RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 TMEM258P61165 79 aa1.82□□□□□ -2.12
CDC42BPA-212ENST00000478573 RPL37AP61513 92 aaKnown RBP1.82□□□□□ -2.12
CDC42BPA-212ENST00000478573 HIST1H4AP62805 103 aaKnown RBP1.82□□□□□ -2.12
CDC42BPA-212ENST00000478573 SS18Q15532 418 aa1.82□□□□□ -2.12
CDC42BPA-212ENST00000478573 C4orf26Q17RF5 130 aa1.82□□□□□ -2.12
CDC42BPA-212ENST00000478573 MUSTN1Q8IVN3 82 aa1.82□□□□□ -2.12
CDC42BPA-212ENST00000478573 SMIM20Q8N5G0 67 aa1.82□□□□□ -2.12
CDC42BPA-212ENST00000478573 CDC42SE2Q9NRR3 84 aa1.82□□□□□ -2.12
CDC42BPA-212ENST00000478573 PLAC8Q9NZF1 115 aa1.82□□□□□ -2.12
CDC42BPA-212ENST00000478573 LINC00474Q9P2X8 69 aa1.82□□□□□ -2.12
CDC42BPA-212ENST00000478573 NDUFA12Q9UI09 145 aa1.82□□□□□ -2.12
CDC42BPA-212ENST00000478573 UBE2D4Q9Y2X8 147 aa1.82□□□□□ -2.12
CDC42BPA-212ENST00000478573 SRRM2Q9UQ35 2752 aaKnown RBP1.81□□□□□ -2.12
CDC42BPA-212ENST00000478573 PCLOQ9Y6V0 5065 aa1.81□□□□□ -2.12
CDC42BPA-212ENST00000478573 ABCA13Q86UQ4 5058 aa1.81□□□□□ -2.12
CDC42BPA-212ENST00000478573 TEX49A0A1B0GTD5 131 aa1.81□□□□□ -2.12
CDC42BPA-212ENST00000478573 J3KT08 172 aa1.81□□□□□ -2.12
CDC42BPA-212ENST00000478573 SMR3BP02814 79 aaPredicted RBP1.81□□□□□ -2.12
CDC42BPA-212ENST00000478573 COX7CP15954 63 aa1.81□□□□□ -2.12
CDC42BPA-212ENST00000478573 TSPEAR-AS2P59090 65 aa1.81□□□□□ -2.12
CDC42BPA-212ENST00000478573 HAMPP81172 84 aa1.81□□□□□ -2.12
CDC42BPA-212ENST00000478573 MEIG1Q5JSS6 88 aa1.81□□□□□ -2.12
CDC42BPA-212ENST00000478573 Q6JHZ5 121 aa1.81□□□□□ -2.12
CDC42BPA-212ENST00000478573 ZCCHC13Q8WW36 166 aaKnown RBP1.81□□□□□ -2.12
CDC42BPA-212ENST00000478573 OBSCN-AS1Q96MR7 158 aa1.81□□□□□ -2.12
CDC42BPA-212ENST00000478573 FAT3Q8TDW7 4589 aa1.81□□□□□ -2.12
CDC42BPA-212ENST00000478573 MYCBP2O75592 4640 aa1.81□□□□□ -2.12
CDC42BPA-212ENST00000478573 A0A096LNI7 61 aa1.8□□□□□ -2.12
CDC42BPA-212ENST00000478573 IGKV3OR2-268A0A0C4DH90 116 aa1.8□□□□□ -2.12
CDC42BPA-212ENST00000478573 LOC107984640A0A0U1RRK4 108 aa1.8□□□□□ -2.12
CDC42BPA-212ENST00000478573 JMJD7-PLA2G4BH0Y9G9 81 aa1.8□□□□□ -2.12
CDC42BPA-212ENST00000478573 NDUFC2O95298 119 aa1.8□□□□□ -2.12
CDC42BPA-212ENST00000478573 PDE6GP18545 87 aa1.8□□□□□ -2.12
CDC42BPA-212ENST00000478573 XCL1P47992 114 aa1.8□□□□□ -2.12
CDC42BPA-212ENST00000478573 KRTAP12-4P60329 112 aa1.8□□□□□ -2.12
CDC42BPA-212ENST00000478573 RPL39P62891 51 aaKnown RBP1.8□□□□□ -2.12
CDC42BPA-212ENST00000478573 SPAG11BQ08648 103 aa1.8□□□□□ -2.12
CDC42BPA-212ENST00000478573 KRTAP6-3Q3LI67 103 aa1.8□□□□□ -2.12
CDC42BPA-212ENST00000478573 OR13C6PQ8NH95 151 aa1.8□□□□□ -2.12
CDC42BPA-212ENST00000478573 LINC00308Q8TCZ7 52 aa1.8□□□□□ -2.12
CDC42BPA-212ENST00000478573 ZNF625Q96I27 306 aaPredicted RBP1.8□□□□□ -2.12
CDC42BPA-212ENST00000478573 C20orf166-AS1Q96NR2 134 aa1.8□□□□□ -2.12
CDC42BPA-212ENST00000478573 FAT1Q14517 4588 aa1.79□□□□□ -2.12
CDC42BPA-212ENST00000478573 A0A1B0GW54 56 aa1.79□□□□□ -2.12
CDC42BPA-212ENST00000478573 CCDC179H3BU77 68 aa1.79□□□□□ -2.12
CDC42BPA-212ENST00000478573 ZNF73O43830 326 aaPredicted RBP1.79□□□□□ -2.12
CDC42BPA-212ENST00000478573 BAALC-AS2P0C853 105 aa1.79□□□□□ -2.12
CDC42BPA-212ENST00000478573 ATP5EP56381 51 aaPredicted RBP1.79□□□□□ -2.12
CDC42BPA-212ENST00000478573 COX17Q14061 63 aa1.79□□□□□ -2.12
CDC42BPA-212ENST00000478573 C9orf153Q5TBE3 101 aa1.79□□□□□ -2.12
CDC42BPA-212ENST00000478573 FAM19A5Q7Z5A7 132 aaPredicted RBP1.79□□□□□ -2.12
CDC42BPA-212ENST00000478573 SERP2Q8N6R1 65 aa1.79□□□□□ -2.12
CDC42BPA-212ENST00000478573 SS18L2Q9UHA2 77 aa1.79□□□□□ -2.12
CDC42BPA-212ENST00000478573 TRAV13-1A0A0B4J241 112 aa1.78□□□□□ -2.12
CDC42BPA-212ENST00000478573 FAM236AA0A1B0GUQ0 79 aa1.78□□□□□ -2.12
CDC42BPA-212ENST00000478573 FAM236BA0A1B0GV22 79 aa1.78□□□□□ -2.12
CDC42BPA-212ENST00000478573 hADV29S1A0JD25 119 aa1.78□□□□□ -2.12
CDC42BPA-212ENST00000478573 TMEM256-PLSCR3K7ERE1 68 aa1.78□□□□□ -2.12
CDC42BPA-212ENST00000478573 NDUFC1O43677 76 aa1.78□□□□□ -2.12
CDC42BPA-212ENST00000478573 ERC2-IT1O76042 136 aa1.78□□□□□ -2.12
CDC42BPA-212ENST00000478573 DNAL4O96015 105 aa1.78□□□□□ -2.12
CDC42BPA-212ENST00000478573 LINC00313P59037 77 aa1.78□□□□□ -2.12
CDC42BPA-212ENST00000478573 COX6A2Q02221 97 aa1.78□□□□□ -2.12
CDC42BPA-212ENST00000478573 Q8IZM0 81 aa1.78□□□□□ -2.12
CDC42BPA-212ENST00000478573 TNXBP22105 4242 aa1.77□□□□□ -2.13
CDC42BPA-212ENST00000478573 CCKP06307 115 aa1.77□□□□□ -2.13
CDC42BPA-212ENST00000478573 KRTAP12-3P60328 96 aa1.77□□□□□ -2.13
CDC42BPA-212ENST00000478573 SPINK6Q6UWN8 80 aa1.77□□□□□ -2.13
CDC42BPA-212ENST00000478573 C6orf48Q9UBA6 75 aa1.77□□□□□ -2.13
CDC42BPA-212ENST00000478573 CDKN2A-AS1Q9UH64 79 aa1.77□□□□□ -2.13
CDC42BPA-212ENST00000478573 TRAV7A0A075B6U4 112 aa1.76□□□□□ -2.13
CDC42BPA-212ENST00000478573 LOC110117498A0A087WWA1 95 aa1.76□□□□□ -2.13
CDC42BPA-212ENST00000478573 TRBV7-6A0A0J9YX20 115 aa1.76□□□□□ -2.13
CDC42BPA-212ENST00000478573 H7C2G1 150 aa1.76□□□□□ -2.13
CDC42BPA-212ENST00000478573 MT1HL1P0DM35 61 aa1.76□□□□□ -2.13
CDC42BPA-212ENST00000478573 KLKP1Q107X0 134 aa1.76□□□□□ -2.13
CDC42BPA-212ENST00000478573 COX7B2Q8TF08 81 aa1.76□□□□□ -2.13
CDC42BPA-212ENST00000478573 CLEC2BQ92478 149 aa1.76□□□□□ -2.13
CDC42BPA-212ENST00000478573 DPH3Q96FX2 82 aa1.76□□□□□ -2.13
CDC42BPA-212ENST00000478573 ORMDL1Q9P0S3 153 aa1.76□□□□□ -2.13
CDC42BPA-212ENST00000478573 CRCT1Q9UGL9 99 aa1.76□□□□□ -2.13
CDC42BPA-212ENST00000478573 C22orf24Q9Y442 160 aa1.76□□□□□ -2.13
CDC42BPA-212ENST00000478573 LRP1Q07954 4544 aaKnown RBP1.76□□□□□ -2.13
CDC42BPA-212ENST00000478573 FAM229BQ4G0N7 80 aa1.75□□□□□ -2.13
CDC42BPA-212ENST00000478573 C9orf116Q5BN46 136 aaPredicted RBP1.75□□□□□ -2.13
CDC42BPA-212ENST00000478573 UNQ6190/PRO20217Q6UXQ8 127 aa1.75□□□□□ -2.13
CDC42BPA-212ENST00000478573 SOSTDC1Q6X4U4 206 aa1.75□□□□□ -2.13
CDC42BPA-212ENST00000478573 SMCR5Q8TEV8 140 aa1.75□□□□□ -2.13
CDC42BPA-212ENST00000478573 UBL5Q9BZL1 73 aa1.75□□□□□ -2.13
CDC42BPA-212ENST00000478573 LAMTOR3Q9UHA4 124 aa1.75□□□□□ -2.13
CDC42BPA-212ENST00000478573 PSORS1C2Q9UIG4 136 aa1.75□□□□□ -2.13
CDC42BPA-212ENST00000478573 SERP1Q9Y6X1 66 aa1.75□□□□□ -2.13
CDC42BPA-212ENST00000478573 NPC2P61916 151 aa1.74□□□□□ -2.13
CDC42BPA-212ENST00000478573 PHF5AQ7RTV0 110 aaKnown RBP1.74□□□□□ -2.13
CDC42BPA-212ENST00000478573 SMIM11BQ8TCY0 68 aa1.74□□□□□ -2.13
CDC42BPA-212ENST00000478573 DIRC1Q969H9 104 aa1.74□□□□□ -2.13
CDC42BPA-212ENST00000478573 LINC00846Q9NV44 126 aa1.74□□□□□ -2.13
CDC42BPA-212ENST00000478573 TOMM7Q9P0U1 55 aa1.74□□□□□ -2.13
CDC42BPA-212ENST00000478573 UBE2BP63146 152 aa1.73□□□□□ -2.13
CDC42BPA-212ENST00000478573 C1orf137Q5JT78 98 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms