RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 KRTAP1-5Q9BYS1 174 aa5.79□□□□□ -1.48
LINC01940-201ENST00000455228 IGLV9-49A0A0B4J1Y8 123 aa5.78□□□□□ -1.48
LINC01940-201ENST00000455228 SPRR1BP22528 89 aa5.78□□□□□ -1.48
LINC01940-201ENST00000455228 A8MUU9 505 aa5.78□□□□□ -1.48
LINC01940-201ENST00000455228 ANK2Q01484 3957 aa5.77□□□□□ -1.49
LINC01940-201ENST00000455228 MMP24-AS1A0A0U1RRL7 71 aa5.77□□□□□ -1.49
LINC01940-201ENST00000455228 SEC61BP60468 96 aaKnown RBP5.75□□□□□ -1.49
LINC01940-201ENST00000455228 DMAC1Q96GE9 116 aa5.75□□□□□ -1.49
LINC01940-201ENST00000455228 C20orf166-AS1Q96NR2 134 aa5.75□□□□□ -1.49
LINC01940-201ENST00000455228 STAB2Q8WWQ8 2551 aa5.74□□□□□ -1.49
LINC01940-201ENST00000455228 KRTAP15-1Q3LI76 137 aa5.73□□□□□ -1.49
LINC01940-201ENST00000455228 K7EIL1 84 aa5.72□□□□□ -1.49
LINC01940-201ENST00000455228 C8orf17Q9NRJ1 99 aa5.71□□□□□ -1.5
LINC01940-201ENST00000455228 A0A1B0GU69 56 aa5.7□□□□□ -1.5
LINC01940-201ENST00000455228 KRTAP13-3Q3SY46 172 aa5.69□□□□□ -1.5
LINC01940-201ENST00000455228 TGP01266 2768 aa5.68□□□□□ -1.5
LINC01940-201ENST00000455228 Q5W150 140 aa5.68□□□□□ -1.5
LINC01940-201ENST00000455228 ACYP2P14621 99 aa5.68□□□□□ -1.5
LINC01940-201ENST00000455228 TENM2Q9NT68 2774 aa5.68□□□□□ -1.5
LINC01940-201ENST00000455228 PANO1I0J062 215 aa5.68□□□□□ -1.5
LINC01940-201ENST00000455228 A0A1B0GVX0 72 aa5.67□□□□□ -1.5
LINC01940-201ENST00000455228 NUPR2A6NF83 97 aa5.67□□□□□ -1.5
LINC01940-201ENST00000455228 IGLV7-43P04211 117 aa5.67□□□□□ -1.5
LINC01940-201ENST00000455228 Q96NJ1 140 aa5.67□□□□□ -1.5
LINC01940-201ENST00000455228 CSMD3Q7Z407 3707 aa5.67□□□□□ -1.5
LINC01940-201ENST00000455228 COL7A1Q02388 2944 aa5.66□□□□□ -1.5
LINC01940-201ENST00000455228 MRPL34Q9BQ48 92 aaKnown RBP5.66□□□□□ -1.5
LINC01940-201ENST00000455228 KRTAP13-1Q8IUC0 172 aa5.66□□□□□ -1.5
LINC01940-201ENST00000455228 APLNQ9ULZ1 77 aa5.66□□□□□ -1.5
LINC01940-201ENST00000455228 A0A087WTM6 91 aa5.65□□□□□ -1.5
LINC01940-201ENST00000455228 LINC00304Q8N9R0 145 aa5.65□□□□□ -1.5
LINC01940-201ENST00000455228 DNAH10Q8IVF4 4471 aa5.65□□□□□ -1.5
LINC01940-201ENST00000455228 SPINK6Q6UWN8 80 aa5.65□□□□□ -1.51
LINC01940-201ENST00000455228 DNAH1Q9P2D7 4330 aa5.64□□□□□ -1.51
LINC01940-201ENST00000455228 NBDYA0A0U1RRE5 68 aa5.64□□□□□ -1.51
LINC01940-201ENST00000455228 ANAPC11Q9NYG5 84 aa5.63□□□□□ -1.51
LINC01940-201ENST00000455228 SPACA4Q8TDM5 124 aa5.61□□□□□ -1.51
LINC01940-201ENST00000455228 WWC2-AS2Q96NR7 200 aa5.6□□□□□ -1.51
LINC01940-201ENST00000455228 HUWE1Q7Z6Z7 4374 aaKnown RBP5.59□□□□□ -1.51
LINC01940-201ENST00000455228 PSORS1C2Q9UIG4 136 aa5.59□□□□□ -1.51
LINC01940-201ENST00000455228 LYSTQ99698 3801 aa5.59□□□□□ -1.51
LINC01940-201ENST00000455228 CMYA5Q8N3K9 4069 aa5.58□□□□□ -1.52
LINC01940-201ENST00000455228 NDUFAF8A1L188 74 aa5.57□□□□□ -1.52
LINC01940-201ENST00000455228 CIRBP-AS1Q8TBR5 109 aa5.57□□□□□ -1.52
LINC01940-201ENST00000455228 LUZP6Q538Z0 58 aa5.57□□□□□ -1.52
LINC01940-201ENST00000455228 Q6ZRN7 208 aaPredicted RBP5.56□□□□□ -1.52
LINC01940-201ENST00000455228 DNAH9Q9NYC9 4486 aa5.55□□□□□ -1.52
LINC01940-201ENST00000455228 DNAH3Q8TD57 4116 aa5.55□□□□□ -1.52
LINC01940-201ENST00000455228 LY6G6CO95867 125 aa5.49□□□□□ -1.53
LINC01940-201ENST00000455228 H0YAA0 97 aa5.48□□□□□ -1.53
LINC01940-201ENST00000455228 K7ERS5 55 aa5.48□□□□□ -1.53
LINC01940-201ENST00000455228 DNHD1Q96M86 4753 aa5.47□□□□□ -1.53
LINC01940-201ENST00000455228 FAM229AH3BQW9 127 aa5.47□□□□□ -1.53
LINC01940-201ENST00000455228 SSBP3-AS1Q7Z2R9 100 aa5.45□□□□□ -1.54
LINC01940-201ENST00000455228 DNAH7Q8WXX0 4024 aa5.44□□□□□ -1.54
LINC01940-201ENST00000455228 IGKV2D-30A0A075B6S6 120 aa5.42□□□□□ -1.54
LINC01940-201ENST00000455228 IGKV2-30P06310 120 aa5.42□□□□□ -1.54
LINC01940-201ENST00000455228 Q6ZSA8 131 aa5.42□□□□□ -1.54
LINC01940-201ENST00000455228 PLECQ15149 4684 aaKnown RBP5.4□□□□□ -1.54
LINC01940-201ENST00000455228 FLG2Q5D862 2391 aaPredicted RBP5.38□□□□□ -1.55
LINC01940-201ENST00000455228 FRAS1Q86XX4 4008 aa5.38□□□□□ -1.55
LINC01940-201ENST00000455228 SPINT4Q6UDR6 99 aa5.38□□□□□ -1.55
LINC01940-201ENST00000455228 MEGF8Q7Z7M0 2845 aa5.37□□□□□ -1.55
LINC01940-201ENST00000455228 DNAH8Q96JB1 4490 aa5.36□□□□□ -1.55
LINC01940-201ENST00000455228 TPRXLQ17RH7 258 aa5.36□□□□□ -1.55
LINC01940-201ENST00000455228 FBN3Q75N90 2809 aa5.36□□□□□ -1.55
LINC01940-201ENST00000455228 KRTAP21-3Q3LHN1 58 aa5.36□□□□□ -1.55
LINC01940-201ENST00000455228 CRIPTQ9P021 101 aa5.35□□□□□ -1.55
LINC01940-201ENST00000455228 SPINK1P00995 79 aa5.34□□□□□ -1.55
LINC01940-201ENST00000455228 KRTAP13-2Q52LG2 175 aa5.32□□□□□ -1.56
LINC01940-201ENST00000455228 DYNC2H1Q8NCM8 4307 aaKnown RBP5.32□□□□□ -1.56
LINC01940-201ENST00000455228 HECTD4Q9Y4D8 3996 aa5.3□□□□□ -1.56
LINC01940-201ENST00000455228 STARD9Q9P2P6 4700 aa5.29□□□□□ -1.56
LINC01940-201ENST00000455228 KRTAP10-2P60368 255 aa5.29□□□□□ -1.56
LINC01940-201ENST00000455228 VPS13DQ5THJ4 4388 aa5.28□□□□□ -1.56
LINC01940-201ENST00000455228 Q8N1X5 172 aa5.28□□□□□ -1.56
LINC01940-201ENST00000455228 DNAH17Q9UFH2 4485 aa5.27□□□□□ -1.57
LINC01940-201ENST00000455228 KMT2AQ03164 3969 aa5.26□□□□□ -1.57
LINC01940-201ENST00000455228 TYMSOSQ8TAI1 123 aa5.25□□□□□ -1.57
LINC01940-201ENST00000455228 H1FX-AS1Q4G0G2 97 aa5.24□□□□□ -1.57
LINC01940-201ENST00000455228 CAMK2N1Q7Z7J9 78 aa5.23□□□□□ -1.57
LINC01940-201ENST00000455228 KRTAP10-1P60331 282 aa5.22□□□□□ -1.57
LINC01940-201ENST00000455228 COX6B2Q6YFQ2 88 aa5.22□□□□□ -1.57
LINC01940-201ENST00000455228 DNAH2Q9P225 4427 aa5.22□□□□□ -1.57
LINC01940-201ENST00000455228 KRTAP1-4P0C5Y4 121 aa5.21□□□□□ -1.57
LINC01940-201ENST00000455228 A0A1B0GU33 70 aa5.21□□□□□ -1.58
LINC01940-201ENST00000455228 DNAH6Q9C0G6 4158 aa5.17□□□□□ -1.58
LINC01940-201ENST00000455228 PRKDCP78527 4128 aaKnown RBP5.16□□□□□ -1.58
LINC01940-201ENST00000455228 DNAH11Q96DT5 4516 aa5.16□□□□□ -1.58
LINC01940-201ENST00000455228 C9orf92A6NGG3 77 aa5.14□□□□□ -1.59
LINC01940-201ENST00000455228 LRP1BQ9NZR2 4599 aa5.11□□□□□ -1.59
LINC01940-201ENST00000455228 DNAH5Q8TE73 4624 aa5.09□□□□□ -1.59
LINC01940-201ENST00000455228 RPS29P62273 56 aaKnown RBP5.07□□□□□ -1.6
LINC01940-201ENST00000455228 KRTAP3-2Q9BYR7 98 aa5.06□□□□□ -1.6
LINC01940-201ENST00000455228 SMR3BP02814 79 aaPredicted RBP5.05□□□□□ -1.6
LINC01940-201ENST00000455228 RPL37P61927 97 aaKnown RBP5.05□□□□□ -1.6
LINC01940-201ENST00000455228 XP32Q5T750 250 aa5.05□□□□□ -1.6
LINC01940-201ENST00000455228 VPS13BQ7Z7G8 4022 aa5.05□□□□□ -1.6
LINC01940-201ENST00000455228 KRTAP3-1Q9BYR8 98 aa5.03□□□□□ -1.6
LINC01940-201ENST00000455228 C10orf95Q9H7T3 257 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms