RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 ATP10BO94823 1461 aa-1.37□□□□□ -2.63
SNHG3-203ENST00000447507 UNC13AQ9UPW8 1703 aa-1.37□□□□□ -2.63
SNHG3-203ENST00000447507 NDUFA4O00483 81 aa-1.37□□□□□ -2.63
SNHG3-203ENST00000447507 DEFB4AO15263 64 aa-1.37□□□□□ -2.63
SNHG3-203ENST00000447507 RPS27P42677 84 aaKnown RBP-1.37□□□□□ -2.63
SNHG3-203ENST00000447507 RPS27LQ71UM5 84 aaKnown RBP-1.37□□□□□ -2.63
SNHG3-203ENST00000447507 KIF1AQ12756 1690 aa-1.37□□□□□ -2.63
SNHG3-203ENST00000447507 ARFGEF2Q9Y6D5 1785 aa-1.37□□□□□ -2.63
SNHG3-203ENST00000447507 MYO3AQ8NEV4 1616 aa-1.37□□□□□ -2.63
SNHG3-203ENST00000447507 FREM2Q5SZK8 3169 aa-1.37□□□□□ -2.63
SNHG3-203ENST00000447507 FYCO1Q9BQS8 1478 aa-1.37□□□□□ -2.63
SNHG3-203ENST00000447507 ITSN1Q15811 1721 aa-1.37□□□□□ -2.63
SNHG3-203ENST00000447507 PRUNE2Q8WUY3 3088 aa-1.38□□□□□ -2.63
SNHG3-203ENST00000447507 MYMXA0A1B0GTQ4 84 aa-1.38□□□□□ -2.63
SNHG3-203ENST00000447507 C20orf202A1L168 122 aa-1.38□□□□□ -2.63
SNHG3-203ENST00000447507 PEA15Q15121 130 aa-1.38□□□□□ -2.63
SNHG3-203ENST00000447507 NCBP2-AS2Q69YL0 99 aa-1.38□□□□□ -2.63
SNHG3-203ENST00000447507 C20orf78Q9BR46 151 aa-1.38□□□□□ -2.63
SNHG3-203ENST00000447507 C2orf88Q9BSF0 95 aa-1.38□□□□□ -2.63
SNHG3-203ENST00000447507 ZC3H13Q5T200 1668 aaKnown RBP-1.39□□□□□ -2.63
SNHG3-203ENST00000447507 KIAA0586Q9BVV6 1533 aa-1.39□□□□□ -2.63
SNHG3-203ENST00000447507 VPS13CQ709C8 3753 aa-1.39□□□□□ -2.63
SNHG3-203ENST00000447507 CCNB3Q8WWL7 1395 aa-1.39□□□□□ -2.63
SNHG3-203ENST00000447507 SPEGQ15772 3267 aa-1.39□□□□□ -2.63
SNHG3-203ENST00000447507 LOC400499M0QZD8 3231 aa-1.4□□□□□ -2.63
SNHG3-203ENST00000447507 UMAD1C9J7I0 102 aa-1.4□□□□□ -2.63
SNHG3-203ENST00000447507 NDUFB1O75438 58 aa-1.4□□□□□ -2.63
SNHG3-203ENST00000447507 IFI27P40305 119 aaPredicted RBP-1.4□□□□□ -2.63
SNHG3-203ENST00000447507 CRIP1P50238 77 aa-1.4□□□□□ -2.63
SNHG3-203ENST00000447507 TJP1Q07157 1748 aa-1.4□□□□□ -2.63
SNHG3-203ENST00000447507 RICTORQ6R327 1708 aa-1.4□□□□□ -2.63
SNHG3-203ENST00000447507 SMARCA2P51531 1590 aa-1.41□□□□□ -2.63
SNHG3-203ENST00000447507 LINC01546A6NGU7 62 aa-1.41□□□□□ -2.64
SNHG3-203ENST00000447507 SFTA3P0C7M3 94 aa-1.41□□□□□ -2.64
SNHG3-203ENST00000447507 CRYBG3Q68DQ2 2970 aa-1.41□□□□□ -2.64
SNHG3-203ENST00000447507 DPY30Q9C005 99 aa-1.41□□□□□ -2.64
SNHG3-203ENST00000447507 LRRIQ1Q96JM4 1722 aa-1.42□□□□□ -2.64
SNHG3-203ENST00000447507 DEFB131BA0A096LNP1 70 aa-1.42□□□□□ -2.64
SNHG3-203ENST00000447507 CEBPZOSA8MTT3 80 aa-1.42□□□□□ -2.64
SNHG3-203ENST00000447507 LINC00032P0C843 101 aa-1.42□□□□□ -2.64
SNHG3-203ENST00000447507 SMIM11AP58511 58 aa-1.42□□□□□ -2.64
SNHG3-203ENST00000447507 PIK3C2BO00750 1634 aa-1.42□□□□□ -2.64
SNHG3-203ENST00000447507 URB2Q14146 1524 aaKnown RBP-1.42□□□□□ -2.64
SNHG3-203ENST00000447507 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.43□□□□□ -2.64
SNHG3-203ENST00000447507 EFCAB10A6NFE3 127 aa-1.43□□□□□ -2.64
SNHG3-203ENST00000447507 NREPQ16612 68 aa-1.43□□□□□ -2.64
SNHG3-203ENST00000447507 MINOS1Q5TGZ0 78 aa-1.43□□□□□ -2.64
SNHG3-203ENST00000447507 C14orf144Q96I85 54 aa-1.43□□□□□ -2.64
SNHG3-203ENST00000447507 NOP10Q9NPE3 64 aaKnown RBP-1.43□□□□□ -2.64
SNHG3-203ENST00000447507 CEP162Q5TB80 1403 aa-1.43□□□□□ -2.64
SNHG3-203ENST00000447507 NRAPQ86VF7 1730 aa-1.43□□□□□ -2.64
SNHG3-203ENST00000447507 NCMAPQ5T1S8 102 aa-1.44□□□□□ -2.64
SNHG3-203ENST00000447507 RABAC1Q9UI14 185 aa-1.44□□□□□ -2.64
SNHG3-203ENST00000447507 RNF17Q9BXT8 1623 aaKnown RBP-1.44□□□□□ -2.64
SNHG3-203ENST00000447507 A0A1B0GUL6 1792 aa-1.44□□□□□ -2.64
SNHG3-203ENST00000447507 DCHS1Q96JQ0 3298 aa-1.45□□□□□ -2.64
SNHG3-203ENST00000447507 THOC2Q8NI27 1593 aaKnown RBP-1.45□□□□□ -2.64
SNHG3-203ENST00000447507 CNTLNQ9NXG0 1405 aa-1.45□□□□□ -2.64
SNHG3-203ENST00000447507 MT1FP04733 61 aa-1.45□□□□□ -2.64
SNHG3-203ENST00000447507 FCER1GP30273 86 aa-1.45□□□□□ -2.64
SNHG3-203ENST00000447507 BVES-AS1Q5T3Y7 98 aa-1.45□□□□□ -2.64
SNHG3-203ENST00000447507 ACBD7Q8N6N7 88 aa-1.45□□□□□ -2.64
SNHG3-203ENST00000447507 CCDC88BA6NC98 1476 aa-1.45□□□□□ -2.64
SNHG3-203ENST00000447507 ERVK-7P63135 1459 aa-1.45□□□□□ -2.64
SNHG3-203ENST00000447507 ARHGAP35Q9NRY4 1499 aa-1.45□□□□□ -2.64
SNHG3-203ENST00000447507 ATP6V1G2-DDX39BF2Z307 99 aa-1.46□□□□□ -2.64
SNHG3-203ENST00000447507 RBP2P50120 134 aa-1.46□□□□□ -2.64
SNHG3-203ENST00000447507 SARNPP82979 210 aaKnown RBP-1.46□□□□□ -2.64
SNHG3-203ENST00000447507 CFAP43Q8NDM7 1665 aa-1.46□□□□□ -2.64
SNHG3-203ENST00000447507 ASXL1Q8IXJ9 1541 aa-1.46□□□□□ -2.64
SNHG3-203ENST00000447507 ANKRD26Q9UPS8 1709 aa-1.46□□□□□ -2.64
SNHG3-203ENST00000447507 A8MTW9 85 aa-1.47□□□□□ -2.64
SNHG3-203ENST00000447507 H3BUA1 57 aa-1.47□□□□□ -2.64
SNHG3-203ENST00000447507 M0QY20 66 aa-1.47□□□□□ -2.64
SNHG3-203ENST00000447507 MRPL33O75394 65 aaKnown RBP-1.47□□□□□ -2.64
SNHG3-203ENST00000447507 GYPAP02724 150 aa-1.47□□□□□ -2.64
SNHG3-203ENST00000447507 SPART-AS1P0CW21 52 aa-1.47□□□□□ -2.64
SNHG3-203ENST00000447507 LINC00643Q86TS7 51 aa-1.47□□□□□ -2.64
SNHG3-203ENST00000447507 C6orf48Q9UBA6 75 aa-1.47□□□□□ -2.64
SNHG3-203ENST00000447507 AKAP12Q02952 1782 aa-1.47□□□□□ -2.65
SNHG3-203ENST00000447507 MAP3K4Q9Y6R4 1608 aa-1.48□□□□□ -2.65
SNHG3-203ENST00000447507 M0QZ58 72 aa-1.48□□□□□ -2.65
SNHG3-203ENST00000447507 S100PP25815 95 aa-1.48□□□□□ -2.65
SNHG3-203ENST00000447507 SNRPFP62306 86 aaKnown RBP-1.48□□□□□ -2.65
SNHG3-203ENST00000447507 KCNQ1DNQ9H478 68 aa-1.48□□□□□ -2.65
SNHG3-203ENST00000447507 INO80Q9ULG1 1556 aaPredicted RBP-1.48□□□□□ -2.65
SNHG3-203ENST00000447507 HFM1A2PYH4 1435 aa-1.49□□□□□ -2.65
SNHG3-203ENST00000447507 HMGA1P17096 107 aaKnown RBP-1.49□□□□□ -2.65
SNHG3-203ENST00000447507 UBL5Q9BZL1 73 aa-1.49□□□□□ -2.65
SNHG3-203ENST00000447507 UNC80Q8N2C7 3258 aa-1.49□□□□□ -2.65
SNHG3-203ENST00000447507 CFAP54Q96N23 3096 aa-1.49□□□□□ -2.65
SNHG3-203ENST00000447507 WDFY3Q8IZQ1 3526 aa-1.5□□□□□ -2.65
SNHG3-203ENST00000447507 SNHG12Q9BXW3 62 aa-1.5□□□□□ -2.65
SNHG3-203ENST00000447507 PPLO60437 1756 aa-1.5□□□□□ -2.65
SNHG3-203ENST00000447507 MED14O60244 1454 aa-1.5□□□□□ -2.65
SNHG3-203ENST00000447507 KIF14Q15058 1648 aa-1.51□□□□□ -2.65
SNHG3-203ENST00000447507 EP400Q96L91 3159 aa-1.52□□□□□ -2.65
SNHG3-203ENST00000447507 A0A087WXM4 84 aa-1.52□□□□□ -2.65
SNHG3-203ENST00000447507 M0R143 59 aa-1.52□□□□□ -2.65
SNHG3-203ENST00000447507 SMIM13P0DJ93 91 aa-1.52□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms