2P14621 99 aa6.78□□□□□ -1.32
RAPGEF3-210ENST00000482843 PKHD1P08F94 4074 aa6.76□□□□□ -1.33
RAPGEF3-210ENST00000482843 VPS13BQ7Z7G8 4022 aa6.76□□□□□ -1.33
RAPGEF3-210ENST00000482843 Q8N1X5 172 aa6.74□□□□□ -1.33
RAPGEF3-210ENST00000482843 FAT1Q14517 4588 aa6.73□□□□□ -1.33
RAPGEF3-210ENST00000482843 ALMS1Q8TCU4 4167 aa6.72□□□□□ -1.33
RAPGEF3-210ENST00000482843 KRTAP21-3Q3LHN1 58 aa6.71□□□□□ -1.34
RAPGEF3-210ENST00000482843 DMAC1Q96GE9 116 aa6.7□□□□□ -1.34
RAPGEF3-210ENST00000482843 KRTAP13-3Q3SY46 172 aa6.68□□□□□ -1.34
RAPGEF3-210ENST00000482843 FAT2Q9NYQ8 4349 aa6.68□□□□□ -1.34
RAPGEF3-210ENST00000482843 PKD1P98161 4303 aa6.65□□□□□ -1.35
RAPGEF3-210ENST00000482843 DYNC1H1Q14204 4646 aaKnown RBP6.63□□□□□ -1.35
RAPGEF3-210ENST00000482843 SACSQ9NZJ4 4579 aa6.63□□□□□ -1.35
RAPGEF3-210ENST00000482843 A0A1B0GVY2 172 aa6.59□□□□□ -1.35
RAPGEF3-210ENST00000482843 Q5VSD8 79 aa6.56□□□□□ -1.36
RAPGEF3-210ENST00000482843 KMT2CQ8NEZ4 4911 aaKnown RBP6.55□□□□□ -1.36
RAPGEF3-210ENST00000482843 KRTAP15-1Q3LI76 137 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms