RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 Q6ZQY7 126 aa6.14□□□□□ -1.43
SYNE2-206ENST00000441438 CSMD3Q7Z407 3707 aa6.14□□□□□ -1.43
SYNE2-206ENST00000441438 A0A0J9YWU9 116 aa6.14□□□□□ -1.43
SYNE2-206ENST00000441438 COX7BP24311 80 aa6.14□□□□□ -1.43
SYNE2-206ENST00000441438 TENM2Q9NT68 2774 aa6.13□□□□□ -1.43
SYNE2-206ENST00000441438 DNAH6Q9C0G6 4158 aa6.12□□□□□ -1.43
SYNE2-206ENST00000441438 LINC00304Q8N9R0 145 aa6.12□□□□□ -1.43
SYNE2-206ENST00000441438 PRO2289Q9P1D8 64 aa6.12□□□□□ -1.43
SYNE2-206ENST00000441438 K7EIL1 84 aa6.12□□□□□ -1.43
SYNE2-206ENST00000441438 KRTAP3-1Q9BYR8 98 aa6.12□□□□□ -1.43
SYNE2-206ENST00000441438 GVQW2A0A096LPI5 108 aaPredicted RBP6.12□□□□□ -1.43
SYNE2-206ENST00000441438 PRO0255Q9UI72 69 aa6.11□□□□□ -1.43
SYNE2-206ENST00000441438 A0A1B0GU69 56 aa6.11□□□□□ -1.43
SYNE2-206ENST00000441438 R4GN34 69 aa6.11□□□□□ -1.43
SYNE2-206ENST00000441438 PRKDCP78527 4128 aaKnown RBP6.1□□□□□ -1.43
SYNE2-206ENST00000441438 KRTAP10-11P60412 298 aa6.1□□□□□ -1.43
SYNE2-206ENST00000441438 Q8N9L7 120 aa6.08□□□□□ -1.44
SYNE2-206ENST00000441438 STAB2Q8WWQ8 2551 aa6.08□□□□□ -1.44
SYNE2-206ENST00000441438 LCE2BO14633 110 aa6.07□□□□□ -1.44
SYNE2-206ENST00000441438 UNQ6190/PRO20217Q6UXQ8 127 aa6.07□□□□□ -1.44
SYNE2-206ENST00000441438 DYNC2H1Q8NCM8 4307 aaKnown RBP6.05□□□□□ -1.44
SYNE2-206ENST00000441438 RPL37AP61513 92 aaKnown RBP6.05□□□□□ -1.44
SYNE2-206ENST00000441438 IGLV5-48A0A075B6I7 105 aa6.02□□□□□ -1.45
SYNE2-206ENST00000441438 WFDC10BQ8IUB3 73 aa6.02□□□□□ -1.45
SYNE2-206ENST00000441438 SPART-AS1P0CW21 52 aa6□□□□□ -1.45
SYNE2-206ENST00000441438 A0A0G2JQZ4 141 aa6□□□□□ -1.45
SYNE2-206ENST00000441438 DNAH9Q9NYC9 4486 aa6□□□□□ -1.45
SYNE2-206ENST00000441438 C6orf48Q9UBA6 75 aa6□□□□□ -1.45
SYNE2-206ENST00000441438 PSORS1C2Q9UIG4 136 aa6□□□□□ -1.45
SYNE2-206ENST00000441438 SPACA4Q8TDM5 124 aa5.99□□□□□ -1.45
SYNE2-206ENST00000441438 SRRM2Q9UQ35 2752 aaKnown RBP5.99□□□□□ -1.45
SYNE2-206ENST00000441438 LYSTQ99698 3801 aa5.99□□□□□ -1.45
SYNE2-206ENST00000441438 ALMS1Q8TCU4 4167 aa5.99□□□□□ -1.45
SYNE2-206ENST00000441438 H3BNG1 76 aa5.99□□□□□ -1.45
SYNE2-206ENST00000441438 TPRXLQ17RH7 258 aa5.98□□□□□ -1.45
SYNE2-206ENST00000441438 A0A1W2PNN7 141 aa5.97□□□□□ -1.45
SYNE2-206ENST00000441438 TGP01266 2768 aa5.97□□□□□ -1.45
SYNE2-206ENST00000441438 COL7A1Q02388 2944 aa5.97□□□□□ -1.45
SYNE2-206ENST00000441438 LELP1Q5T871 98 aa5.96□□□□□ -1.46
SYNE2-206ENST00000441438 IGKV2D-24A0A075B6R9 120 aa5.95□□□□□ -1.46
SYNE2-206ENST00000441438 DNAH1Q9P2D7 4330 aa5.92□□□□□ -1.46
SYNE2-206ENST00000441438 ACYP2P14621 99 aa5.92□□□□□ -1.46
SYNE2-206ENST00000441438 HRES1P13985 223 aa5.91□□□□□ -1.46
SYNE2-206ENST00000441438 LORP23490 312 aaPredicted RBP5.91□□□□□ -1.46
SYNE2-206ENST00000441438 DSCR10P59022 87 aa5.91□□□□□ -1.46
SYNE2-206ENST00000441438 SSBP3-AS1Q7Z2R9 100 aa5.9□□□□□ -1.46
SYNE2-206ENST00000441438 DEFB105AQ8NG35 78 aa5.89□□□□□ -1.47
SYNE2-206ENST00000441438 DEFB131BA0A096LNP1 70 aa5.89□□□□□ -1.47
SYNE2-206ENST00000441438 DNAH10Q8IVF4 4471 aa5.89□□□□□ -1.47
SYNE2-206ENST00000441438 KRTAP11-1Q8IUC1 163 aa5.88□□□□□ -1.47
SYNE2-206ENST00000441438 HUWE1Q7Z6Z7 4374 aaKnown RBP5.88□□□□□ -1.47
SYNE2-206ENST00000441438 DNAH7Q8WXX0 4024 aa5.88□□□□□ -1.47
SYNE2-206ENST00000441438 K7EQZ3 153 aa5.86□□□□□ -1.47
SYNE2-206ENST00000441438 Q6ZRX8 168 aa5.86□□□□□ -1.47
SYNE2-206ENST00000441438 SPRR1AP35321 89 aa5.86□□□□□ -1.47
SYNE2-206ENST00000441438 KRTAP29-1A8MX34 341 aaPredicted RBP5.81□□□□□ -1.48
SYNE2-206ENST00000441438 KMT2CQ8NEZ4 4911 aaKnown RBP5.8□□□□□ -1.48
SYNE2-206ENST00000441438 IGKV2-24A0A0C4DH68 120 aa5.79□□□□□ -1.48
SYNE2-206ENST00000441438 LINC01556Q5JQF7 62 aa5.76□□□□□ -1.49
SYNE2-206ENST00000441438 CRIPTQ9P021 101 aa5.76□□□□□ -1.49
SYNE2-206ENST00000441438 RYR3Q15413 4870 aa5.75□□□□□ -1.49
SYNE2-206ENST00000441438 SACSQ9NZJ4 4579 aa5.75□□□□□ -1.49
SYNE2-206ENST00000441438 IGFL1Q6UW32 110 aa5.74□□□□□ -1.49
SYNE2-206ENST00000441438 RYR2Q92736 4967 aa5.74□□□□□ -1.49
SYNE2-206ENST00000441438 DNAH17Q9UFH2 4485 aa5.73□□□□□ -1.49
SYNE2-206ENST00000441438 WFDC13Q8IUB5 93 aa5.72□□□□□ -1.49
SYNE2-206ENST00000441438 KRTAP1-5Q9BYS1 174 aa5.71□□□□□ -1.49
SYNE2-206ENST00000441438 APLNQ9ULZ1 77 aa5.71□□□□□ -1.49
SYNE2-206ENST00000441438 KRTAP10-8P60410 259 aa5.71□□□□□ -1.5
SYNE2-206ENST00000441438 PRLHP81277 87 aa5.71□□□□□ -1.5
SYNE2-206ENST00000441438 KRTAP7-1Q8IUC3 87 aa5.71□□□□□ -1.5
SYNE2-206ENST00000441438 STARD9Q9P2P6 4700 aa5.71□□□□□ -1.5
SYNE2-206ENST00000441438 C14orf177Q52M58 125 aa5.71□□□□□ -1.5
SYNE2-206ENST00000441438 A0A096LNI7 61 aa5.7□□□□□ -1.5
SYNE2-206ENST00000441438 LY6G6CO95867 125 aa5.7□□□□□ -1.5
SYNE2-206ENST00000441438 UBE2DNLQ8IWF7 75 aa5.68□□□□□ -1.5
SYNE2-206ENST00000441438 PLECQ15149 4684 aaKnown RBP5.68□□□□□ -1.5
SYNE2-206ENST00000441438 VPS13DQ5THJ4 4388 aa5.67□□□□□ -1.5
SYNE2-206ENST00000441438 SPRR1BP22528 89 aa5.66□□□□□ -1.5
SYNE2-206ENST00000441438 TP53AIP1Q9HCN2 124 aa5.66□□□□□ -1.5
SYNE2-206ENST00000441438 BIRC6Q9NR09 4857 aa5.64□□□□□ -1.51
SYNE2-206ENST00000441438 MMP24-AS1A0A0U1RRL7 71 aa5.63□□□□□ -1.51
SYNE2-206ENST00000441438 PCOTHQ58A44 107 aa5.62□□□□□ -1.51
SYNE2-206ENST00000441438 ANAPC11Q9NYG5 84 aa5.62□□□□□ -1.51
SYNE2-206ENST00000441438 FAT2Q9NYQ8 4349 aa5.61□□□□□ -1.51
SYNE2-206ENST00000441438 KMT2AQ03164 3969 aa5.59□□□□□ -1.51
SYNE2-206ENST00000441438 INE1O15225 51 aa5.59□□□□□ -1.51
SYNE2-206ENST00000441438 FRAS1Q86XX4 4008 aa5.59□□□□□ -1.52
SYNE2-206ENST00000441438 HYDINQ4G0P3 5121 aa5.58□□□□□ -1.52
SYNE2-206ENST00000441438 PLAC4Q8WY50 150 aa5.56□□□□□ -1.52
SYNE2-206ENST00000441438 EPPK1P58107 5090 aaKnown RBP5.55□□□□□ -1.52
SYNE2-206ENST00000441438 PKHD1L1Q86WI1 4243 aa5.54□□□□□ -1.52
SYNE2-206ENST00000441438 A0A1B0GVY2 172 aa5.54□□□□□ -1.52
SYNE2-206ENST00000441438 IGKV2-30P06310 120 aa5.51□□□□□ -1.53
SYNE2-206ENST00000441438 Q6ZRN7 208 aaPredicted RBP5.51□□□□□ -1.53
SYNE2-206ENST00000441438 DNAH2Q9P225 4427 aa5.5□□□□□ -1.53
SYNE2-206ENST00000441438 H0YAA0 97 aa5.48□□□□□ -1.53
SYNE2-206ENST00000441438 DNAH8Q96JB1 4490 aa5.48□□□□□ -1.53
SYNE2-206ENST00000441438 FLG2Q5D862 2391 aaPredicted RBP5.47□□□□□ -1.53
SYNE2-206ENST00000441438 MRPL34Q9BQ48 92 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms