RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 SPTAN1Q13813 2472 aaKnown RBP-2.74□□□□□ -2.85
LINC01239-201ENST00000433645 ZC3H13Q5T200 1668 aaKnown RBP-2.75□□□□□ -2.85
LINC01239-201ENST00000433645 TOGARAM1Q9Y4F4 1720 aa-2.75□□□□□ -2.85
LINC01239-201ENST00000433645 UMAD1C9J7I0 102 aa-2.75□□□□□ -2.85
LINC01239-201ENST00000433645 PIK3C2BO00750 1634 aa-2.75□□□□□ -2.85
LINC01239-201ENST00000433645 DNAH17Q9UFH2 4485 aa-2.76□□□□□ -2.85
LINC01239-201ENST00000433645 PARP4Q9UKK3 1724 aaKnown RBP-2.76□□□□□ -2.85
LINC01239-201ENST00000433645 NDUFA4O00483 81 aa-2.77□□□□□ -2.85
LINC01239-201ENST00000433645 SNHG12Q9BXW3 62 aa-2.77□□□□□ -2.85
LINC01239-201ENST00000433645 CCNB3Q8WWL7 1395 aa-2.77□□□□□ -2.85
LINC01239-201ENST00000433645 PEG3Q9GZU2 1588 aa-2.78□□□□□ -2.85
LINC01239-201ENST00000433645 MT1HL1P0DM35 61 aa-2.78□□□□□ -2.85
LINC01239-201ENST00000433645 PYY3Q5JQD4 70 aa-2.78□□□□□ -2.85
LINC01239-201ENST00000433645 TIMM8BQ9Y5J9 83 aaPredicted RBP-2.78□□□□□ -2.85
LINC01239-201ENST00000433645 MAP3K4Q9Y6R4 1608 aa-2.79□□□□□ -2.86
LINC01239-201ENST00000433645 ITSN2Q9NZM3 1697 aa-2.79□□□□□ -2.86
LINC01239-201ENST00000433645 DEFB131BA0A096LNP1 70 aa-2.79□□□□□ -2.86
LINC01239-201ENST00000433645 MMP24-AS1A0A0U1RRL7 71 aa-2.79□□□□□ -2.86
LINC01239-201ENST00000433645 HMGA1P17096 107 aaKnown RBP-2.79□□□□□ -2.86
LINC01239-201ENST00000433645 TNP1P09430 55 aa-2.8□□□□□ -2.86
LINC01239-201ENST00000433645 KIAA0586Q9BVV6 1533 aa-2.8□□□□□ -2.86
LINC01239-201ENST00000433645 CDC42BPAQ5VT25 1732 aa-2.8□□□□□ -2.86
LINC01239-201ENST00000433645 MT1EP04732 61 aa-2.81□□□□□ -2.86
LINC01239-201ENST00000433645 KRTAP8-1Q8IUC2 63 aa-2.81□□□□□ -2.86
LINC01239-201ENST00000433645 CFAP46Q8IYW2 2715 aa-2.82□□□□□ -2.86
LINC01239-201ENST00000433645 EYSQ5T1H1 3165 aa-2.82□□□□□ -2.86
LINC01239-201ENST00000433645 CFAP43Q8NDM7 1665 aa-2.82□□□□□ -2.86
LINC01239-201ENST00000433645 ABCC3O15438 1527 aa-2.83□□□□□ -2.86
LINC01239-201ENST00000433645 PPLO60437 1756 aa-2.83□□□□□ -2.86
LINC01239-201ENST00000433645 KIF14Q15058 1648 aa-2.83□□□□□ -2.86
LINC01239-201ENST00000433645 TJP1Q07157 1748 aa-2.84□□□□□ -2.86
LINC01239-201ENST00000433645 MRPL33O75394 65 aaKnown RBP-2.84□□□□□ -2.86
LINC01239-201ENST00000433645 PKIAP61925 76 aa-2.84□□□□□ -2.86
LINC01239-201ENST00000433645 WT1-ASQ06250 92 aa-2.84□□□□□ -2.86
LINC01239-201ENST00000433645 TRRAPQ9Y4A5 3859 aa-2.85□□□□□ -2.87
LINC01239-201ENST00000433645 IGLV5-48A0A075B6I7 105 aa-2.86□□□□□ -2.87
LINC01239-201ENST00000433645 S100A16Q96FQ6 103 aaKnown RBP-2.86□□□□□ -2.87
LINC01239-201ENST00000433645 RNF17Q9BXT8 1623 aaKnown RBP-2.86□□□□□ -2.87
LINC01239-201ENST00000433645 DNAH5Q8TE73 4624 aa-2.87□□□□□ -2.87
LINC01239-201ENST00000433645 ADGRG4Q8IZF6 3080 aa-2.87□□□□□ -2.87
LINC01239-201ENST00000433645 S100A8P05109 93 aa-2.87□□□□□ -2.87
LINC01239-201ENST00000433645 NREPQ16612 68 aa-2.87□□□□□ -2.87
LINC01239-201ENST00000433645 RICTORQ6R327 1708 aa-2.88□□□□□ -2.87
LINC01239-201ENST00000433645 KIF1AQ12756 1690 aa-2.88□□□□□ -2.87
LINC01239-201ENST00000433645 ATP5EP2Q5VTU8 51 aa-2.9□□□□□ -2.87
LINC01239-201ENST00000433645 MT1LQ93083 61 aa-2.91□□□□□ -2.88
LINC01239-201ENST00000433645 DNAH10Q8IVF4 4471 aa-2.92□□□□□ -2.88
LINC01239-201ENST00000433645 LY75O60449 1722 aa-2.92□□□□□ -2.88
LINC01239-201ENST00000433645 PVALEFA0A1B0GWK0 134 aa-2.92□□□□□ -2.88
LINC01239-201ENST00000433645 MGAQ8IWI9 3026 aa-2.93□□□□□ -2.88
LINC01239-201ENST00000433645 INO80Q9ULG1 1556 aaPredicted RBP-2.93□□□□□ -2.88
LINC01239-201ENST00000433645 KCNQ1DNQ9H478 68 aa-2.94□□□□□ -2.88
LINC01239-201ENST00000433645 HFM1A2PYH4 1435 aa-2.94□□□□□ -2.88
LINC01239-201ENST00000433645 NRAPQ86VF7 1730 aa-2.95□□□□□ -2.88
LINC01239-201ENST00000433645 BVES-AS1Q5T3Y7 98 aa-2.95□□□□□ -2.88
LINC01239-201ENST00000433645 ARHGAP35Q9NRY4 1499 aa-2.96□□□□□ -2.88
LINC01239-201ENST00000433645 KANTRA0A1W2PQU2 76 aa-2.96□□□□□ -2.88
LINC01239-201ENST00000433645 RPS27P42677 84 aaKnown RBP-2.97□□□□□ -2.88
LINC01239-201ENST00000433645 RPS27LQ71UM5 84 aaKnown RBP-2.97□□□□□ -2.88
LINC01239-201ENST00000433645 TTC37Q6PGP7 1564 aa-2.97□□□□□ -2.89
LINC01239-201ENST00000433645 LRRIQ1Q96JM4 1722 aa-2.99□□□□□ -2.89
LINC01239-201ENST00000433645 UBL5Q9BZL1 73 aa-2.99□□□□□ -2.89
LINC01239-201ENST00000433645 Q9H521 79 aa-2.99□□□□□ -2.89
LINC01239-201ENST00000433645 DMXL2Q8TDJ6 3036 aa-3□□□□□ -2.89
LINC01239-201ENST00000433645 RALGAPBQ86X10 1494 aa-3□□□□□ -2.89
LINC01239-201ENST00000433645 CRIP1P50238 77 aa-3□□□□□ -2.89
LINC01239-201ENST00000433645 V9GYS6 101 aa-3□□□□□ -2.89
LINC01239-201ENST00000433645 KDM5DQ9BY66 1539 aa-3.01□□□□□ -2.89
LINC01239-201ENST00000433645 H3BUA1 57 aa-3.02□□□□□ -2.89
LINC01239-201ENST00000433645 NOP10Q9NPE3 64 aaKnown RBP-3.02□□□□□ -2.89
LINC01239-201ENST00000433645 DEFB121Q5J5C9 76 aa-3.03□□□□□ -2.89
LINC01239-201ENST00000433645 NHSQ6T4R5 1651 aa-3.04□□□□□ -2.9
LINC01239-201ENST00000433645 A0A087WXM4 84 aa-3.04□□□□□ -2.9
LINC01239-201ENST00000433645 MINOS1Q5TGZ0 78 aa-3.04□□□□□ -2.9
LINC01239-201ENST00000433645 ITPR2Q14571 2701 aa-3.06□□□□□ -2.9
LINC01239-201ENST00000433645 EIF2AK4Q9P2K8 1649 aaKnown RBP-3.06□□□□□ -2.9
LINC01239-201ENST00000433645 MAST1Q9Y2H9 1570 aa-3.06□□□□□ -2.9
LINC01239-201ENST00000433645 SMIM13P0DJ93 91 aa-3.07□□□□□ -2.9
LINC01239-201ENST00000433645 ATMQ13315 3056 aa-3.08□□□□□ -2.9
LINC01239-201ENST00000433645 UACAQ9BZF9 1416 aa-3.09□□□□□ -2.9
LINC01239-201ENST00000433645 TLN1Q9Y490 2541 aaKnown RBP-3.1□□□□□ -2.9
LINC01239-201ENST00000433645 MT1GP13640 62 aa-3.11□□□□□ -2.91
LINC01239-201ENST00000433645 TDRG1Q3Y452 100 aa-3.11□□□□□ -2.91
LINC01239-201ENST00000433645 MT1MQ8N339 61 aa-3.11□□□□□ -2.91
LINC01239-201ENST00000433645 C6orf48Q9UBA6 75 aa-3.14□□□□□ -2.91
LINC01239-201ENST00000433645 MYO5CQ9NQX4 1742 aa-3.15□□□□□ -2.91
LINC01239-201ENST00000433645 ETDCA0A1B0GVM5 59 aa-3.15□□□□□ -2.91
LINC01239-201ENST00000433645 MT2AP02795 61 aa-3.15□□□□□ -2.91
LINC01239-201ENST00000433645 CD163L1Q9NR16 1453 aa-3.16□□□□□ -2.91
LINC01239-201ENST00000433645 CSMD2Q7Z408 3487 aa-3.16□□□□□ -2.92
LINC01239-201ENST00000433645 CDC42BPGQ6DT37 1551 aa-3.17□□□□□ -2.92
LINC01239-201ENST00000433645 ST20Q9HBF5 79 aa-3.19□□□□□ -2.92
LINC01239-201ENST00000433645 ABCC1P33527 1531 aa-3.19□□□□□ -2.92
LINC01239-201ENST00000433645 FCER1GP30273 86 aa-3.2□□□□□ -2.92
LINC01239-201ENST00000433645 NCBP2-AS2Q69YL0 99 aa-3.2□□□□□ -2.92
LINC01239-201ENST00000433645 M0QZ58 72 aa-3.21□□□□□ -2.92
LINC01239-201ENST00000433645 A0A1B0GUL6 1792 aa-3.22□□□□□ -2.92
LINC01239-201ENST00000433645 MT1BP07438 61 aa-3.22□□□□□ -2.92
LINC01239-201ENST00000433645 KRTAP20-1Q3LI63 56 aa-3.22□□□□□ -2.92
LINC01239-201ENST00000433645 ENHOQ6UWT2 76 aa-3.22□□□□□ -2.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms