RNA–Protein interactions for RNA: ENST00000479866.5

RAPGEF3-209, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,917 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-209ENST00000479866 SPRR1AP35321 89 aa7.07□□□□□ -1.28
RAPGEF3-209ENST00000479866 A0A1B0GU69 56 aa7.07□□□□□ -1.28
RAPGEF3-209ENST00000479866 PLA2G1BP04054 148 aaKnown RBP7.06□□□□□ -1.28
RAPGEF3-209ENST00000479866 LCE6AA0A183 80 aa7.06□□□□□ -1.28
RAPGEF3-209ENST00000479866 ZNF861PO60384 105 aa7.06□□□□□ -1.28
RAPGEF3-209ENST00000479866 Q8NBF4 154 aa7.04□□□□□ -1.28
RAPGEF3-209ENST00000479866 IGFL1Q6UW32 110 aa7.04□□□□□ -1.28
RAPGEF3-209ENST00000479866 SRRM2Q9UQ35 2752 aaKnown RBP7.03□□□□□ -1.28
RAPGEF3-209ENST00000479866 ROMO1P60602 79 aa7.03□□□□□ -1.28
RAPGEF3-209ENST00000479866 PLECQ15149 4684 aaKnown RBP7.03□□□□□ -1.28
RAPGEF3-209ENST00000479866 KRTAP4-16G5E9R7 235 aaPredicted RBP7.03□□□□□ -1.28
RAPGEF3-209ENST00000479866 SSBP3-AS1Q7Z2R9 100 aa7.03□□□□□ -1.28
RAPGEF3-209ENST00000479866 PLAC8Q9NZF1 115 aa7.03□□□□□ -1.28
RAPGEF3-209ENST00000479866 IGLV7-43P04211 117 aa7.02□□□□□ -1.29
RAPGEF3-209ENST00000479866 A0A1W2PNM2 257 aa7.01□□□□□ -1.29
RAPGEF3-209ENST00000479866 LINC01558Q9Y6Z2 57 aa7.01□□□□□ -1.29
RAPGEF3-209ENST00000479866 CRIPTQ9P021 101 aa7.01□□□□□ -1.29
RAPGEF3-209ENST00000479866 K7ERS5 55 aa7□□□□□ -1.29
RAPGEF3-209ENST00000479866 SPRR4Q96PI1 79 aa6.99□□□□□ -1.29
RAPGEF3-209ENST00000479866 RPL37AP61513 92 aaKnown RBP6.99□□□□□ -1.29
RAPGEF3-209ENST00000479866 IGLV5-48A0A075B6I7 105 aa6.98□□□□□ -1.29
RAPGEF3-209ENST00000479866 NDUFAF8A1L188 74 aa6.97□□□□□ -1.29
RAPGEF3-209ENST00000479866 DNAH3Q8TD57 4116 aa6.97□□□□□ -1.29
RAPGEF3-209ENST00000479866 LUZP6Q538Z0 58 aa6.96□□□□□ -1.29
RAPGEF3-209ENST00000479866 SPANXA2-OT1Q8N9U9 137 aa6.96□□□□□ -1.29
RAPGEF3-209ENST00000479866 STARD9Q9P2P6 4700 aa6.96□□□□□ -1.3
RAPGEF3-209ENST00000479866 DNAH10Q8IVF4 4471 aa6.96□□□□□ -1.3
RAPGEF3-209ENST00000479866 A8MWP4 228 aa6.95□□□□□ -1.3
RAPGEF3-209ENST00000479866 UQCR11O14957 56 aa6.95□□□□□ -1.3
RAPGEF3-209ENST00000479866 LYSTQ99698 3801 aa6.95□□□□□ -1.3
RAPGEF3-209ENST00000479866 DMBT1Q9UGM3 2413 aaPredicted RBP6.94□□□□□ -1.3
RAPGEF3-209ENST00000479866 ZCCHC13Q8WW36 166 aaKnown RBP6.93□□□□□ -1.3
RAPGEF3-209ENST00000479866 TYMSOSQ8TAI1 123 aa6.92□□□□□ -1.3
RAPGEF3-209ENST00000479866 FAM229AH3BQW9 127 aa6.9□□□□□ -1.3
RAPGEF3-209ENST00000479866 H3BPC8 53 aa6.88□□□□□ -1.31
RAPGEF3-209ENST00000479866 DSCR10P59022 87 aa6.85□□□□□ -1.31
RAPGEF3-209ENST00000479866 IGLV7-46A0A075B6I9 117 aa6.83□□□□□ -1.32
RAPGEF3-209ENST00000479866 SPINK1P00995 79 aa6.82□□□□□ -1.32
RAPGEF3-209ENST00000479866 SPRR1BP22528 89 aa6.82□□□□□ -1.32
RAPGEF3-209ENST00000479866 KMT2AQ03164 3969 aa6.82□□□□□ -1.32
RAPGEF3-209ENST00000479866 A0A1B0GW54 56 aa6.82□□□□□ -1.32
RAPGEF3-209ENST00000479866 KRTAP13-1Q8IUC0 172 aa6.82□□□□□ -1.32
RAPGEF3-209ENST00000479866 A0A087X002 238 aa6.81□□□□□ -1.32
RAPGEF3-209ENST00000479866 HRES1P13985 223 aa6.8□□□□□ -1.32
RAPGEF3-209ENST00000479866 ASB16-AS1Q495Z4 193 aa6.8□□□□□ -1.32
RAPGEF3-209ENST00000479866 DNAH7Q8WXX0 4024 aa6.8□□□□□ -1.32
RAPGEF3-209ENST00000479866 ACYP2P14621 99 aa6.79□□□□□ -1.32
RAPGEF3-209ENST00000479866 DNAH1Q9P2D7 4330 aa6.79□□□□□ -1.32
RAPGEF3-209ENST00000479866 KRTAP25-1Q3LHN0 102 aa6.76□□□□□ -1.33
RAPGEF3-209ENST00000479866 LINC00304Q8N9R0 145 aa6.76□□□□□ -1.33
RAPGEF3-209ENST00000479866 Q6ZSA8 131 aa6.76□□□□□ -1.33
RAPGEF3-209ENST00000479866 VPS13DQ5THJ4 4388 aa6.76□□□□□ -1.33
RAPGEF3-209ENST00000479866 C8orf17Q9NRJ1 99 aa6.75□□□□□ -1.33
RAPGEF3-209ENST00000479866 LINC00483Q53H64 154 aa6.73□□□□□ -1.33
RAPGEF3-209ENST00000479866 C20orf166-AS1Q96NR2 134 aa6.73□□□□□ -1.33
RAPGEF3-209ENST00000479866 Q5VSD8 79 aa6.72□□□□□ -1.33
RAPGEF3-209ENST00000479866 J3QL48 77 aa6.72□□□□□ -1.33
RAPGEF3-209ENST00000479866 SEC61BP60468 96 aaKnown RBP6.7□□□□□ -1.34
RAPGEF3-209ENST00000479866 DNAH11Q96DT5 4516 aa6.7□□□□□ -1.34
RAPGEF3-209ENST00000479866 LINC00472Q9H8W2 130 aa6.69□□□□□ -1.34
RAPGEF3-209ENST00000479866 A0A1B0GVX0 72 aa6.69□□□□□ -1.34
RAPGEF3-209ENST00000479866 C9orf92A6NGG3 77 aa6.69□□□□□ -1.34
RAPGEF3-209ENST00000479866 A8MUU9 505 aa6.69□□□□□ -1.34
RAPGEF3-209ENST00000479866 KRTAP13-2Q52LG2 175 aa6.69□□□□□ -1.34
RAPGEF3-209ENST00000479866 SPATA8Q6RVD6 105 aa6.67□□□□□ -1.34
RAPGEF3-209ENST00000479866 Q96NJ1 140 aa6.67□□□□□ -1.34
RAPGEF3-209ENST00000479866 P0C880 135 aa6.65□□□□□ -1.34
RAPGEF3-209ENST00000479866 DMAC1Q96GE9 116 aa6.64□□□□□ -1.35
RAPGEF3-209ENST00000479866 MRPL34Q9BQ48 92 aaKnown RBP6.64□□□□□ -1.35
RAPGEF3-209ENST00000479866 A0A1B0GVY2 172 aa6.64□□□□□ -1.35
RAPGEF3-209ENST00000479866 TP53AIP1Q9HCN2 124 aa6.63□□□□□ -1.35
RAPGEF3-209ENST00000479866 IGKV2D-30A0A075B6S6 120 aa6.62□□□□□ -1.35
RAPGEF3-209ENST00000479866 IGKV2-30P06310 120 aa6.62□□□□□ -1.35
RAPGEF3-209ENST00000479866 HYDINQ4G0P3 5121 aa6.62□□□□□ -1.35
RAPGEF3-209ENST00000479866 NOTCH2NLQ7Z3S9 236 aa6.61□□□□□ -1.35
RAPGEF3-209ENST00000479866 DNAH2Q9P225 4427 aa6.61□□□□□ -1.35
RAPGEF3-209ENST00000479866 KRTAP1-4P0C5Y4 121 aa6.6□□□□□ -1.35
RAPGEF3-209ENST00000479866 MMP24-AS1A0A0U1RRL7 71 aa6.59□□□□□ -1.35
RAPGEF3-209ENST00000479866 DYNC2H1Q8NCM8 4307 aaKnown RBP6.58□□□□□ -1.36
RAPGEF3-209ENST00000479866 DNAH5Q8TE73 4624 aa6.57□□□□□ -1.36
RAPGEF3-209ENST00000479866 DNAH17Q9UFH2 4485 aa6.55□□□□□ -1.36
RAPGEF3-209ENST00000479866 ALMS1Q8TCU4 4167 aa6.52□□□□□ -1.37
RAPGEF3-209ENST00000479866 DNAH6Q9C0G6 4158 aa6.52□□□□□ -1.37
RAPGEF3-209ENST00000479866 SACSQ9NZJ4 4579 aa6.52□□□□□ -1.37
RAPGEF3-209ENST00000479866 FAT1Q14517 4588 aa6.52□□□□□ -1.37
RAPGEF3-209ENST00000479866 KMT2CQ8NEZ4 4911 aaKnown RBP6.51□□□□□ -1.37
RAPGEF3-209ENST00000479866 LRP1BQ9NZR2 4599 aa6.5□□□□□ -1.37
RAPGEF3-209ENST00000479866 DYNC1H1Q14204 4646 aaKnown RBP6.48□□□□□ -1.37
RAPGEF3-209ENST00000479866 KRTAP29-1A8MX34 341 aaPredicted RBP6.48□□□□□ -1.37
RAPGEF3-209ENST00000479866 Q8N1X5 172 aa6.46□□□□□ -1.38
RAPGEF3-209ENST00000479866 HECTD4Q9Y4D8 3996 aa6.44□□□□□ -1.38
RAPGEF3-209ENST00000479866 PKHD1P08F94 4074 aa6.44□□□□□ -1.38
RAPGEF3-209ENST00000479866 FRAS1Q86XX4 4008 aa6.42□□□□□ -1.38
RAPGEF3-209ENST00000479866 Q5W150 140 aa6.41□□□□□ -1.38
RAPGEF3-209ENST00000479866 DNAH8Q96JB1 4490 aa6.4□□□□□ -1.38
RAPGEF3-209ENST00000479866 RYR2Q92736 4967 aa6.38□□□□□ -1.39
RAPGEF3-209ENST00000479866 KIAA1109Q2LD37 5005 aa6.37□□□□□ -1.39
RAPGEF3-209ENST00000479866 A0A0D9SG42 100 aa6.34□□□□□ -1.39
RAPGEF3-209ENST00000479866 A0A1B0GU33 70 aa6.34□□□□□ -1.39
RAPGEF3-209ENST00000479866 FAT2Q9NYQ8 4349 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms