RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 FLG2Q5D862 2391 aaPredicted RBP7.57□□□□□ -1.2
USP11-206ENST00000469080 A0A1B0GW54 56 aa7.57□□□□□ -1.2
USP11-206ENST00000469080 CDK2AP2O75956 126 aa7.57□□□□□ -1.2
USP11-206ENST00000469080 PLAC8Q9NZF1 115 aa7.56□□□□□ -1.2
USP11-206ENST00000469080 PSORS1C2Q9UIG4 136 aa7.56□□□□□ -1.2
USP11-206ENST00000469080 CNBPP62633 177 aaKnown RBP7.55□□□□□ -1.2
USP11-206ENST00000469080 SPRR4Q96PI1 79 aa7.54□□□□□ -1.2
USP11-206ENST00000469080 DMBT1Q9UGM3 2413 aaPredicted RBP7.54□□□□□ -1.2
USP11-206ENST00000469080 IGHV6-1A0A0B4J1U7 121 aa7.54□□□□□ -1.2
USP11-206ENST00000469080 HRES1P13985 223 aa7.54□□□□□ -1.2
USP11-206ENST00000469080 SMR3BP02814 79 aaPredicted RBP7.53□□□□□ -1.2
USP11-206ENST00000469080 KRTAP4-16G5E9R7 235 aaPredicted RBP7.53□□□□□ -1.2
USP11-206ENST00000469080 SPRR1AP35321 89 aa7.51□□□□□ -1.21
USP11-206ENST00000469080 KRTAP10-2P60368 255 aa7.51□□□□□ -1.21
USP11-206ENST00000469080 PLA2G2DQ9UNK4 145 aa7.51□□□□□ -1.21
USP11-206ENST00000469080 STARD9Q9P2P6 4700 aa7.5□□□□□ -1.21
USP11-206ENST00000469080 KRTAP29-1A8MX34 341 aaPredicted RBP7.5□□□□□ -1.21
USP11-206ENST00000469080 KMT2AQ03164 3969 aa7.49□□□□□ -1.21
USP11-206ENST00000469080 A0A0A0MQY5 61 aa7.49□□□□□ -1.21
USP11-206ENST00000469080 IGLV5-37A0A075B6J1 123 aa7.47□□□□□ -1.21
USP11-206ENST00000469080 Q6ZRN7 208 aaPredicted RBP7.46□□□□□ -1.21
USP11-206ENST00000469080 ASB16-AS1Q495Z4 193 aa7.45□□□□□ -1.22
USP11-206ENST00000469080 A0A1B0GU69 56 aa7.45□□□□□ -1.22
USP11-206ENST00000469080 WWC2-AS2Q96NR7 200 aa7.44□□□□□ -1.22
USP11-206ENST00000469080 MIR22HGQ0VDD5 57 aa7.44□□□□□ -1.22
USP11-206ENST00000469080 SPACA4Q8TDM5 124 aa7.43□□□□□ -1.22
USP11-206ENST00000469080 ROMO1P60602 79 aa7.43□□□□□ -1.22
USP11-206ENST00000469080 A8MWP4 228 aa7.41□□□□□ -1.22
USP11-206ENST00000469080 ZNF861PO60384 105 aa7.38□□□□□ -1.23
USP11-206ENST00000469080 IGLV8-61A0A075B6I0 122 aa7.37□□□□□ -1.23
USP11-206ENST00000469080 SPATA8Q6RVD6 105 aa7.37□□□□□ -1.23
USP11-206ENST00000469080 UQCR11O14957 56 aa7.36□□□□□ -1.23
USP11-206ENST00000469080 KRTAP10-1P60331 282 aa7.36□□□□□ -1.23
USP11-206ENST00000469080 DNAH1Q9P2D7 4330 aa7.35□□□□□ -1.23
USP11-206ENST00000469080 DNAH11Q96DT5 4516 aa7.33□□□□□ -1.24
USP11-206ENST00000469080 IGLV7-43P04211 117 aa7.33□□□□□ -1.24
USP11-206ENST00000469080 MMP24-AS1A0A0U1RRL7 71 aa7.32□□□□□ -1.24
USP11-206ENST00000469080 KRTAP21-3Q3LHN1 58 aa7.31□□□□□ -1.24
USP11-206ENST00000469080 FRAS1Q86XX4 4008 aa7.3□□□□□ -1.24
USP11-206ENST00000469080 ACYP2P14621 99 aa7.3□□□□□ -1.24
USP11-206ENST00000469080 A0A087X002 238 aa7.29□□□□□ -1.24
USP11-206ENST00000469080 NOTCH2NLQ7Z3S9 236 aa7.29□□□□□ -1.24
USP11-206ENST00000469080 TP53AIP1Q9HCN2 124 aa7.29□□□□□ -1.24
USP11-206ENST00000469080 CRIPTQ9P021 101 aa7.26□□□□□ -1.25
USP11-206ENST00000469080 VPS13DQ5THJ4 4388 aa7.25□□□□□ -1.25
USP11-206ENST00000469080 KRTAP25-1Q3LHN0 102 aa7.25□□□□□ -1.25
USP11-206ENST00000469080 LINC00472Q9H8W2 130 aa7.25□□□□□ -1.25
USP11-206ENST00000469080 DNAH6Q9C0G6 4158 aa7.23□□□□□ -1.25
USP11-206ENST00000469080 P0C880 135 aa7.22□□□□□ -1.25
USP11-206ENST00000469080 TYMSOSQ8TAI1 123 aa7.22□□□□□ -1.25
USP11-206ENST00000469080 C8orf17Q9NRJ1 99 aa7.22□□□□□ -1.25
USP11-206ENST00000469080 IGKV2D-30A0A075B6S6 120 aa7.21□□□□□ -1.26
USP11-206ENST00000469080 IGKV2-30P06310 120 aa7.21□□□□□ -1.26
USP11-206ENST00000469080 DNAH2Q9P225 4427 aa7.2□□□□□ -1.26
USP11-206ENST00000469080 KRTAP13-1Q8IUC0 172 aa7.19□□□□□ -1.26
USP11-206ENST00000469080 C9orf92A6NGG3 77 aa7.19□□□□□ -1.26
USP11-206ENST00000469080 A0A1B0GVX0 72 aa7.18□□□□□ -1.26
USP11-206ENST00000469080 SPRR1BP22528 89 aa7.17□□□□□ -1.26
USP11-206ENST00000469080 HYDINQ4G0P3 5121 aa7.17□□□□□ -1.26
USP11-206ENST00000469080 DNAH8Q96JB1 4490 aa7.16□□□□□ -1.26
USP11-206ENST00000469080 A8MUU9 505 aa7.16□□□□□ -1.26
USP11-206ENST00000469080 DYNC2H1Q8NCM8 4307 aaKnown RBP7.16□□□□□ -1.26
USP11-206ENST00000469080 SPINK1P00995 79 aa7.15□□□□□ -1.27
USP11-206ENST00000469080 SPINT4Q6UDR6 99 aa7.15□□□□□ -1.27
USP11-206ENST00000469080 MRPL34Q9BQ48 92 aaKnown RBP7.15□□□□□ -1.27
USP11-206ENST00000469080 DNAH17Q9UFH2 4485 aa7.14□□□□□ -1.27
USP11-206ENST00000469080 NDUFAF8A1L188 74 aa7.14□□□□□ -1.27
USP11-206ENST00000469080 SSBP3-AS1Q7Z2R9 100 aa7.13□□□□□ -1.27
USP11-206ENST00000469080 Q96NJ1 140 aa7.13□□□□□ -1.27
USP11-206ENST00000469080 FAT1Q14517 4588 aa7.11□□□□□ -1.27
USP11-206ENST00000469080 KRTAP16-1A8MUX0 517 aa7.11□□□□□ -1.27
USP11-206ENST00000469080 LRP1BQ9NZR2 4599 aa7.11□□□□□ -1.27
USP11-206ENST00000469080 LINC00483Q53H64 154 aa7.11□□□□□ -1.27
USP11-206ENST00000469080 KRTAP13-2Q52LG2 175 aa7.1□□□□□ -1.27
USP11-206ENST00000469080 DMAC1Q96GE9 116 aa7.1□□□□□ -1.27
USP11-206ENST00000469080 Q5W150 140 aa7.08□□□□□ -1.28
USP11-206ENST00000469080 HECTD4Q9Y4D8 3996 aa7.08□□□□□ -1.28
USP11-206ENST00000469080 PKHD1P08F94 4074 aa7.06□□□□□ -1.28
USP11-206ENST00000469080 LINC00304Q8N9R0 145 aa7.04□□□□□ -1.28
USP11-206ENST00000469080 KMT2CQ8NEZ4 4911 aaKnown RBP7.04□□□□□ -1.28
USP11-206ENST00000469080 DNAH5Q8TE73 4624 aa7.02□□□□□ -1.29
USP11-206ENST00000469080 SACSQ9NZJ4 4579 aa7.01□□□□□ -1.29
USP11-206ENST00000469080 C20orf166-AS1Q96NR2 134 aa7□□□□□ -1.29
USP11-206ENST00000469080 Q8N1X5 172 aa6.99□□□□□ -1.29
USP11-206ENST00000469080 VPS13BQ7Z7G8 4022 aa6.96□□□□□ -1.3
USP11-206ENST00000469080 FAM229AH3BQW9 127 aa6.93□□□□□ -1.3
USP11-206ENST00000469080 KRTAP1-4P0C5Y4 121 aa6.92□□□□□ -1.3
USP11-206ENST00000469080 Q6ZSA8 131 aa6.91□□□□□ -1.3
USP11-206ENST00000469080 K7ERS5 55 aa6.89□□□□□ -1.31
USP11-206ENST00000469080 MYCBP2O75592 4640 aa6.89□□□□□ -1.31
USP11-206ENST00000469080 FAT2Q9NYQ8 4349 aa6.89□□□□□ -1.31
USP11-206ENST00000469080 DYNC1H1Q14204 4646 aaKnown RBP6.88□□□□□ -1.31
USP11-206ENST00000469080 H0YAA0 97 aa6.88□□□□□ -1.31
USP11-206ENST00000469080 LUZP6Q538Z0 58 aa6.87□□□□□ -1.31
USP11-206ENST00000469080 ALMS1Q8TCU4 4167 aa6.86□□□□□ -1.31
USP11-206ENST00000469080 KRTAP13-3Q3SY46 172 aa6.84□□□□□ -1.31
USP11-206ENST00000469080 Q5VSD8 79 aa6.84□□□□□ -1.32
USP11-206ENST00000469080 RYR3Q15413 4870 aa6.82□□□□□ -1.32
USP11-206ENST00000469080 RYR2Q92736 4967 aa6.82□□□□□ -1.32
USP11-206ENST00000469080 PKD1P98161 4303 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms