RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 KRTAP7-1Q8IUC3 87 aa4.45□□□□□ -1.7
GARNL3-205ENST00000435213 TENM3Q9P273 2699 aa4.45□□□□□ -1.7
GARNL3-205ENST00000435213 NUPR2A6NF83 97 aa4.45□□□□□ -1.7
GARNL3-205ENST00000435213 SPINT4Q6UDR6 99 aa4.44□□□□□ -1.7
GARNL3-205ENST00000435213 C8orf17Q9NRJ1 99 aa4.44□□□□□ -1.7
GARNL3-205ENST00000435213 MMP24-AS1A0A0U1RRL7 71 aa4.43□□□□□ -1.7
GARNL3-205ENST00000435213 J3QL48 77 aa4.43□□□□□ -1.7
GARNL3-205ENST00000435213 LINC00472Q9H8W2 130 aa4.43□□□□□ -1.7
GARNL3-205ENST00000435213 IGLV7-43P04211 117 aa4.42□□□□□ -1.7
GARNL3-205ENST00000435213 ANK2Q01484 3957 aa4.41□□□□□ -1.7
GARNL3-205ENST00000435213 TENM2Q9NT68 2774 aa4.41□□□□□ -1.7
GARNL3-205ENST00000435213 A0A0G2JQZ4 141 aa4.39□□□□□ -1.71
GARNL3-205ENST00000435213 A0A1W2PNN7 141 aa4.39□□□□□ -1.71
GARNL3-205ENST00000435213 Q5W150 140 aa4.39□□□□□ -1.71
GARNL3-205ENST00000435213 SPRR1BP22528 89 aa4.38□□□□□ -1.71
GARNL3-205ENST00000435213 PRLHP81277 87 aa4.37□□□□□ -1.71
GARNL3-205ENST00000435213 LINC00304Q8N9R0 145 aa4.37□□□□□ -1.71
GARNL3-205ENST00000435213 MEGF8Q7Z7M0 2845 aa4.37□□□□□ -1.71
GARNL3-205ENST00000435213 FBN3Q75N90 2809 aa4.36□□□□□ -1.71
GARNL3-205ENST00000435213 SSBP3-AS1Q7Z2R9 100 aa4.35□□□□□ -1.71
GARNL3-205ENST00000435213 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.35□□□□□ -1.71
GARNL3-205ENST00000435213 KRTAP10-11P60412 298 aa4.35□□□□□ -1.71
GARNL3-205ENST00000435213 A0A096LNI7 61 aa4.34□□□□□ -1.71
GARNL3-205ENST00000435213 A0A087WTM6 91 aa4.33□□□□□ -1.72
GARNL3-205ENST00000435213 MRPL34Q9BQ48 92 aaKnown RBP4.32□□□□□ -1.72
GARNL3-205ENST00000435213 DYNC2H1Q8NCM8 4307 aaKnown RBP4.31□□□□□ -1.72
GARNL3-205ENST00000435213 KRTAP15-1Q3LI76 137 aa4.3□□□□□ -1.72
GARNL3-205ENST00000435213 KRTAP11-1Q8IUC1 163 aa4.3□□□□□ -1.72
GARNL3-205ENST00000435213 COL7A1Q02388 2944 aa4.3□□□□□ -1.72
GARNL3-205ENST00000435213 K7EIL1 84 aa4.29□□□□□ -1.72
GARNL3-205ENST00000435213 Q96NJ1 140 aa4.29□□□□□ -1.72
GARNL3-205ENST00000435213 LY6G6CO95867 125 aa4.28□□□□□ -1.72
GARNL3-205ENST00000435213 C14orf177Q52M58 125 aa4.28□□□□□ -1.72
GARNL3-205ENST00000435213 CRIPTQ9P021 101 aa4.27□□□□□ -1.73
GARNL3-205ENST00000435213 DNAH1Q9P2D7 4330 aa4.27□□□□□ -1.73
GARNL3-205ENST00000435213 A0A1B0GVX0 72 aa4.26□□□□□ -1.73
GARNL3-205ENST00000435213 KRTAP13-1Q8IUC0 172 aa4.26□□□□□ -1.73
GARNL3-205ENST00000435213 CIRBP-AS1Q8TBR5 109 aa4.25□□□□□ -1.73
GARNL3-205ENST00000435213 PANO1I0J062 215 aa4.24□□□□□ -1.73
GARNL3-205ENST00000435213 CSMD3Q7Z407 3707 aa4.23□□□□□ -1.73
GARNL3-205ENST00000435213 KRTAP1-5Q9BYS1 174 aa4.23□□□□□ -1.73
GARNL3-205ENST00000435213 PRKDCP78527 4128 aaKnown RBP4.23□□□□□ -1.73
GARNL3-205ENST00000435213 FLG2Q5D862 2391 aaPredicted RBP4.23□□□□□ -1.73
GARNL3-205ENST00000435213 PSORS1C2Q9UIG4 136 aa4.22□□□□□ -1.73
GARNL3-205ENST00000435213 ALMS1Q8TCU4 4167 aa4.22□□□□□ -1.73
GARNL3-205ENST00000435213 NBDYA0A0U1RRE5 68 aa4.2□□□□□ -1.74
GARNL3-205ENST00000435213 H0YAA0 97 aa4.2□□□□□ -1.74
GARNL3-205ENST00000435213 DNAH6Q9C0G6 4158 aa4.19□□□□□ -1.74
GARNL3-205ENST00000435213 KRTAP13-3Q3SY46 172 aa4.19□□□□□ -1.74
GARNL3-205ENST00000435213 Q6ZSA8 131 aa4.18□□□□□ -1.74
GARNL3-205ENST00000435213 UBE2DNLQ8IWF7 75 aa4.18□□□□□ -1.74
GARNL3-205ENST00000435213 DNAH7Q8WXX0 4024 aa4.18□□□□□ -1.74
GARNL3-205ENST00000435213 WWC2-AS2Q96NR7 200 aa4.18□□□□□ -1.74
GARNL3-205ENST00000435213 ANAPC11Q9NYG5 84 aa4.18□□□□□ -1.74
GARNL3-205ENST00000435213 A0A1B0GU33 70 aa4.17□□□□□ -1.74
GARNL3-205ENST00000435213 FAM229AH3BQW9 127 aa4.16□□□□□ -1.74
GARNL3-205ENST00000435213 SPACA4Q8TDM5 124 aa4.16□□□□□ -1.74
GARNL3-205ENST00000435213 CAMK2N1Q7Z7J9 78 aa4.15□□□□□ -1.74
GARNL3-205ENST00000435213 APLNQ9ULZ1 77 aa4.15□□□□□ -1.75
GARNL3-205ENST00000435213 IGKV2-30P06310 120 aa4.14□□□□□ -1.75
GARNL3-205ENST00000435213 KRTAP21-3Q3LHN1 58 aa4.14□□□□□ -1.75
GARNL3-205ENST00000435213 TPRXLQ17RH7 258 aa4.12□□□□□ -1.75
GARNL3-205ENST00000435213 HUWE1Q7Z6Z7 4374 aaKnown RBP4.12□□□□□ -1.75
GARNL3-205ENST00000435213 DNAH9Q9NYC9 4486 aa4.12□□□□□ -1.75
GARNL3-205ENST00000435213 Q6ZRN7 208 aaPredicted RBP4.12□□□□□ -1.75
GARNL3-205ENST00000435213 SPINK1P00995 79 aa4.11□□□□□ -1.75
GARNL3-205ENST00000435213 H1FX-AS1Q4G0G2 97 aa4.11□□□□□ -1.75
GARNL3-205ENST00000435213 SRRM2Q9UQ35 2752 aaKnown RBP4.09□□□□□ -1.75
GARNL3-205ENST00000435213 IGKV2D-30A0A075B6S6 120 aa4.09□□□□□ -1.75
GARNL3-205ENST00000435213 SPINK6Q6UWN8 80 aa4.09□□□□□ -1.75
GARNL3-205ENST00000435213 LYSTQ99698 3801 aa4.08□□□□□ -1.76
GARNL3-205ENST00000435213 DNAH10Q8IVF4 4471 aa4.08□□□□□ -1.76
GARNL3-205ENST00000435213 RPL37P61927 97 aaKnown RBP4.03□□□□□ -1.76
GARNL3-205ENST00000435213 STARD9Q9P2P6 4700 aa4.03□□□□□ -1.76
GARNL3-205ENST00000435213 VPS13DQ5THJ4 4388 aa4.01□□□□□ -1.77
GARNL3-205ENST00000435213 COX6B2Q6YFQ2 88 aa4.01□□□□□ -1.77
GARNL3-205ENST00000435213 C10orf95Q9H7T3 257 aa4.01□□□□□ -1.77
GARNL3-205ENST00000435213 KMT2CQ8NEZ4 4911 aaKnown RBP4□□□□□ -1.77
GARNL3-205ENST00000435213 PLECQ15149 4684 aaKnown RBP3.99□□□□□ -1.77
GARNL3-205ENST00000435213 TYMSOSQ8TAI1 123 aa3.99□□□□□ -1.77
GARNL3-205ENST00000435213 FRAS1Q86XX4 4008 aa3.99□□□□□ -1.77
GARNL3-205ENST00000435213 DNAH8Q96JB1 4490 aa3.95□□□□□ -1.78
GARNL3-205ENST00000435213 KMT2AQ03164 3969 aa3.95□□□□□ -1.78
GARNL3-205ENST00000435213 DNAH2Q9P225 4427 aa3.95□□□□□ -1.78
GARNL3-205ENST00000435213 DNAH17Q9UFH2 4485 aa3.94□□□□□ -1.78
GARNL3-205ENST00000435213 KRTAP13-2Q52LG2 175 aa3.94□□□□□ -1.78
GARNL3-205ENST00000435213 Q8N1X5 172 aa3.94□□□□□ -1.78
GARNL3-205ENST00000435213 HYDINQ4G0P3 5121 aa3.93□□□□□ -1.78
GARNL3-205ENST00000435213 PLAC4Q8WY50 150 aa3.91□□□□□ -1.78
GARNL3-205ENST00000435213 HECTD4Q9Y4D8 3996 aa3.91□□□□□ -1.78
GARNL3-205ENST00000435213 RYR3Q15413 4870 aa3.88□□□□□ -1.79
GARNL3-205ENST00000435213 PKHD1L1Q86WI1 4243 aa3.86□□□□□ -1.79
GARNL3-205ENST00000435213 SMR3BP02814 79 aaPredicted RBP3.86□□□□□ -1.79
GARNL3-205ENST00000435213 KRTAP1-4P0C5Y4 121 aa3.86□□□□□ -1.79
GARNL3-205ENST00000435213 PKD1P98161 4303 aa3.86□□□□□ -1.79
GARNL3-205ENST00000435213 PRO2289Q9P1D8 64 aa3.86□□□□□ -1.79
GARNL3-205ENST00000435213 DNAH11Q96DT5 4516 aa3.85□□□□□ -1.79
GARNL3-205ENST00000435213 KRTAP10-2P60368 255 aa3.85□□□□□ -1.79
GARNL3-205ENST00000435213 DMBT1Q9UGM3 2413 aaPredicted RBP3.85□□□□□ -1.79
GARNL3-205ENST00000435213 A0A0D9SG42 100 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms