RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 A0A1B0GVX0 72 aa7.09□□□□□ -1.27
SMPD4-209ENST00000439886 ASB16-AS1Q495Z4 193 aa7.08□□□□□ -1.28
SMPD4-209ENST00000439886 PANO1I0J062 215 aa7.07□□□□□ -1.28
SMPD4-209ENST00000439886 A0A1B0GU69 56 aa7.06□□□□□ -1.28
SMPD4-209ENST00000439886 C14orf177Q52M58 125 aa7.06□□□□□ -1.28
SMPD4-209ENST00000439886 FLG2Q5D862 2391 aaPredicted RBP7.04□□□□□ -1.28
SMPD4-209ENST00000439886 ACYP2P14621 99 aa7.04□□□□□ -1.28
SMPD4-209ENST00000439886 SPINK1P00995 79 aa7.03□□□□□ -1.28
SMPD4-209ENST00000439886 SPRR1BP22528 89 aa7.02□□□□□ -1.29
SMPD4-209ENST00000439886 KRTAP24-1Q3LI83 254 aa7.02□□□□□ -1.29
SMPD4-209ENST00000439886 Q5W150 140 aa7.02□□□□□ -1.29
SMPD4-209ENST00000439886 Q96NJ1 140 aa7□□□□□ -1.29
SMPD4-209ENST00000439886 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7□□□□□ -1.29
SMPD4-209ENST00000439886 UQCR11O14957 56 aa6.99□□□□□ -1.29
SMPD4-209ENST00000439886 IGKV2D-30A0A075B6S6 120 aa6.98□□□□□ -1.29
SMPD4-209ENST00000439886 IGKV2-30P06310 120 aa6.98□□□□□ -1.29
SMPD4-209ENST00000439886 SPATA8Q6RVD6 105 aa6.95□□□□□ -1.3
SMPD4-209ENST00000439886 PSORS1C2Q9UIG4 136 aa6.95□□□□□ -1.3
SMPD4-209ENST00000439886 DNAH10Q8IVF4 4471 aa6.93□□□□□ -1.3
SMPD4-209ENST00000439886 CRIPTQ9P021 101 aa6.91□□□□□ -1.3
SMPD4-209ENST00000439886 WWC2-AS2Q96NR7 200 aa6.9□□□□□ -1.3
SMPD4-209ENST00000439886 NBDYA0A0U1RRE5 68 aa6.89□□□□□ -1.31
SMPD4-209ENST00000439886 KRTAP25-1Q3LHN0 102 aa6.89□□□□□ -1.31
SMPD4-209ENST00000439886 ANK2Q01484 3957 aa6.89□□□□□ -1.31
SMPD4-209ENST00000439886 P0C880 135 aa6.88□□□□□ -1.31
SMPD4-209ENST00000439886 TGP01266 2768 aa6.88□□□□□ -1.31
SMPD4-209ENST00000439886 KRTAP16-1A8MUX0 517 aa6.88□□□□□ -1.31
SMPD4-209ENST00000439886 ZNF861PO60384 105 aa6.88□□□□□ -1.31
SMPD4-209ENST00000439886 SPINT4Q6UDR6 99 aa6.86□□□□□ -1.31
SMPD4-209ENST00000439886 NDUFAF8A1L188 74 aa6.85□□□□□ -1.31
SMPD4-209ENST00000439886 KRTAP13-1Q8IUC0 172 aa6.85□□□□□ -1.31
SMPD4-209ENST00000439886 APLNQ9ULZ1 77 aa6.85□□□□□ -1.31
SMPD4-209ENST00000439886 SPACA4Q8TDM5 124 aa6.83□□□□□ -1.32
SMPD4-209ENST00000439886 FAM229AH3BQW9 127 aa6.82□□□□□ -1.32
SMPD4-209ENST00000439886 IGLV5-52A0A0A0MRZ9 124 aa6.82□□□□□ -1.32
SMPD4-209ENST00000439886 DMBT1Q9UGM3 2413 aaPredicted RBP6.82□□□□□ -1.32
SMPD4-209ENST00000439886 A8MUU9 505 aa6.82□□□□□ -1.32
SMPD4-209ENST00000439886 SSBP3-AS1Q7Z2R9 100 aa6.82□□□□□ -1.32
SMPD4-209ENST00000439886 Q8N1X5 172 aa6.82□□□□□ -1.32
SMPD4-209ENST00000439886 LYSTQ99698 3801 aa6.81□□□□□ -1.32
SMPD4-209ENST00000439886 DMAC1Q96GE9 116 aa6.8□□□□□ -1.32
SMPD4-209ENST00000439886 FBN3Q75N90 2809 aa6.8□□□□□ -1.32
SMPD4-209ENST00000439886 A0A087WTM6 91 aa6.78□□□□□ -1.32
SMPD4-209ENST00000439886 LINC00483Q53H64 154 aa6.78□□□□□ -1.32
SMPD4-209ENST00000439886 IGLV7-43P04211 117 aa6.74□□□□□ -1.33
SMPD4-209ENST00000439886 C20orf166-AS1Q96NR2 134 aa6.72□□□□□ -1.33
SMPD4-209ENST00000439886 KRTAP13-3Q3SY46 172 aa6.69□□□□□ -1.34
SMPD4-209ENST00000439886 Q6ZRN7 208 aaPredicted RBP6.69□□□□□ -1.34
SMPD4-209ENST00000439886 NUPR2A6NF83 97 aa6.69□□□□□ -1.34
SMPD4-209ENST00000439886 DNAH9Q9NYC9 4486 aa6.69□□□□□ -1.34
SMPD4-209ENST00000439886 LY6G6CO95867 125 aa6.68□□□□□ -1.34
SMPD4-209ENST00000439886 LUZP6Q538Z0 58 aa6.66□□□□□ -1.34
SMPD4-209ENST00000439886 HUWE1Q7Z6Z7 4374 aaKnown RBP6.66□□□□□ -1.34
SMPD4-209ENST00000439886 LINC00304Q8N9R0 145 aa6.65□□□□□ -1.34
SMPD4-209ENST00000439886 MEGF8Q7Z7M0 2845 aa6.65□□□□□ -1.34
SMPD4-209ENST00000439886 DNHD1Q96M86 4753 aa6.6□□□□□ -1.35
SMPD4-209ENST00000439886 DNAH1Q9P2D7 4330 aa6.58□□□□□ -1.36
SMPD4-209ENST00000439886 C9orf92A6NGG3 77 aa6.58□□□□□ -1.36
SMPD4-209ENST00000439886 K7ERS5 55 aa6.58□□□□□ -1.36
SMPD4-209ENST00000439886 FRAS1Q86XX4 4008 aa6.57□□□□□ -1.36
SMPD4-209ENST00000439886 KRTAP13-2Q52LG2 175 aa6.57□□□□□ -1.36
SMPD4-209ENST00000439886 TYMSOSQ8TAI1 123 aa6.56□□□□□ -1.36
SMPD4-209ENST00000439886 A0A1B0GU33 70 aa6.55□□□□□ -1.36
SMPD4-209ENST00000439886 DNAH7Q8WXX0 4024 aa6.54□□□□□ -1.36
SMPD4-209ENST00000439886 Q6ZSA8 131 aa6.52□□□□□ -1.37
SMPD4-209ENST00000439886 KRTAP10-2P60368 255 aa6.52□□□□□ -1.37
SMPD4-209ENST00000439886 CMYA5Q8N3K9 4069 aa6.52□□□□□ -1.37
SMPD4-209ENST00000439886 PLECQ15149 4684 aaKnown RBP6.51□□□□□ -1.37
SMPD4-209ENST00000439886 H0YAA0 97 aa6.5□□□□□ -1.37
SMPD4-209ENST00000439886 DNAH8Q96JB1 4490 aa6.5□□□□□ -1.37
SMPD4-209ENST00000439886 A0A0D9SG42 100 aa6.48□□□□□ -1.37
SMPD4-209ENST00000439886 ALMS1Q8TCU4 4167 aa6.45□□□□□ -1.38
SMPD4-209ENST00000439886 DNAH3Q8TD57 4116 aa6.43□□□□□ -1.38
SMPD4-209ENST00000439886 KRTAP21-3Q3LHN1 58 aa6.43□□□□□ -1.38
SMPD4-209ENST00000439886 H1FX-AS1Q4G0G2 97 aa6.42□□□□□ -1.38
SMPD4-209ENST00000439886 KRTAP10-1P60331 282 aa6.41□□□□□ -1.38
SMPD4-209ENST00000439886 SMR3BP02814 79 aaPredicted RBP6.4□□□□□ -1.38
SMPD4-209ENST00000439886 DNAH17Q9UFH2 4485 aa6.39□□□□□ -1.39
SMPD4-209ENST00000439886 C10orf95Q9H7T3 257 aa6.37□□□□□ -1.39
SMPD4-209ENST00000439886 KRTAP15-1Q3LI76 137 aa6.37□□□□□ -1.39
SMPD4-209ENST00000439886 PRKDCP78527 4128 aaKnown RBP6.37□□□□□ -1.39
SMPD4-209ENST00000439886 SEC61BP60468 96 aaKnown RBP6.35□□□□□ -1.39
SMPD4-209ENST00000439886 KMT2AQ03164 3969 aa6.34□□□□□ -1.4
SMPD4-209ENST00000439886 KRTAP1-4P0C5Y4 121 aa6.33□□□□□ -1.4
SMPD4-209ENST00000439886 STARD9Q9P2P6 4700 aa6.32□□□□□ -1.4
SMPD4-209ENST00000439886 COX6B2Q6YFQ2 88 aa6.32□□□□□ -1.4
SMPD4-209ENST00000439886 DNAH11Q96DT5 4516 aa6.31□□□□□ -1.4
SMPD4-209ENST00000439886 TPRXLQ17RH7 258 aa6.31□□□□□ -1.4
SMPD4-209ENST00000439886 HECTD4Q9Y4D8 3996 aa6.29□□□□□ -1.4
SMPD4-209ENST00000439886 KRTAP3-1Q9BYR8 98 aa6.26□□□□□ -1.41
SMPD4-209ENST00000439886 DNAH2Q9P225 4427 aa6.24□□□□□ -1.41
SMPD4-209ENST00000439886 RPL37P61927 97 aaKnown RBP6.24□□□□□ -1.41
SMPD4-209ENST00000439886 DNAH6Q9C0G6 4158 aa6.24□□□□□ -1.41
SMPD4-209ENST00000439886 LRP1BQ9NZR2 4599 aa6.22□□□□□ -1.41
SMPD4-209ENST00000439886 VPS13DQ5THJ4 4388 aa6.2□□□□□ -1.42
SMPD4-209ENST00000439886 DYNC2H1Q8NCM8 4307 aaKnown RBP6.16□□□□□ -1.42
SMPD4-209ENST00000439886 KRTAP13-4Q3LI77 160 aa6.1□□□□□ -1.43
SMPD4-209ENST00000439886 VPS13BQ7Z7G8 4022 aa6.07□□□□□ -1.44
SMPD4-209ENST00000439886 DNAH5Q8TE73 4624 aa6.06□□□□□ -1.44
SMPD4-209ENST00000439886 S4R3F8 94 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms