RNA–Protein interactions for RNA: ENST00000473062.1

CLCC1-208, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-208ENST00000473062 LTN1O94822 1766 aa-1.21□□□□□ -2.6
CLCC1-208ENST00000473062 ANKRD36CQ5JPF3 1778 aa-1.21□□□□□ -2.6
CLCC1-208ENST00000473062 ADGRG4Q8IZF6 3080 aa-1.21□□□□□ -2.6
CLCC1-208ENST00000473062 DEFB131BA0A096LNP1 70 aa-1.22□□□□□ -2.6
CLCC1-208ENST00000473062 SNRPFP62306 86 aaKnown RBP-1.22□□□□□ -2.6
CLCC1-208ENST00000473062 NREPQ16612 68 aa-1.22□□□□□ -2.6
CLCC1-208ENST00000473062 LINC00643Q86TS7 51 aa-1.22□□□□□ -2.6
CLCC1-208ENST00000473062 SPENQ96T58 3664 aaKnown RBP-1.22□□□□□ -2.6
CLCC1-208ENST00000473062 DIP2BQ9P265 1576 aa-1.22□□□□□ -2.61
CLCC1-208ENST00000473062 MYO3AQ8NEV4 1616 aa-1.22□□□□□ -2.61
CLCC1-208ENST00000473062 CEP162Q5TB80 1403 aa-1.23□□□□□ -2.61
CLCC1-208ENST00000473062 TOGARAM1Q9Y4F4 1720 aa-1.23□□□□□ -2.61
CLCC1-208ENST00000473062 TLN1Q9Y490 2541 aaKnown RBP-1.23□□□□□ -2.61
CLCC1-208ENST00000473062 MT1GP13640 62 aa-1.23□□□□□ -2.61
CLCC1-208ENST00000473062 BVES-AS1Q5T3Y7 98 aa-1.23□□□□□ -2.61
CLCC1-208ENST00000473062 MINOS1Q5TGZ0 78 aa-1.23□□□□□ -2.61
CLCC1-208ENST00000473062 NOP10Q9NPE3 64 aaKnown RBP-1.23□□□□□ -2.61
CLCC1-208ENST00000473062 SMG1Q96Q15 3661 aaKnown RBP-1.23□□□□□ -2.61
CLCC1-208ENST00000473062 KIAA0586Q9BVV6 1533 aa-1.24□□□□□ -2.61
CLCC1-208ENST00000473062 ITPR2Q14571 2701 aa-1.24□□□□□ -2.61
CLCC1-208ENST00000473062 PVALEFA0A1B0GWK0 134 aa-1.24□□□□□ -2.61
CLCC1-208ENST00000473062 PARP4Q9UKK3 1724 aaKnown RBP-1.24□□□□□ -2.61
CLCC1-208ENST00000473062 CCDC88BA6NC98 1476 aa-1.24□□□□□ -2.61
CLCC1-208ENST00000473062 A0A087WXM4 84 aa-1.25□□□□□ -2.61
CLCC1-208ENST00000473062 H3BUA1 57 aa-1.25□□□□□ -2.61
CLCC1-208ENST00000473062 RPS27P42677 84 aaKnown RBP-1.25□□□□□ -2.61
CLCC1-208ENST00000473062 RPS27LQ71UM5 84 aaKnown RBP-1.25□□□□□ -2.61
CLCC1-208ENST00000473062 S100A16Q96FQ6 103 aaKnown RBP-1.25□□□□□ -2.61
CLCC1-208ENST00000473062 UBL5Q9BZL1 73 aa-1.25□□□□□ -2.61
CLCC1-208ENST00000473062 THOC2Q8NI27 1593 aaKnown RBP-1.25□□□□□ -2.61
CLCC1-208ENST00000473062 MGAQ8IWI9 3026 aa-1.26□□□□□ -2.61
CLCC1-208ENST00000473062 DDX60LQ5H9U9 1706 aaKnown RBP-1.26□□□□□ -2.61
CLCC1-208ENST00000473062 DMXL2Q8TDJ6 3036 aa-1.26□□□□□ -2.61
CLCC1-208ENST00000473062 HFM1A2PYH4 1435 aa-1.26□□□□□ -2.61
CLCC1-208ENST00000473062 CDC42BPGQ6DT37 1551 aa-1.26□□□□□ -2.61
CLCC1-208ENST00000473062 LINC01546A6NGU7 62 aa-1.27□□□□□ -2.61
CLCC1-208ENST00000473062 SFTA3P0C7M3 94 aa-1.27□□□□□ -2.61
CLCC1-208ENST00000473062 FCER1GP30273 86 aa-1.27□□□□□ -2.61
CLCC1-208ENST00000473062 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.27□□□□□ -2.61
CLCC1-208ENST00000473062 CRIP1P50238 77 aa-1.28□□□□□ -2.61
CLCC1-208ENST00000473062 PYY3Q5JQD4 70 aa-1.28□□□□□ -2.61
CLCC1-208ENST00000473062 ATP5EP2Q5VTU8 51 aa-1.28□□□□□ -2.61
CLCC1-208ENST00000473062 SNHG12Q9BXW3 62 aa-1.28□□□□□ -2.61
CLCC1-208ENST00000473062 Q9H521 79 aa-1.28□□□□□ -2.61
CLCC1-208ENST00000473062 ARFGEF2Q9Y6D5 1785 aa-1.29□□□□□ -2.62
CLCC1-208ENST00000473062 UBR1Q8IWV7 1749 aa-1.29□□□□□ -2.62
CLCC1-208ENST00000473062 ARHGAP35Q9NRY4 1499 aa-1.29□□□□□ -2.62
CLCC1-208ENST00000473062 MT2AP02795 61 aa-1.29□□□□□ -2.62
CLCC1-208ENST00000473062 MT1MQ8N339 61 aa-1.29□□□□□ -2.62
CLCC1-208ENST00000473062 C6orf48Q9UBA6 75 aa-1.29□□□□□ -2.62
CLCC1-208ENST00000473062 ITSN1Q15811 1721 aa-1.29□□□□□ -2.62
CLCC1-208ENST00000473062 ITSN2Q9NZM3 1697 aa-1.29□□□□□ -2.62
CLCC1-208ENST00000473062 TMEM131LA2VDJ0 1609 aa-1.29□□□□□ -2.62
CLCC1-208ENST00000473062 PIK3C2BO00750 1634 aa-1.29□□□□□ -2.62
CLCC1-208ENST00000473062 KANTRA0A1W2PQU2 76 aa-1.3□□□□□ -2.62
CLCC1-208ENST00000473062 HMGA1P17096 107 aaKnown RBP-1.3□□□□□ -2.62
CLCC1-208ENST00000473062 PKIAP61925 76 aa-1.3□□□□□ -2.62
CLCC1-208ENST00000473062 KCNQ1DNQ9H478 68 aa-1.3□□□□□ -2.62
CLCC1-208ENST00000473062 KIF1AQ12756 1690 aa-1.3□□□□□ -2.62
CLCC1-208ENST00000473062 PLCH1Q4KWH8 1693 aa-1.3□□□□□ -2.62
CLCC1-208ENST00000473062 RALGAPBQ86X10 1494 aa-1.31□□□□□ -2.62
CLCC1-208ENST00000473062 LY75O60449 1722 aa-1.31□□□□□ -2.62
CLCC1-208ENST00000473062 ZC3H13Q5T200 1668 aaKnown RBP-1.31□□□□□ -2.62
CLCC1-208ENST00000473062 M0QY20 66 aa-1.31□□□□□ -2.62
CLCC1-208ENST00000473062 SMIM13P0DJ93 91 aa-1.31□□□□□ -2.62
CLCC1-208ENST00000473062 NCBP2-AS2Q69YL0 99 aa-1.31□□□□□ -2.62
CLCC1-208ENST00000473062 MAST1Q9Y2H9 1570 aa-1.31□□□□□ -2.62
CLCC1-208ENST00000473062 ATMQ13315 3056 aa-1.32□□□□□ -2.62
CLCC1-208ENST00000473062 RICTORQ6R327 1708 aa-1.32□□□□□ -2.62
CLCC1-208ENST00000473062 ETDCA0A1B0GVM5 59 aa-1.33□□□□□ -2.62
CLCC1-208ENST00000473062 S100A8P05109 93 aa-1.33□□□□□ -2.62
CLCC1-208ENST00000473062 SPART-AS1P0CW21 52 aa-1.33□□□□□ -2.62
CLCC1-208ENST00000473062 M0QZ58 72 aa-1.34□□□□□ -2.62
CLCC1-208ENST00000473062 DEFB4AO15263 64 aa-1.34□□□□□ -2.62
CLCC1-208ENST00000473062 V9GYS6 101 aa-1.34□□□□□ -2.62
CLCC1-208ENST00000473062 NRAPQ86VF7 1730 aa-1.35□□□□□ -2.62
CLCC1-208ENST00000473062 KIF14Q15058 1648 aa-1.35□□□□□ -2.63
CLCC1-208ENST00000473062 MT1BP07438 61 aa-1.35□□□□□ -2.63
CLCC1-208ENST00000473062 ENHOQ6UWT2 76 aa-1.35□□□□□ -2.63
CLCC1-208ENST00000473062 ANKRD26Q9UPS8 1709 aa-1.35□□□□□ -2.63
CLCC1-208ENST00000473062 KDM5DQ9BY66 1539 aa-1.35□□□□□ -2.63
CLCC1-208ENST00000473062 CSMD2Q7Z408 3487 aa-1.36□□□□□ -2.63
CLCC1-208ENST00000473062 LRRIQ1Q96JM4 1722 aa-1.36□□□□□ -2.63
CLCC1-208ENST00000473062 ERVK-7P63135 1459 aa-1.37□□□□□ -2.63
CLCC1-208ENST00000473062 VPS8Q8N3P4 1428 aa-1.37□□□□□ -2.63
CLCC1-208ENST00000473062 CFAP43Q8NDM7 1665 aa-1.37□□□□□ -2.63
CLCC1-208ENST00000473062 MAP3K4Q9Y6R4 1608 aa-1.37□□□□□ -2.63
CLCC1-208ENST00000473062 INO80Q9ULG1 1556 aaPredicted RBP-1.38□□□□□ -2.63
CLCC1-208ENST00000473062 ABCC3O15438 1527 aa-1.38□□□□□ -2.63
CLCC1-208ENST00000473062 KRTAP20-1Q3LI63 56 aa-1.38□□□□□ -2.63
CLCC1-208ENST00000473062 DEFB121Q5J5C9 76 aa-1.38□□□□□ -2.63
CLCC1-208ENST00000473062 TJP1Q07157 1748 aa-1.39□□□□□ -2.63
CLCC1-208ENST00000473062 A8MTW9 85 aa-1.39□□□□□ -2.63
CLCC1-208ENST00000473062 ADIRFQ15847 76 aa-1.39□□□□□ -2.63
CLCC1-208ENST00000473062 ABRACLQ9P1F3 81 aa-1.39□□□□□ -2.63
CLCC1-208ENST00000473062 CD163L1Q9NR16 1453 aa-1.39□□□□□ -2.63
CLCC1-208ENST00000473062 AKAP12Q02952 1782 aa-1.39□□□□□ -2.63
CLCC1-208ENST00000473062 RNF17Q9BXT8 1623 aaKnown RBP-1.4□□□□□ -2.63
CLCC1-208ENST00000473062 BOD1L1Q8NFC6 3051 aa-1.4□□□□□ -2.63
CLCC1-208ENST00000473062 H3BUT2 72 aa-1.4□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms