RNA–Protein interactions for RNA: ENST00000477126.1

TMEM42-202, Transcript of transmembrane protein 42, humanhuman

TSL 1 (best)

Gene TMEM42, Length 3,071 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM42-202ENST00000477126 UBE2DNLQ8IWF7 75 aa13.04□□□□□ -0.32
TMEM42-202ENST00000477126 ACYP2P14621 99 aa13.02□□□□□ -0.33
TMEM42-202ENST00000477126 SPRR1BP22528 89 aa13.01□□□□□ -0.33
TMEM42-202ENST00000477126 SPINK1P00995 79 aa12.99□□□□□ -0.33
TMEM42-202ENST00000477126 MIR22HGQ0VDD5 57 aa12.99□□□□□ -0.33
TMEM42-202ENST00000477126 PLA2G1BP04054 148 aaKnown RBP12.96□□□□□ -0.34
TMEM42-202ENST00000477126 CIRBP-AS1Q8TBR5 109 aa12.95□□□□□ -0.34
TMEM42-202ENST00000477126 RTL8CO15255 209 aa12.94□□□□□ -0.34
TMEM42-202ENST00000477126 ASB16-AS1Q495Z4 193 aa12.94□□□□□ -0.34
TMEM42-202ENST00000477126 TGP01266 2768 aa12.94□□□□□ -0.34
TMEM42-202ENST00000477126 CMYA5Q8N3K9 4069 aa12.93□□□□□ -0.34
TMEM42-202ENST00000477126 DNAH9Q9NYC9 4486 aa12.9□□□□□ -0.34
TMEM42-202ENST00000477126 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.9□□□□□ -0.35
TMEM42-202ENST00000477126 IGKV2D-30A0A075B6S6 120 aa12.85□□□□□ -0.35
TMEM42-202ENST00000477126 UQCR11O14957 56 aa12.85□□□□□ -0.35
TMEM42-202ENST00000477126 IGKV2-30P06310 120 aa12.85□□□□□ -0.35
TMEM42-202ENST00000477126 DNAH1Q9P2D7 4330 aa12.84□□□□□ -0.35
TMEM42-202ENST00000477126 CRIPTQ9P021 101 aa12.81□□□□□ -0.36
TMEM42-202ENST00000477126 SPATA8Q6RVD6 105 aa12.8□□□□□ -0.36
TMEM42-202ENST00000477126 WWC2-AS2Q96NR7 200 aa12.8□□□□□ -0.36
TMEM42-202ENST00000477126 FRAS1Q86XX4 4008 aa12.79□□□□□ -0.36
TMEM42-202ENST00000477126 MEGF8Q7Z7M0 2845 aa12.78□□□□□ -0.36
TMEM42-202ENST00000477126 KRTAP13-1Q8IUC0 172 aa12.77□□□□□ -0.37
TMEM42-202ENST00000477126 FBN3Q75N90 2809 aa12.76□□□□□ -0.37
TMEM42-202ENST00000477126 PSORS1C2Q9UIG4 136 aa12.75□□□□□ -0.37
TMEM42-202ENST00000477126 DMBT1Q9UGM3 2413 aaPredicted RBP12.74□□□□□ -0.37
TMEM42-202ENST00000477126 DMAC1Q96GE9 116 aa12.74□□□□□ -0.37
TMEM42-202ENST00000477126 C1orf134Q5TEV5 83 aa12.73□□□□□ -0.37
TMEM42-202ENST00000477126 KRTAP13-3Q3SY46 172 aa12.69□□□□□ -0.38
TMEM42-202ENST00000477126 C14orf177Q52M58 125 aa12.68□□□□□ -0.38
TMEM42-202ENST00000477126 DNAH7Q8WXX0 4024 aa12.66□□□□□ -0.38
TMEM42-202ENST00000477126 ZNF706Q9Y5V0 76 aaPredicted RBP12.65□□□□□ -0.38
TMEM42-202ENST00000477126 DNAH3Q8TD57 4116 aa12.65□□□□□ -0.38
TMEM42-202ENST00000477126 Q8N1X5 172 aa12.65□□□□□ -0.38
TMEM42-202ENST00000477126 HUWE1Q7Z6Z7 4374 aaKnown RBP12.63□□□□□ -0.39
TMEM42-202ENST00000477126 KRTAP24-1Q3LI83 254 aa12.62□□□□□ -0.39
TMEM42-202ENST00000477126 ZNF861PO60384 105 aa12.6□□□□□ -0.39
TMEM42-202ENST00000477126 ALMS1Q8TCU4 4167 aa12.6□□□□□ -0.39
TMEM42-202ENST00000477126 LINC00483Q53H64 154 aa12.56□□□□□ -0.4
TMEM42-202ENST00000477126 SPACA4Q8TDM5 124 aa12.55□□□□□ -0.4
TMEM42-202ENST00000477126 DNAH8Q96JB1 4490 aa12.54□□□□□ -0.4
TMEM42-202ENST00000477126 FAM229AH3BQW9 127 aa12.54□□□□□ -0.4
TMEM42-202ENST00000477126 IGLV5-52A0A0A0MRZ9 124 aa12.51□□□□□ -0.41
TMEM42-202ENST00000477126 NBDYA0A0U1RRE5 68 aa12.48□□□□□ -0.41
TMEM42-202ENST00000477126 APLNQ9ULZ1 77 aa12.46□□□□□ -0.41
TMEM42-202ENST00000477126 IGLV7-43P04211 117 aa12.43□□□□□ -0.42
TMEM42-202ENST00000477126 DNAH17Q9UFH2 4485 aa12.41□□□□□ -0.42
TMEM42-202ENST00000477126 PLECQ15149 4684 aaKnown RBP12.37□□□□□ -0.43
TMEM42-202ENST00000477126 ROMO1P60602 79 aa12.35□□□□□ -0.43
TMEM42-202ENST00000477126 TYMSOSQ8TAI1 123 aa12.35□□□□□ -0.43
TMEM42-202ENST00000477126 A0A087WTM6 91 aa12.34□□□□□ -0.43
TMEM42-202ENST00000477126 H0YAA0 97 aa12.34□□□□□ -0.43
TMEM42-202ENST00000477126 Q6ZRN7 208 aaPredicted RBP12.34□□□□□ -0.43
TMEM42-202ENST00000477126 LINC00304Q8N9R0 145 aa12.34□□□□□ -0.43
TMEM42-202ENST00000477126 KRTAP25-1Q3LHN0 102 aa12.33□□□□□ -0.44
TMEM42-202ENST00000477126 SSBP3-AS1Q7Z2R9 100 aa12.33□□□□□ -0.44
TMEM42-202ENST00000477126 Q6ZSA8 131 aa12.32□□□□□ -0.44
TMEM42-202ENST00000477126 A8MUU9 505 aa12.25□□□□□ -0.45
TMEM42-202ENST00000477126 KRTAP16-1A8MUX0 517 aa12.17□□□□□ -0.46
TMEM42-202ENST00000477126 A0A1B0GU33 70 aa12.17□□□□□ -0.46
TMEM42-202ENST00000477126 KRTAP13-2Q52LG2 175 aa12.17□□□□□ -0.46
TMEM42-202ENST00000477126 LY6G6CO95867 125 aa12.14□□□□□ -0.47
TMEM42-202ENST00000477126 KMT2AQ03164 3969 aa12.13□□□□□ -0.47
TMEM42-202ENST00000477126 P0C880 135 aa12.13□□□□□ -0.47
TMEM42-202ENST00000477126 HECTD4Q9Y4D8 3996 aa12.11□□□□□ -0.47
TMEM42-202ENST00000477126 SPINT4Q6UDR6 99 aa12.06□□□□□ -0.48
TMEM42-202ENST00000477126 C9orf92A6NGG3 77 aa12.05□□□□□ -0.48
TMEM42-202ENST00000477126 STARD9Q9P2P6 4700 aa12.04□□□□□ -0.48
TMEM42-202ENST00000477126 DNAH6Q9C0G6 4158 aa12.03□□□□□ -0.48
TMEM42-202ENST00000477126 A0A0D9SG42 100 aa12.02□□□□□ -0.48
TMEM42-202ENST00000477126 DYNC2H1Q8NCM8 4307 aaKnown RBP12.01□□□□□ -0.49
TMEM42-202ENST00000477126 H1FX-AS1Q4G0G2 97 aa11.98□□□□□ -0.49
TMEM42-202ENST00000477126 DNAH2Q9P225 4427 aa11.98□□□□□ -0.49
TMEM42-202ENST00000477126 DNAH11Q96DT5 4516 aa11.98□□□□□ -0.49
TMEM42-202ENST00000477126 PRKDCP78527 4128 aaKnown RBP11.97□□□□□ -0.49
TMEM42-202ENST00000477126 VPS13DQ5THJ4 4388 aa11.95□□□□□ -0.5
TMEM42-202ENST00000477126 K7ERS5 55 aa11.94□□□□□ -0.5
TMEM42-202ENST00000477126 C10orf95Q9H7T3 257 aa11.93□□□□□ -0.5
TMEM42-202ENST00000477126 KRTAP10-2P60368 255 aa11.92□□□□□ -0.5
TMEM42-202ENST00000477126 NUPR2A6NF83 97 aa11.92□□□□□ -0.5
TMEM42-202ENST00000477126 LRP1BQ9NZR2 4599 aa11.88□□□□□ -0.51
TMEM42-202ENST00000477126 NDUFAF8A1L188 74 aa11.87□□□□□ -0.51
TMEM42-202ENST00000477126 KRTAP3-1Q9BYR8 98 aa11.83□□□□□ -0.52
TMEM42-202ENST00000477126 COX6B2Q6YFQ2 88 aa11.83□□□□□ -0.52
TMEM42-202ENST00000477126 TPRXLQ17RH7 258 aa11.74□□□□□ -0.53
TMEM42-202ENST00000477126 KRTAP1-4P0C5Y4 121 aa11.73□□□□□ -0.53
TMEM42-202ENST00000477126 DNHD1Q96M86 4753 aa11.72□□□□□ -0.53
TMEM42-202ENST00000477126 KRTAP10-1P60331 282 aa11.7□□□□□ -0.54
TMEM42-202ENST00000477126 VPS13BQ7Z7G8 4022 aa11.61□□□□□ -0.55
TMEM42-202ENST00000477126 DNAH5Q8TE73 4624 aa11.6□□□□□ -0.55
TMEM42-202ENST00000477126 KRTAP13-4Q3LI77 160 aa11.6□□□□□ -0.55
TMEM42-202ENST00000477126 SMR3BP02814 79 aaPredicted RBP11.57□□□□□ -0.56
TMEM42-202ENST00000477126 RPL37P61927 97 aaKnown RBP11.57□□□□□ -0.56
TMEM42-202ENST00000477126 FAT2Q9NYQ8 4349 aa11.53□□□□□ -0.56
TMEM42-202ENST00000477126 C20orf166-AS1Q96NR2 134 aa11.52□□□□□ -0.56
TMEM42-202ENST00000477126 HYDINQ4G0P3 5121 aa11.46□□□□□ -0.57
TMEM42-202ENST00000477126 KRTAP10-6P60371 365 aaPredicted RBP11.36□□□□□ -0.59
TMEM42-202ENST00000477126 KRTAP15-1Q3LI76 137 aa11.34□□□□□ -0.59
TMEM42-202ENST00000477126 PKD1P98161 4303 aa11.29□□□□□ -0.6
TMEM42-202ENST00000477126 KRTAP12-2P59991 146 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms