RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 ATXN8Q156A1 80 aa-0.51□□□□□ -2.49
SMC4-208ENST00000467468 KRTAP19-6Q3LI70 58 aa-0.51□□□□□ -2.49
SMC4-208ENST00000467468 DUOX2Q9NRD8 1548 aa-0.51□□□□□ -2.49
SMC4-208ENST00000467468 INO80Q9ULG1 1556 aaPredicted RBP-0.51□□□□□ -2.49
SMC4-208ENST00000467468 NRAPQ86VF7 1730 aa-0.52□□□□□ -2.49
SMC4-208ENST00000467468 KIAA0586Q9BVV6 1533 aa-0.52□□□□□ -2.49
SMC4-208ENST00000467468 ANKRD11Q6UB99 2663 aaPredicted RBP-0.53□□□□□ -2.49
SMC4-208ENST00000467468 MT1AP04731 61 aa-0.53□□□□□ -2.49
SMC4-208ENST00000467468 HILPDAQ9Y5L2 63 aa-0.53□□□□□ -2.49
SMC4-208ENST00000467468 WDR87Q6ZQQ6 2873 aa-0.53□□□□□ -2.49
SMC4-208ENST00000467468 MXRA5Q9NR99 2828 aa-0.53□□□□□ -2.49
SMC4-208ENST00000467468 NHSQ6T4R5 1651 aa-0.53□□□□□ -2.49
SMC4-208ENST00000467468 GCN1Q92616 2671 aaKnown RBP-0.54□□□□□ -2.5
SMC4-208ENST00000467468 PKHD1L1Q86WI1 4243 aa-0.55□□□□□ -2.5
SMC4-208ENST00000467468 VPS13BQ7Z7G8 4022 aa-0.55□□□□□ -2.5
SMC4-208ENST00000467468 COL12A1Q99715 3063 aa-0.55□□□□□ -2.5
SMC4-208ENST00000467468 FAM186AA6NE01 2351 aa-0.55□□□□□ -2.5
SMC4-208ENST00000467468 CUBNO60494 3623 aa-0.56□□□□□ -2.5
SMC4-208ENST00000467468 DEFB114Q30KQ6 69 aa-0.56□□□□□ -2.5
SMC4-208ENST00000467468 DNHD1Q96M86 4753 aa-0.56□□□□□ -2.5
SMC4-208ENST00000467468 ITPR2Q14571 2701 aa-0.56□□□□□ -2.5
SMC4-208ENST00000467468 ACACBO00763 2458 aa-0.56□□□□□ -2.5
SMC4-208ENST00000467468 PKD1L2Q7Z442 2459 aa-0.57□□□□□ -2.5
SMC4-208ENST00000467468 ASXL1Q8IXJ9 1541 aa-0.57□□□□□ -2.5
SMC4-208ENST00000467468 SPRR2FQ96RM1 72 aa-0.57□□□□□ -2.5
SMC4-208ENST00000467468 S4R3F8 94 aa-0.57□□□□□ -2.5
SMC4-208ENST00000467468 BIRC6Q9NR09 4857 aa-0.57□□□□□ -2.5
SMC4-208ENST00000467468 ABCA9Q8IUA7 1624 aa-0.57□□□□□ -2.5
SMC4-208ENST00000467468 ANK3Q12955 4377 aaKnown RBP-0.57□□□□□ -2.5
SMC4-208ENST00000467468 DEFB106AQ8N104 65 aa-0.58□□□□□ -2.5
SMC4-208ENST00000467468 DNAH6Q9C0G6 4158 aa-0.58□□□□□ -2.5
SMC4-208ENST00000467468 MTORP42345 2549 aa-0.58□□□□□ -2.5
SMC4-208ENST00000467468 MT1HL1P0DM35 61 aa-0.59□□□□□ -2.5
SMC4-208ENST00000467468 LRRK2Q5S007 2527 aa-0.6□□□□□ -2.5
SMC4-208ENST00000467468 GNG13Q9P2W3 67 aa-0.6□□□□□ -2.51
SMC4-208ENST00000467468 LAMA1P25391 3075 aa-0.6□□□□□ -2.51
SMC4-208ENST00000467468 ITSN2Q9NZM3 1697 aa-0.6□□□□□ -2.51
SMC4-208ENST00000467468 ITPR1Q14643 2758 aa-0.6□□□□□ -2.51
SMC4-208ENST00000467468 APOBP04114 4563 aaKnown RBP-0.6□□□□□ -2.51
SMC4-208ENST00000467468 ACACAQ13085 2346 aa-0.61□□□□□ -2.51
SMC4-208ENST00000467468 WT1-ASQ06250 92 aa-0.61□□□□□ -2.51
SMC4-208ENST00000467468 MINOS1Q5TGZ0 78 aa-0.62□□□□□ -2.51
SMC4-208ENST00000467468 MYO9AB2RTY4 2548 aa-0.62□□□□□ -2.51
SMC4-208ENST00000467468 SPG11Q96JI7 2443 aa-0.63□□□□□ -2.51
SMC4-208ENST00000467468 RPS27P42677 84 aaKnown RBP-0.63□□□□□ -2.51
SMC4-208ENST00000467468 RPS27LQ71UM5 84 aaKnown RBP-0.63□□□□□ -2.51
SMC4-208ENST00000467468 C3P01024 1663 aa-0.63□□□□□ -2.51
SMC4-208ENST00000467468 NBPF19A0A087WUL8 3843 aa-0.63□□□□□ -2.51
SMC4-208ENST00000467468 AKAP9Q99996 3911 aa-0.63□□□□□ -2.51
SMC4-208ENST00000467468 ABCC6O95255 1503 aa-0.64□□□□□ -2.51
SMC4-208ENST00000467468 DMXL1Q9Y485 3027 aa-0.64□□□□□ -2.51
SMC4-208ENST00000467468 ZZEF1O43149 2961 aa-0.65□□□□□ -2.51
SMC4-208ENST00000467468 SACSQ9NZJ4 4579 aa-0.65□□□□□ -2.51
SMC4-208ENST00000467468 MT1BP07438 61 aa-0.65□□□□□ -2.51
SMC4-208ENST00000467468 DNAH3Q8TD57 4116 aa-0.66□□□□□ -2.51
SMC4-208ENST00000467468 DNMBPQ6XZF7 1577 aa-0.66□□□□□ -2.51
SMC4-208ENST00000467468 TEX15Q9BXT5 2789 aa-0.66□□□□□ -2.51
SMC4-208ENST00000467468 CFAP46Q8IYW2 2715 aa-0.66□□□□□ -2.52
SMC4-208ENST00000467468 CEP295Q9C0D2 2601 aa-0.66□□□□□ -2.52
SMC4-208ENST00000467468 TLN1Q9Y490 2541 aaKnown RBP-0.66□□□□□ -2.52
SMC4-208ENST00000467468 TACC2O95359 2948 aa-0.67□□□□□ -2.52
SMC4-208ENST00000467468 ANKRD36CQ5JPF3 1778 aa-0.67□□□□□ -2.52
SMC4-208ENST00000467468 HTTP42858 3142 aa-0.67□□□□□ -2.52
SMC4-208ENST00000467468 MYO15AQ9UKN7 3530 aa-0.67□□□□□ -2.52
SMC4-208ENST00000467468 KIF1AQ12756 1690 aa-0.67□□□□□ -2.52
SMC4-208ENST00000467468 A0A0C4DFX4 3053 aa-0.67□□□□□ -2.52
SMC4-208ENST00000467468 VPS13DQ5THJ4 4388 aa-0.67□□□□□ -2.52
SMC4-208ENST00000467468 LAMA3Q16787 3333 aa-0.67□□□□□ -2.52
SMC4-208ENST00000467468 SRCAPQ6ZRS2 3230 aa-0.68□□□□□ -2.52
SMC4-208ENST00000467468 BPTFQ12830 3046 aa-0.68□□□□□ -2.52
SMC4-208ENST00000467468 DMXL2Q8TDJ6 3036 aa-0.68□□□□□ -2.52
SMC4-208ENST00000467468 C6orf48Q9UBA6 75 aa-0.69□□□□□ -2.52
SMC4-208ENST00000467468 EYSQ5T1H1 3165 aa-0.69□□□□□ -2.52
SMC4-208ENST00000467468 TLN2Q9Y4G6 2542 aa-0.7□□□□□ -2.52
SMC4-208ENST00000467468 PLECQ15149 4684 aaKnown RBP-0.7□□□□□ -2.52
SMC4-208ENST00000467468 LINC01549A6NIU2 74 aa-0.7□□□□□ -2.52
SMC4-208ENST00000467468 MT1HP80294 61 aa-0.7□□□□□ -2.52
SMC4-208ENST00000467468 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.7□□□□□ -2.52
SMC4-208ENST00000467468 SPTAN1Q13813 2472 aaKnown RBP-0.71□□□□□ -2.52
SMC4-208ENST00000467468 TOGARAM1Q9Y4F4 1720 aa-0.71□□□□□ -2.52
SMC4-208ENST00000467468 MROH1Q8NDA8 1641 aa-0.71□□□□□ -2.52
SMC4-208ENST00000467468 DNAH11Q96DT5 4516 aa-0.72□□□□□ -2.52
SMC4-208ENST00000467468 UTP20O75691 2785 aaKnown RBP-0.72□□□□□ -2.52
SMC4-208ENST00000467468 MUC17Q685J3 4493 aa-0.72□□□□□ -2.52
SMC4-208ENST00000467468 EFCAB5A4FU69 1503 aa-0.72□□□□□ -2.52
SMC4-208ENST00000467468 KALRNO60229 2985 aa-0.72□□□□□ -2.52
SMC4-208ENST00000467468 MADDQ8WXG6 1647 aa-0.73□□□□□ -2.53
SMC4-208ENST00000467468 MT1XP80297 61 aa-0.73□□□□□ -2.53
SMC4-208ENST00000467468 KRTAP8-1Q8IUC2 63 aa-0.73□□□□□ -2.53
SMC4-208ENST00000467468 MT1MQ8N339 61 aa-0.73□□□□□ -2.53
SMC4-208ENST00000467468 CHD7Q9P2D1 2997 aa-0.73□□□□□ -2.53
SMC4-208ENST00000467468 CENPEQ02224 2701 aa-0.74□□□□□ -2.53
SMC4-208ENST00000467468 K7EMI3 77 aa-0.74□□□□□ -2.53
SMC4-208ENST00000467468 MT2AP02795 61 aa-0.74□□□□□ -2.53
SMC4-208ENST00000467468 NCBP2-AS2Q69YL0 99 aa-0.74□□□□□ -2.53
SMC4-208ENST00000467468 CLASP1Q7Z460 1538 aa-0.74□□□□□ -2.53
SMC4-208ENST00000467468 H3BUA1 57 aa-0.75□□□□□ -2.53
SMC4-208ENST00000467468 FCER1GP30273 86 aa-0.75□□□□□ -2.53
SMC4-208ENST00000467468 NBEAQ8NFP9 2946 aa-0.75□□□□□ -2.53
SMC4-208ENST00000467468 DNAH2Q9P225 4427 aa-0.75□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms