RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 MIC13Q5XKP0 118 aa0.83□□□□□ -2.28
CALD1-216ENST00000473714 CYP2G1PQ6ZSU1 146 aa0.83□□□□□ -2.28
CALD1-216ENST00000473714 Q6ZUT4 128 aa0.83□□□□□ -2.28
CALD1-216ENST00000473714 ACBD7Q8N6N7 88 aa0.83□□□□□ -2.28
CALD1-216ENST00000473714 TRGV9Q99603 122 aa0.83□□□□□ -2.28
CALD1-216ENST00000473714 TRBV7-3A0A075B6L6 115 aa0.82□□□□□ -2.28
CALD1-216ENST00000473714 H3BQ15 152 aa0.82□□□□□ -2.28
CALD1-216ENST00000473714 NMSQ5H8A3 153 aa0.82□□□□□ -2.28
CALD1-216ENST00000473714 Q6AWC8 147 aa0.82□□□□□ -2.28
CALD1-216ENST00000473714 NAA60Q9H7X0 242 aa0.82□□□□□ -2.28
CALD1-216ENST00000473714 TMEM242Q9NWH2 141 aa0.82□□□□□ -2.28
CALD1-216ENST00000473714 MRPL35Q9NZE8 188 aaKnown RBP0.82□□□□□ -2.28
CALD1-216ENST00000473714 TRBV25-1A0A075B6N4 114 aa0.81□□□□□ -2.28
CALD1-216ENST00000473714 A0A0G2JND7 137 aa0.81□□□□□ -2.28
CALD1-216ENST00000473714 LOC101927531A0A1B0GV80 90 aa0.81□□□□□ -2.28
CALD1-216ENST00000473714 CFDP00746 253 aaPredicted RBP0.81□□□□□ -2.28
CALD1-216ENST00000473714 IGLC2P0DOY2 106 aa0.81□□□□□ -2.28
CALD1-216ENST00000473714 SLC25A6P12236 298 aa0.81□□□□□ -2.28
CALD1-216ENST00000473714 HIST1H1DP16402 221 aaKnown RBP0.81□□□□□ -2.28
CALD1-216ENST00000473714 TMEM141Q96I45 108 aa0.81□□□□□ -2.28
CALD1-216ENST00000473714 AQP10Q96PS8 301 aa0.81□□□□□ -2.28
CALD1-216ENST00000473714 TRBV6-1A0A0K0K1D8 114 aa0.8□□□□□ -2.28
CALD1-216ENST00000473714 TEX49A0A1B0GTD5 131 aa0.8□□□□□ -2.28
CALD1-216ENST00000473714 A0A1W2PPM0 123 aa0.8□□□□□ -2.28
CALD1-216ENST00000473714 NDUFB6O95139 128 aa0.8□□□□□ -2.28
CALD1-216ENST00000473714 PRLHP81277 87 aa0.8□□□□□ -2.28
CALD1-216ENST00000473714 S100A7L2Q5SY68 101 aa0.8□□□□□ -2.28
CALD1-216ENST00000473714 FAM74A4Q5TZK3 123 aa0.8□□□□□ -2.28
CALD1-216ENST00000473714 CEBPZOSA8MTT3 80 aa0.79□□□□□ -2.28
CALD1-216ENST00000473714 S100A10P60903 97 aa0.79□□□□□ -2.28
CALD1-216ENST00000473714 ZNF56Q15929 161 aa0.79□□□□□ -2.28
CALD1-216ENST00000473714 SPTSSBQ8NFR3 76 aa0.79□□□□□ -2.28
CALD1-216ENST00000473714 IFI27L1Q96BM0 104 aa0.79□□□□□ -2.28
CALD1-216ENST00000473714 SPRR4Q96PI1 79 aa0.79□□□□□ -2.28
CALD1-216ENST00000473714 SEC11CQ9BY50 192 aa0.79□□□□□ -2.28
CALD1-216ENST00000473714 FXYD6Q9H0Q3 95 aa0.79□□□□□ -2.28
CALD1-216ENST00000473714 TRAV21A0A0B4J279 112 aa0.78□□□□□ -2.28
CALD1-216ENST00000473714 F6UZH7 168 aa0.78□□□□□ -2.28
CALD1-216ENST00000473714 MEIG1Q5JSS6 88 aa0.78□□□□□ -2.28
CALD1-216ENST00000473714 SSBP3-AS1Q7Z2R9 100 aa0.78□□□□□ -2.28
CALD1-216ENST00000473714 DSCR8Q96T75 97 aa0.78□□□□□ -2.28
CALD1-216ENST00000473714 SPRR2GQ9BYE4 73 aa0.78□□□□□ -2.28
CALD1-216ENST00000473714 C6orf48Q9UBA6 75 aa0.78□□□□□ -2.28
CALD1-216ENST00000473714 LINC00959A0A1B0GUT2 108 aa0.77□□□□□ -2.29
CALD1-216ENST00000473714 GNGT2O14610 69 aa0.77□□□□□ -2.29
CALD1-216ENST00000473714 AKAIN1P0CW23 69 aa0.77□□□□□ -2.29
CALD1-216ENST00000473714 SMIM6P0DI80 62 aa0.77□□□□□ -2.29
CALD1-216ENST00000473714 GNG2P59768 71 aa0.77□□□□□ -2.29
CALD1-216ENST00000473714 UBE2G1P62253 170 aa0.77□□□□□ -2.29
CALD1-216ENST00000473714 SPAG11BQ08648 103 aa0.77□□□□□ -2.29
CALD1-216ENST00000473714 KRTAP19-3Q7Z4W3 81 aa0.77□□□□□ -2.29
CALD1-216ENST00000473714 LINC00208Q96KT6 92 aa0.77□□□□□ -2.29
CALD1-216ENST00000473714 A0A1B0GV90 55 aa0.76□□□□□ -2.29
CALD1-216ENST00000473714 F2Z2F3 143 aa0.76□□□□□ -2.29
CALD1-216ENST00000473714 FGF7P21781 194 aa0.76□□□□□ -2.29
CALD1-216ENST00000473714 MT1XP80297 61 aa0.76□□□□□ -2.29
CALD1-216ENST00000473714 MRPS10P82664 201 aaKnown RBP0.76□□□□□ -2.29
CALD1-216ENST00000473714 KLKP1Q107X0 134 aa0.76□□□□□ -2.29
CALD1-216ENST00000473714 WHAMMP3Q1A5X7 153 aa0.76□□□□□ -2.29
CALD1-216ENST00000473714 LENEPQ9Y5L5 61 aa0.76□□□□□ -2.29
CALD1-216ENST00000473714 TRBV10-3A0A0K0K1G6 114 aa0.75□□□□□ -2.29
CALD1-216ENST00000473714 H3BVH4 76 aa0.75□□□□□ -2.29
CALD1-216ENST00000473714 NDUFA1O15239 70 aa0.75□□□□□ -2.29
CALD1-216ENST00000473714 DLEU1O43261 78 aa0.75□□□□□ -2.29
CALD1-216ENST00000473714 S100A1P23297 94 aa0.75□□□□□ -2.29
CALD1-216ENST00000473714 SSBP1Q04837 148 aaKnown RBP0.75□□□□□ -2.29
CALD1-216ENST00000473714 C5orf38Q86SI9 138 aa0.75□□□□□ -2.29
CALD1-216ENST00000473714 C20orf197Q8N268 126 aa0.75□□□□□ -2.29
CALD1-216ENST00000473714 SCN3BQ9NY72 215 aa0.75□□□□□ -2.29
CALD1-216ENST00000473714 SERP1Q9Y6X1 66 aa0.75□□□□□ -2.29
CALD1-216ENST00000473714 IAPPP10997 89 aa0.74□□□□□ -2.29
CALD1-216ENST00000473714 C10orf113Q5VZT2 155 aa0.74□□□□□ -2.29
CALD1-216ENST00000473714 COX7B2Q8TF08 81 aa0.74□□□□□ -2.29
CALD1-216ENST00000473714 PLAC4Q8WY50 150 aa0.74□□□□□ -2.29
CALD1-216ENST00000473714 V9GYV3 84 aa0.74□□□□□ -2.29
CALD1-216ENST00000473714 ARMS2P0C7Q2 107 aa0.73□□□□□ -2.29
CALD1-216ENST00000473714 NPC2P61916 151 aa0.73□□□□□ -2.29
CALD1-216ENST00000473714 MRPL54Q6P161 138 aaKnown RBP0.73□□□□□ -2.29
CALD1-216ENST00000473714 SCP2D1Q9UJQ7 156 aa0.73□□□□□ -2.29
CALD1-216ENST00000473714 TRAV13-2A0A0B4J235 113 aa0.72□□□□□ -2.29
CALD1-216ENST00000473714 PHGR1C9JFL3 82 aa0.72□□□□□ -2.29
CALD1-216ENST00000473714 MT1GP13640 62 aa0.72□□□□□ -2.29
CALD1-216ENST00000473714 GNG4P50150 75 aa0.72□□□□□ -2.29
CALD1-216ENST00000473714 C9orf153Q5TBE3 101 aa0.72□□□□□ -2.29
CALD1-216ENST00000473714 GTF2H5Q6ZYL4 71 aa0.72□□□□□ -2.29
CALD1-216ENST00000473714 DEFB107AQ8IZN7 70 aa0.72□□□□□ -2.29
CALD1-216ENST00000473714 C8orf59Q8N0T1 100 aaPredicted RBP0.72□□□□□ -2.29
CALD1-216ENST00000473714 SVBPQ8N300 66 aa0.72□□□□□ -2.29
CALD1-216ENST00000473714 C2orf88Q9BSF0 95 aa0.72□□□□□ -2.29
CALD1-216ENST00000473714 SPANXDQ9BXN6 97 aa0.72□□□□□ -2.29
CALD1-216ENST00000473714 M0QY20 66 aa0.71□□□□□ -2.3
CALD1-216ENST00000473714 ACYP2P14621 99 aa0.71□□□□□ -2.3
CALD1-216ENST00000473714 ELOF1P60002 83 aaKnown RBP0.71□□□□□ -2.3
CALD1-216ENST00000473714 FAM167A-AS1Q96KT0 104 aa0.71□□□□□ -2.3
CALD1-216ENST00000473714 MGST2Q99735 147 aa0.71□□□□□ -2.3
CALD1-216ENST00000473714 NMES1Q9C002 83 aa0.71□□□□□ -2.3
CALD1-216ENST00000473714 CACFD1Q9UGQ2 172 aa0.71□□□□□ -2.3
CALD1-216ENST00000473714 LOC100130705A0A1B0GUX0 176 aa0.7□□□□□ -2.3
CALD1-216ENST00000473714 LINC00587B1AMM8 73 aa0.7□□□□□ -2.3
CALD1-216ENST00000473714 TCEAL7Q9BRU2 100 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms