RNA–Protein interactions for RNA: ENST00000476539.5

SUPT20H-214, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 528 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-214ENST00000476539 MAP1AP78559 2803 aaPredicted RBP1.47□□□□□ -2.17
SUPT20H-214ENST00000476539 FBN3Q75N90 2809 aa1.47□□□□□ -2.17
SUPT20H-214ENST00000476539 GVQW2A0A096LPI5 108 aaPredicted RBP1.46□□□□□ -2.18
SUPT20H-214ENST00000476539 LINC00959A0A1B0GUT2 108 aa1.46□□□□□ -2.18
SUPT20H-214ENST00000476539 H3BUX3 64 aa1.46□□□□□ -2.18
SUPT20H-214ENST00000476539 ANGP03950 147 aaKnown RBP1.46□□□□□ -2.18
SUPT20H-214ENST00000476539 DEFB131AP59861 70 aa1.46□□□□□ -2.18
SUPT20H-214ENST00000476539 NREPQ16612 68 aa1.46□□□□□ -2.18
SUPT20H-214ENST00000476539 CYP4F30PQ9H0H9 118 aa1.46□□□□□ -2.18
SUPT20H-214ENST00000476539 LINC00474Q9P2X8 69 aa1.46□□□□□ -2.18
SUPT20H-214ENST00000476539 SPG11Q96JI7 2443 aa1.46□□□□□ -2.18
SUPT20H-214ENST00000476539 AKAP9Q99996 3911 aa1.46□□□□□ -2.18
SUPT20H-214ENST00000476539 HRNRQ86YZ3 2850 aaPredicted RBP1.45□□□□□ -2.18
SUPT20H-214ENST00000476539 BSNQ9UPA5 3926 aa1.45□□□□□ -2.18
SUPT20H-214ENST00000476539 NBPF19A0A087WUL8 3843 aa1.45□□□□□ -2.18
SUPT20H-214ENST00000476539 M0R2N4 97 aa1.45□□□□□ -2.18
SUPT20H-214ENST00000476539 COX7BP24311 80 aa1.45□□□□□ -2.18
SUPT20H-214ENST00000476539 CCDC168Q8NDH2 2452 aa1.45□□□□□ -2.18
SUPT20H-214ENST00000476539 MTORP42345 2549 aa1.44□□□□□ -2.18
SUPT20H-214ENST00000476539 IGLV5-48A0A075B6I7 105 aa1.44□□□□□ -2.18
SUPT20H-214ENST00000476539 TRGV1A0A0A0MS02 117 aa1.44□□□□□ -2.18
SUPT20H-214ENST00000476539 NUPR2A6NF83 97 aa1.44□□□□□ -2.18
SUPT20H-214ENST00000476539 LY6G6CO95867 125 aa1.44□□□□□ -2.18
SUPT20H-214ENST00000476539 ELOF1P60002 83 aaKnown RBP1.44□□□□□ -2.18
SUPT20H-214ENST00000476539 HAMPP81172 84 aa1.44□□□□□ -2.18
SUPT20H-214ENST00000476539 Q6ZQY7 126 aa1.44□□□□□ -2.18
SUPT20H-214ENST00000476539 TOMM7Q9P0U1 55 aa1.44□□□□□ -2.18
SUPT20H-214ENST00000476539 SPENQ96T58 3664 aaKnown RBP1.44□□□□□ -2.18
SUPT20H-214ENST00000476539 FLNAP21333 2647 aaKnown RBP1.43□□□□□ -2.18
SUPT20H-214ENST00000476539 CSPG4Q6UVK1 2322 aa1.43□□□□□ -2.18
SUPT20H-214ENST00000476539 ZFHX3Q15911 3703 aa1.43□□□□□ -2.18
SUPT20H-214ENST00000476539 MXRA5Q9NR99 2828 aa1.43□□□□□ -2.18
SUPT20H-214ENST00000476539 HTN1P15515 57 aa1.43□□□□□ -2.18
SUPT20H-214ENST00000476539 C10orf99Q6UWK7 81 aa1.43□□□□□ -2.18
SUPT20H-214ENST00000476539 CSMD2Q7Z408 3487 aa1.42□□□□□ -2.18
SUPT20H-214ENST00000476539 AKAP6Q13023 2319 aa1.42□□□□□ -2.18
SUPT20H-214ENST00000476539 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.42□□□□□ -2.182e-11■■■■■ 43
SUPT20H-214ENST00000476539 TRAV22A0A0B4J277 110 aa1.42□□□□□ -2.18
SUPT20H-214ENST00000476539 LOC101927531A0A1B0GV80 90 aa1.42□□□□□ -2.18
SUPT20H-214ENST00000476539 ETDCA0A1B0GVM5 59 aa1.42□□□□□ -2.18
SUPT20H-214ENST00000476539 INE1O15225 51 aa1.42□□□□□ -2.18
SUPT20H-214ENST00000476539 NDUFB1O75438 58 aa1.42□□□□□ -2.18
SUPT20H-214ENST00000476539 UBE2DNLQ8IWF7 75 aa1.42□□□□□ -2.18
SUPT20H-214ENST00000476539 SPRR4Q96PI1 79 aa1.42□□□□□ -2.18
SUPT20H-214ENST00000476539 LIMD2Q9BT23 127 aa1.42□□□□□ -2.18
SUPT20H-214ENST00000476539 KCNQ1DNQ9H478 68 aa1.42□□□□□ -2.18
SUPT20H-214ENST00000476539 NOP10Q9NPE3 64 aaKnown RBP1.42□□□□□ -2.18
SUPT20H-214ENST00000476539 CDC42SE1Q9NRR8 79 aa1.42□□□□□ -2.18
SUPT20H-214ENST00000476539 WNK1Q9H4A3 2382 aa1.42□□□□□ -2.18
SUPT20H-214ENST00000476539 MIR22HGQ0VDD5 57 aa1.41□□□□□ -2.18
SUPT20H-214ENST00000476539 Q5VV11 94 aa1.41□□□□□ -2.18
SUPT20H-214ENST00000476539 PRO0255Q9UI72 69 aa1.41□□□□□ -2.18
SUPT20H-214ENST00000476539 JMJD1CQ15652 2540 aa1.41□□□□□ -2.18
SUPT20H-214ENST00000476539 COL6A5A8TX70 2615 aa1.41□□□□□ -2.18
SUPT20H-214ENST00000476539 HCG22E2RYF7 251 aa1.4□□□□□ -2.19
SUPT20H-214ENST00000476539 K7EIL1 84 aa1.4□□□□□ -2.19
SUPT20H-214ENST00000476539 SPRR1AP35321 89 aa1.4□□□□□ -2.19
SUPT20H-214ENST00000476539 SPAG11BQ08648 103 aa1.4□□□□□ -2.19
SUPT20H-214ENST00000476539 DEFB136Q30KP8 78 aa1.4□□□□□ -2.19
SUPT20H-214ENST00000476539 C9orf116Q5BN46 136 aaPredicted RBP1.4□□□□□ -2.19
SUPT20H-214ENST00000476539 PLAC8Q9NZF1 115 aa1.4□□□□□ -2.19
SUPT20H-214ENST00000476539 C6orf48Q9UBA6 75 aa1.4□□□□□ -2.19
SUPT20H-214ENST00000476539 CSMD1Q96PZ7 3565 aa1.4□□□□□ -2.19
SUPT20H-214ENST00000476539 NSD1Q96L73 2696 aaPredicted RBP1.4□□□□□ -2.19
SUPT20H-214ENST00000476539 ATRQ13535 2644 aa1.39□□□□□ -2.19
SUPT20H-214ENST00000476539 SONP18583 2426 aaKnown RBP1.39□□□□□ -2.19
SUPT20H-214ENST00000476539 LELP1Q5T871 98 aa1.39□□□□□ -2.19
SUPT20H-214ENST00000476539 CASC2Q6XLA1 102 aa1.39□□□□□ -2.19
SUPT20H-214ENST00000476539 NBEAL1Q6ZS30 2694 aa1.39□□□□□ -2.19
SUPT20H-214ENST00000476539 PKD1L1Q8TDX9 2849 aa1.39□□□□□ -2.19
SUPT20H-214ENST00000476539 ACANP16112 2415 aa1.38□□□□□ -2.19
SUPT20H-214ENST00000476539 H3BNG1 76 aa1.38□□□□□ -2.19
SUPT20H-214ENST00000476539 Q6ZRX8 168 aa1.38□□□□□ -2.19
SUPT20H-214ENST00000476539 LINC00208Q96KT6 92 aa1.38□□□□□ -2.19
SUPT20H-214ENST00000476539 LINC01558Q9Y6Z2 57 aa1.38□□□□□ -2.19
SUPT20H-214ENST00000476539 TLN2Q9Y4G6 2542 aa1.38□□□□□ -2.19
SUPT20H-214ENST00000476539 VPS13CQ709C8 3753 aa1.37□□□□□ -2.19
SUPT20H-214ENST00000476539 CHKB-CPT1BH3BT56 60 aa1.37□□□□□ -2.19
SUPT20H-214ENST00000476539 K7EQZ3 153 aa1.37□□□□□ -2.19
SUPT20H-214ENST00000476539 DEFB130BP0DP73 79 aa1.37□□□□□ -2.19
SUPT20H-214ENST00000476539 DEFB130AP0DP74 79 aa1.37□□□□□ -2.19
SUPT20H-214ENST00000476539 SPRR1BP22528 89 aa1.36□□□□□ -2.19
SUPT20H-214ENST00000476539 CLPSL2Q6UWE3 100 aa1.36□□□□□ -2.19
SUPT20H-214ENST00000476539 ZANQ9Y493 2812 aa1.36□□□□□ -2.19
SUPT20H-214ENST00000476539 MUC19Q7Z5P9 8384 aa1.35□□□□□ -2.19
SUPT20H-214ENST00000476539 STAB1Q9NY15 2570 aa1.35□□□□□ -2.19
SUPT20H-214ENST00000476539 DEFB131BA0A096LNP1 70 aa1.35□□□□□ -2.19
SUPT20H-214ENST00000476539 A0A096LPF7 62 aa1.35□□□□□ -2.19
SUPT20H-214ENST00000476539 H0Y9P7 68 aa1.35□□□□□ -2.19
SUPT20H-214ENST00000476539 SPART-AS1P0CW21 52 aa1.35□□□□□ -2.19
SUPT20H-214ENST00000476539 PRR15LQ9BU68 103 aa1.35□□□□□ -2.19
SUPT20H-214ENST00000476539 WFDC10AQ9H1F0 79 aa1.35□□□□□ -2.19
SUPT20H-214ENST00000476539 LINC00472Q9H8W2 130 aa1.35□□□□□ -2.19
SUPT20H-214ENST00000476539 TP53AIP1Q9HCN2 124 aa1.35□□□□□ -2.19
SUPT20H-214ENST00000476539 TENM1Q9UKZ4 2725 aa1.35□□□□□ -2.19
SUPT20H-214ENST00000476539 SVEP1Q4LDE5 3571 aa1.34□□□□□ -2.19
SUPT20H-214ENST00000476539 FLG2Q5D862 2391 aaPredicted RBP1.34□□□□□ -2.19
SUPT20H-214ENST00000476539 TGP01266 2768 aa1.34□□□□□ -2.19
SUPT20H-214ENST00000476539 MEGF8Q7Z7M0 2845 aa1.34□□□□□ -2.19
SUPT20H-214ENST00000476539 HTN3P15516 51 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms