RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 A0A1B0GVX0 72 aa5.29□□□□□ -1.56
CDC42BPA-206ENST00000429440 NBEAL1Q6ZS30 2694 aa5.28□□□□□ -1.56
CDC42BPA-206ENST00000429440 HUWE1Q7Z6Z7 4374 aaKnown RBP5.27□□□□□ -1.57
CDC42BPA-206ENST00000429440 KRTAP24-1Q3LI83 254 aa5.27□□□□□ -1.57
CDC42BPA-206ENST00000429440 PRLHP81277 87 aa5.25□□□□□ -1.57
CDC42BPA-206ENST00000429440 KRTAP16-1A8MUX0 517 aa5.25□□□□□ -1.57
CDC42BPA-206ENST00000429440 H3BNG1 76 aa5.25□□□□□ -1.57
CDC42BPA-206ENST00000429440 LINC00304Q8N9R0 145 aa5.25□□□□□ -1.57
CDC42BPA-206ENST00000429440 DNHD1Q96M86 4753 aa5.25□□□□□ -1.57
CDC42BPA-206ENST00000429440 COL6A5A8TX70 2615 aa5.24□□□□□ -1.57
CDC42BPA-206ENST00000429440 Q5W150 140 aa5.24□□□□□ -1.57
CDC42BPA-206ENST00000429440 K7EIL1 84 aa5.23□□□□□ -1.57
CDC42BPA-206ENST00000429440 DNAH10OSP0CZ25 163 aa5.23□□□□□ -1.57
CDC42BPA-206ENST00000429440 CDK2AP2O75956 126 aa5.22□□□□□ -1.57
CDC42BPA-206ENST00000429440 LINC01556Q5JQF7 62 aa5.22□□□□□ -1.57
CDC42BPA-206ENST00000429440 LYSTQ99698 3801 aa5.21□□□□□ -1.58
CDC42BPA-206ENST00000429440 C20orf166-AS1Q96NR2 134 aa5.2□□□□□ -1.58
CDC42BPA-206ENST00000429440 DNAH10Q8IVF4 4471 aa5.2□□□□□ -1.58
CDC42BPA-206ENST00000429440 COL7A1Q02388 2944 aa5.19□□□□□ -1.58
CDC42BPA-206ENST00000429440 DNAH9Q9NYC9 4486 aa5.19□□□□□ -1.58
CDC42BPA-206ENST00000429440 NUPR2A6NF83 97 aa5.18□□□□□ -1.58
CDC42BPA-206ENST00000429440 LY6G6CO95867 125 aa5.18□□□□□ -1.58
CDC42BPA-206ENST00000429440 CASC10Q5T4H9 136 aa5.18□□□□□ -1.58
CDC42BPA-206ENST00000429440 MGAM2Q2M2H8 2515 aa5.16□□□□□ -1.58
CDC42BPA-206ENST00000429440 A0A096LNI7 61 aa5.15□□□□□ -1.58
CDC42BPA-206ENST00000429440 NDUFAF8A1L188 74 aa5.15□□□□□ -1.58
CDC42BPA-206ENST00000429440 STAB2Q8WWQ8 2551 aa5.15□□□□□ -1.58
CDC42BPA-206ENST00000429440 KRTAP11-1Q8IUC1 163 aa5.14□□□□□ -1.59
CDC42BPA-206ENST00000429440 DYNC2H1Q8NCM8 4307 aaKnown RBP5.14□□□□□ -1.59
CDC42BPA-206ENST00000429440 SRRM2Q9UQ35 2752 aaKnown RBP5.13□□□□□ -1.59
CDC42BPA-206ENST00000429440 H0YAA0 97 aa5.13□□□□□ -1.59
CDC42BPA-206ENST00000429440 CSMD3Q7Z407 3707 aa5.13□□□□□ -1.59
CDC42BPA-206ENST00000429440 IGKV2-30P06310 120 aa5.13□□□□□ -1.59
CDC42BPA-206ENST00000429440 DNAH7Q8WXX0 4024 aa5.12□□□□□ -1.59
CDC42BPA-206ENST00000429440 A0A087WTM6 91 aa5.12□□□□□ -1.59
CDC42BPA-206ENST00000429440 FAM229AH3BQW9 127 aa5.12□□□□□ -1.59
CDC42BPA-206ENST00000429440 PANO1I0J062 215 aa5.12□□□□□ -1.59
CDC42BPA-206ENST00000429440 PLECQ15149 4684 aaKnown RBP5.11□□□□□ -1.59
CDC42BPA-206ENST00000429440 SPINT4Q6UDR6 99 aa5.11□□□□□ -1.59
CDC42BPA-206ENST00000429440 Q6ZSA8 131 aa5.11□□□□□ -1.59
CDC42BPA-206ENST00000429440 KRTAP15-1Q3LI76 137 aa5.1□□□□□ -1.59
CDC42BPA-206ENST00000429440 SSBP3-AS1Q7Z2R9 100 aa5.08□□□□□ -1.6
CDC42BPA-206ENST00000429440 CHTF8P0CG12 524 aa5.07□□□□□ -1.6
CDC42BPA-206ENST00000429440 K7ERS5 55 aa5.06□□□□□ -1.6
CDC42BPA-206ENST00000429440 IGKV2D-30A0A075B6S6 120 aa5.05□□□□□ -1.6
CDC42BPA-206ENST00000429440 KRTAP13-1Q8IUC0 172 aa5.05□□□□□ -1.6
CDC42BPA-206ENST00000429440 KRTAP1-5Q9BYS1 174 aa5.05□□□□□ -1.6
CDC42BPA-206ENST00000429440 PSORS1C2Q9UIG4 136 aa5.05□□□□□ -1.6
CDC42BPA-206ENST00000429440 FLG2Q5D862 2391 aaPredicted RBP5.05□□□□□ -1.6
CDC42BPA-206ENST00000429440 IGLV9-49A0A0B4J1Y8 123 aa5.05□□□□□ -1.6
CDC42BPA-206ENST00000429440 ANAPC11Q9NYG5 84 aa5.05□□□□□ -1.6
CDC42BPA-206ENST00000429440 CRIPTQ9P021 101 aa5.04□□□□□ -1.6
CDC42BPA-206ENST00000429440 STARD9Q9P2P6 4700 aa5.04□□□□□ -1.6
CDC42BPA-206ENST00000429440 A0A1B0GU33 70 aa5.03□□□□□ -1.6
CDC42BPA-206ENST00000429440 PRKDCP78527 4128 aaKnown RBP5.02□□□□□ -1.61
CDC42BPA-206ENST00000429440 VPS13DQ5THJ4 4388 aa5.02□□□□□ -1.61
CDC42BPA-206ENST00000429440 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.01□□□□□ -1.61
CDC42BPA-206ENST00000429440 LUZP6Q538Z0 58 aa5□□□□□ -1.61
CDC42BPA-206ENST00000429440 H1FX-AS1Q4G0G2 97 aa4.99□□□□□ -1.61
CDC42BPA-206ENST00000429440 LCE2DQ5TA82 110 aaPredicted RBP4.99□□□□□ -1.61
CDC42BPA-206ENST00000429440 WWC2-AS2Q96NR7 200 aa4.99□□□□□ -1.61
CDC42BPA-206ENST00000429440 APLNQ9ULZ1 77 aa4.98□□□□□ -1.61
CDC42BPA-206ENST00000429440 DNAH2Q9P225 4427 aa4.97□□□□□ -1.61
CDC42BPA-206ENST00000429440 SPINK6Q6UWN8 80 aa4.96□□□□□ -1.61
CDC42BPA-206ENST00000429440 SPINK1P00995 79 aa4.96□□□□□ -1.62
CDC42BPA-206ENST00000429440 TPRXLQ17RH7 258 aa4.95□□□□□ -1.62
CDC42BPA-206ENST00000429440 HECTD4Q9Y4D8 3996 aa4.95□□□□□ -1.62
CDC42BPA-206ENST00000429440 C14orf177Q52M58 125 aa4.95□□□□□ -1.62
CDC42BPA-206ENST00000429440 KMT2AQ03164 3969 aa4.94□□□□□ -1.62
CDC42BPA-206ENST00000429440 DNAH17Q9UFH2 4485 aa4.93□□□□□ -1.62
CDC42BPA-206ENST00000429440 MEGF8Q7Z7M0 2845 aa4.93□□□□□ -1.62
CDC42BPA-206ENST00000429440 TYMSOSQ8TAI1 123 aa4.92□□□□□ -1.62
CDC42BPA-206ENST00000429440 NBDYA0A0U1RRE5 68 aa4.92□□□□□ -1.62
CDC42BPA-206ENST00000429440 SEC61BP60468 96 aaKnown RBP4.92□□□□□ -1.62
CDC42BPA-206ENST00000429440 DNAH8Q96JB1 4490 aa4.91□□□□□ -1.62
CDC42BPA-206ENST00000429440 Q6ZRN7 208 aaPredicted RBP4.91□□□□□ -1.62
CDC42BPA-206ENST00000429440 UBE2DNLQ8IWF7 75 aa4.9□□□□□ -1.62
CDC42BPA-206ENST00000429440 FRAS1Q86XX4 4008 aa4.89□□□□□ -1.63
CDC42BPA-206ENST00000429440 KRTAP3-3Q9BYR6 98 aa4.87□□□□□ -1.63
CDC42BPA-206ENST00000429440 KRTAP3-2Q9BYR7 98 aa4.87□□□□□ -1.63
CDC42BPA-206ENST00000429440 TGP01266 2768 aa4.85□□□□□ -1.63
CDC42BPA-206ENST00000429440 RPL37P61927 97 aaKnown RBP4.85□□□□□ -1.63
CDC42BPA-206ENST00000429440 Q8N1X5 172 aa4.84□□□□□ -1.63
CDC42BPA-206ENST00000429440 DNAH5Q8TE73 4624 aa4.84□□□□□ -1.63
CDC42BPA-206ENST00000429440 COX6B2Q6YFQ2 88 aa4.84□□□□□ -1.64
CDC42BPA-206ENST00000429440 DNAH11Q96DT5 4516 aa4.83□□□□□ -1.64
CDC42BPA-206ENST00000429440 DNAH6Q9C0G6 4158 aa4.83□□□□□ -1.64
CDC42BPA-206ENST00000429440 SPACA4Q8TDM5 124 aa4.81□□□□□ -1.64
CDC42BPA-206ENST00000429440 CIRBP-AS1Q8TBR5 109 aa4.8□□□□□ -1.64
CDC42BPA-206ENST00000429440 C10orf95Q9H7T3 257 aa4.8□□□□□ -1.64
CDC42BPA-206ENST00000429440 HYDINQ4G0P3 5121 aa4.79□□□□□ -1.64
CDC42BPA-206ENST00000429440 FAT2Q9NYQ8 4349 aa4.76□□□□□ -1.65
CDC42BPA-206ENST00000429440 PKD1P98161 4303 aa4.76□□□□□ -1.65
CDC42BPA-206ENST00000429440 LRP1BQ9NZR2 4599 aa4.75□□□□□ -1.65
CDC42BPA-206ENST00000429440 KRTAP17-1Q9BYP8 105 aa4.74□□□□□ -1.65
CDC42BPA-206ENST00000429440 KRTAP3-1Q9BYR8 98 aa4.7□□□□□ -1.66
CDC42BPA-206ENST00000429440 KRTAP10-2P60368 255 aa4.66□□□□□ -1.66
CDC42BPA-206ENST00000429440 VPS13BQ7Z7G8 4022 aa4.66□□□□□ -1.66
CDC42BPA-206ENST00000429440 SACSQ9NZJ4 4579 aa4.66□□□□□ -1.66
CDC42BPA-206ENST00000429440 XP32Q5T750 250 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms