RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 PRCDQ00LT1 54 aa3.67□□□□□ -1.82
LSM5-210ENST00000480956 ATXN8Q156A1 80 aa3.67□□□□□ -1.82
LSM5-210ENST00000480956 TMEM167BQ9NRX6 74 aa3.67□□□□□ -1.82
LSM5-210ENST00000480956 SPINK4O60575 86 aa3.66□□□□□ -1.82
LSM5-210ENST00000480956 PCOTHQ58A44 107 aa3.66□□□□□ -1.82
LSM5-210ENST00000480956 TENM1Q9UKZ4 2725 aa3.65□□□□□ -1.82
LSM5-210ENST00000480956 KRTAP9-6A8MVA2 160 aa3.65□□□□□ -1.82
LSM5-210ENST00000480956 KRTAP12-2P59991 146 aa3.64□□□□□ -1.83
LSM5-210ENST00000480956 SPINK13Q1W4C9 94 aa3.64□□□□□ -1.83
LSM5-210ENST00000480956 LCE3EQ5T5B0 92 aa3.64□□□□□ -1.83
LSM5-210ENST00000480956 C2CD3Q4AC94 2353 aa3.64□□□□□ -1.83
LSM5-210ENST00000480956 GVQW2A0A096LPI5 108 aaPredicted RBP3.64□□□□□ -1.83
LSM5-210ENST00000480956 DEFB136Q30KP8 78 aa3.64□□□□□ -1.83
LSM5-210ENST00000480956 WNK1Q9H4A3 2382 aa3.63□□□□□ -1.83
LSM5-210ENST00000480956 ATRQ13535 2644 aa3.62□□□□□ -1.83
LSM5-210ENST00000480956 K7EIM0 57 aa3.62□□□□□ -1.83
LSM5-210ENST00000480956 I3L2K1 104 aa3.61□□□□□ -1.83
LSM5-210ENST00000480956 FBN1P35555 2871 aaKnown RBP3.61□□□□□ -1.83
LSM5-210ENST00000480956 TRAV21A0A0B4J279 112 aa3.61□□□□□ -1.83
LSM5-210ENST00000480956 TRBV6-1A0A0K0K1D8 114 aa3.61□□□□□ -1.83
LSM5-210ENST00000480956 HAMPP81172 84 aa3.61□□□□□ -1.83
LSM5-210ENST00000480956 LY6G6CO95867 125 aa3.6□□□□□ -1.83
LSM5-210ENST00000480956 VWFP04275 2813 aa3.6□□□□□ -1.83
LSM5-210ENST00000480956 STAB1Q9NY15 2570 aa3.59□□□□□ -1.83
LSM5-210ENST00000480956 LINC01546A6NGU7 62 aa3.59□□□□□ -1.83
LSM5-210ENST00000480956 TRRAPQ9Y4A5 3859 aa3.59□□□□□ -1.84
LSM5-210ENST00000480956 KRTAP13-3Q3SY46 172 aa3.58□□□□□ -1.84
LSM5-210ENST00000480956 WFDC9Q8NEX5 89 aa3.58□□□□□ -1.84
LSM5-210ENST00000480956 A0A1B0GU69 56 aa3.57□□□□□ -1.84
LSM5-210ENST00000480956 COL6A5A8TX70 2615 aa3.56□□□□□ -1.84
LSM5-210ENST00000480956 DEFB1P60022 68 aa3.56□□□□□ -1.84
LSM5-210ENST00000480956 NREPQ16612 68 aa3.56□□□□□ -1.84
LSM5-210ENST00000480956 H3BUA1 57 aa3.55□□□□□ -1.84
LSM5-210ENST00000480956 RPL37P61927 97 aaKnown RBP3.55□□□□□ -1.84
LSM5-210ENST00000480956 USMG5Q96IX5 58 aa3.55□□□□□ -1.84
LSM5-210ENST00000480956 PKD1L1Q8TDX9 2849 aa3.54□□□□□ -1.84
LSM5-210ENST00000480956 KRTAP12-1P59990 96 aa3.54□□□□□ -1.84
LSM5-210ENST00000480956 CMYA5Q8N3K9 4069 aa3.53□□□□□ -1.84
LSM5-210ENST00000480956 RHPN1-AS1Q9BWJ2 59 aa3.53□□□□□ -1.84
LSM5-210ENST00000480956 DNHD1Q96M86 4753 aa3.53□□□□□ -1.84
LSM5-210ENST00000480956 NDUFA4O00483 81 aa3.53□□□□□ -1.85
LSM5-210ENST00000480956 CRIP1P50238 77 aa3.53□□□□□ -1.85
LSM5-210ENST00000480956 ANK2Q01484 3957 aa3.53□□□□□ -1.85
LSM5-210ENST00000480956 SORL1Q92673 2214 aa3.52□□□□□ -1.85
LSM5-210ENST00000480956 FCER1GP30273 86 aa3.52□□□□□ -1.85
LSM5-210ENST00000480956 KLK9Q2XQG4 91 aa3.52□□□□□ -1.85
LSM5-210ENST00000480956 CNFNQ9BYD5 112 aa3.52□□□□□ -1.85
LSM5-210ENST00000480956 K7EMI3 77 aa3.5□□□□□ -1.85
LSM5-210ENST00000480956 TIMM8BQ9Y5J9 83 aaPredicted RBP3.5□□□□□ -1.85
LSM5-210ENST00000480956 SSBP3-AS1Q7Z2R9 100 aa3.5□□□□□ -1.85
LSM5-210ENST00000480956 NOTCH1P46531 2555 aa3.49□□□□□ -1.85
LSM5-210ENST00000480956 PLNP26678 52 aa3.48□□□□□ -1.85
LSM5-210ENST00000480956 DEFB131AP59861 70 aa3.48□□□□□ -1.85
LSM5-210ENST00000480956 DEFB114Q30KQ6 69 aa3.48□□□□□ -1.85
LSM5-210ENST00000480956 LINC00959A0A1B0GUT2 108 aa3.47□□□□□ -1.85
LSM5-210ENST00000480956 LINC01549A6NIU2 74 aa3.47□□□□□ -1.85
LSM5-210ENST00000480956 NBEAL1Q6ZS30 2694 aa3.46□□□□□ -1.86
LSM5-210ENST00000480956 KRTAP10-10P60014 251 aa3.46□□□□□ -1.86
LSM5-210ENST00000480956 MGAM2Q2M2H8 2515 aa3.45□□□□□ -1.86
LSM5-210ENST00000480956 LCE6AA0A183 80 aa3.45□□□□□ -1.86
LSM5-210ENST00000480956 HTN1P15515 57 aa3.45□□□□□ -1.86
LSM5-210ENST00000480956 NBEAL2Q6ZNJ1 2754 aa3.45□□□□□ -1.86
LSM5-210ENST00000480956 SMIM2Q9BVW6 85 aa3.43□□□□□ -1.86
LSM5-210ENST00000480956 DNAH3Q8TD57 4116 aa3.43□□□□□ -1.86
LSM5-210ENST00000480956 UBE2DNLQ8IWF7 75 aa3.42□□□□□ -1.86
LSM5-210ENST00000480956 TENM3Q9P273 2699 aa3.41□□□□□ -1.86
LSM5-210ENST00000480956 DEFB4AO15263 64 aa3.41□□□□□ -1.86
LSM5-210ENST00000480956 COX7BP24311 80 aa3.41□□□□□ -1.86
LSM5-210ENST00000480956 DEFB135Q30KP9 77 aa3.41□□□□□ -1.86
LSM5-210ENST00000480956 KRTAP5-1Q6L8H4 278 aa3.4□□□□□ -1.87
LSM5-210ENST00000480956 MEGF8Q7Z7M0 2845 aa3.39□□□□□ -1.87
LSM5-210ENST00000480956 IGIPA6NJ69 53 aa3.39□□□□□ -1.87
LSM5-210ENST00000480956 ENHOQ6UWT2 76 aa3.39□□□□□ -1.87
LSM5-210ENST00000480956 COL7A1Q02388 2944 aa3.38□□□□□ -1.87
LSM5-210ENST00000480956 PRKDCP78527 4128 aaKnown RBP3.38□□□□□ -1.87
LSM5-210ENST00000480956 K7EIL1 84 aa3.38□□□□□ -1.87
LSM5-210ENST00000480956 DEFB104AQ8WTQ1 72 aa3.38□□□□□ -1.87
LSM5-210ENST00000480956 FLG2Q5D862 2391 aaPredicted RBP3.37□□□□□ -1.87
LSM5-210ENST00000480956 HUWE1Q7Z6Z7 4374 aaKnown RBP3.37□□□□□ -1.87
LSM5-210ENST00000480956 KRTAP6-3Q3LI67 103 aa3.37□□□□□ -1.87
LSM5-210ENST00000480956 RPL39LQ96EH5 51 aaKnown RBP3.36□□□□□ -1.87
LSM5-210ENST00000480956 DNAH9Q9NYC9 4486 aa3.36□□□□□ -1.87
LSM5-210ENST00000480956 A8MTW9 85 aa3.36□□□□□ -1.87
LSM5-210ENST00000480956 DEFB130BP0DP73 79 aa3.36□□□□□ -1.87
LSM5-210ENST00000480956 DEFB130AP0DP74 79 aa3.36□□□□□ -1.87
LSM5-210ENST00000480956 POLR2KP53803 58 aaKnown RBP3.36□□□□□ -1.87
LSM5-210ENST00000480956 NOP10Q9NPE3 64 aaKnown RBP3.36□□□□□ -1.87
LSM5-210ENST00000480956 HTN3P15516 51 aa3.35□□□□□ -1.87
LSM5-210ENST00000480956 UBL5Q9BZL1 73 aa3.35□□□□□ -1.87
LSM5-210ENST00000480956 RPL39P62891 51 aaKnown RBP3.33□□□□□ -1.88
LSM5-210ENST00000480956 LYSTQ99698 3801 aa3.33□□□□□ -1.88
LSM5-210ENST00000480956 TGP01266 2768 aa3.33□□□□□ -1.88
LSM5-210ENST00000480956 STAB2Q8WWQ8 2551 aa3.32□□□□□ -1.88
LSM5-210ENST00000480956 A0A096LPF7 62 aa3.32□□□□□ -1.88
LSM5-210ENST00000480956 I3L3M4 83 aa3.32□□□□□ -1.88
LSM5-210ENST00000480956 FBN3Q75N90 2809 aa3.31□□□□□ -1.88
LSM5-210ENST00000480956 CSMD3Q7Z407 3707 aa3.31□□□□□ -1.88
LSM5-210ENST00000480956 STARD9Q9P2P6 4700 aa3.3□□□□□ -1.88
LSM5-210ENST00000480956 LCE3DQ9BYE3 92 aa3.3□□□□□ -1.88
LSM5-210ENST00000480956 KRTAP21-3Q3LHN1 58 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms