RNA–Protein interactions for RNA: ENST00000422863.1

HLA-DQA1-204, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-204ENST00000422863 IGKCP01834 107 aa3.53□□□□□ -1.84
HLA-DQA1-204ENST00000422863 PLNP26678 52 aa3.53□□□□□ -1.84
HLA-DQA1-204ENST00000422863 Q6JHZ5 121 aa3.53□□□□□ -1.84
HLA-DQA1-204ENST00000422863 LEPROTL1O95214 131 aa3.52□□□□□ -1.85
HLA-DQA1-204ENST00000422863 VAMP3Q15836 100 aa3.52□□□□□ -1.85
HLA-DQA1-204ENST00000422863 SPATA45Q537H7 98 aa3.52□□□□□ -1.85
HLA-DQA1-204ENST00000422863 KMT2DO14686 5537 aa3.51□□□□□ -1.85
HLA-DQA1-204ENST00000422863 KRTAP9-6A8MVA2 160 aa3.51□□□□□ -1.85
HLA-DQA1-204ENST00000422863 E9PLD3 99 aa3.51□□□□□ -1.85
HLA-DQA1-204ENST00000422863 H3BUT2 72 aa3.51□□□□□ -1.85
HLA-DQA1-204ENST00000422863 GTF2H5Q6ZYL4 71 aa3.51□□□□□ -1.85
HLA-DQA1-204ENST00000422863 TTTY13Q9BZ97 58 aa3.51□□□□□ -1.85
HLA-DQA1-204ENST00000422863 PAM16Q9Y3D7 125 aa3.51□□□□□ -1.85
HLA-DQA1-204ENST00000422863 TRAV13-2A0A0B4J235 113 aa3.5□□□□□ -1.85
HLA-DQA1-204ENST00000422863 KRTAP10-5P60370 271 aa3.5□□□□□ -1.85
HLA-DQA1-204ENST00000422863 SMIM11BQ8TCY0 68 aa3.5□□□□□ -1.85
HLA-DQA1-204ENST00000422863 NHP2Q9NX24 153 aaKnown RBP3.5□□□□□ -1.85
HLA-DQA1-204ENST00000422863 HSPB8Q9UJY1 196 aa3.5□□□□□ -1.85
HLA-DQA1-204ENST00000422863 A4D1N5 150 aa3.49□□□□□ -1.85
HLA-DQA1-204ENST00000422863 TIMM17BO60830 172 aa3.49□□□□□ -1.85
HLA-DQA1-204ENST00000422863 LINC00313P59037 77 aa3.49□□□□□ -1.85
HLA-DQA1-204ENST00000422863 Q6ZQY7 126 aa3.49□□□□□ -1.85
HLA-DQA1-204ENST00000422863 KRTAP4-3Q9BYR4 195 aa3.49□□□□□ -1.85
HLA-DQA1-204ENST00000422863 ZNF815PA8K554 130 aa3.48□□□□□ -1.85
HLA-DQA1-204ENST00000422863 J3QR89 54 aa3.48□□□□□ -1.85
HLA-DQA1-204ENST00000422863 TAX1BP3O14907 124 aa3.48□□□□□ -1.85
HLA-DQA1-204ENST00000422863 SIGMAR1Q99720 223 aa3.48□□□□□ -1.85
HLA-DQA1-204ENST00000422863 LINC00575Q6W349 94 aa3.47□□□□□ -1.85
HLA-DQA1-204ENST00000422863 KRTAP5-2Q701N4 177 aa3.47□□□□□ -1.85
HLA-DQA1-204ENST00000422863 SS18L2Q9UHA2 77 aa3.47□□□□□ -1.85
HLA-DQA1-204ENST00000422863 A0A087WSZ3 146 aa3.46□□□□□ -1.86
HLA-DQA1-204ENST00000422863 hADV29S1A0JD25 119 aa3.46□□□□□ -1.86
HLA-DQA1-204ENST00000422863 KRTDAPP60985 99 aa3.46□□□□□ -1.86
HLA-DQA1-204ENST00000422863 MUSTN1Q8IVN3 82 aa3.46□□□□□ -1.86
HLA-DQA1-204ENST00000422863 K7EP34 96 aa3.45□□□□□ -1.86
HLA-DQA1-204ENST00000422863 IGKV2-30P06310 120 aa3.45□□□□□ -1.86
HLA-DQA1-204ENST00000422863 C3orf79P0CE67 100 aa3.45□□□□□ -1.86
HLA-DQA1-204ENST00000422863 HSD52Q0P140 79 aa3.45□□□□□ -1.86
HLA-DQA1-204ENST00000422863 BVES-AS1Q5T3Y7 98 aa3.45□□□□□ -1.86
HLA-DQA1-204ENST00000422863 SPINK7P58062 85 aa3.44□□□□□ -1.86
HLA-DQA1-204ENST00000422863 IGKV4-1P06312 121 aa3.43□□□□□ -1.86
HLA-DQA1-204ENST00000422863 MT1BP07438 61 aa3.43□□□□□ -1.86
HLA-DQA1-204ENST00000422863 DEFB116Q30KQ4 102 aa3.43□□□□□ -1.86
HLA-DQA1-204ENST00000422863 SCGB1D4Q6XE38 83 aa3.43□□□□□ -1.86
HLA-DQA1-204ENST00000422863 TEN1Q86WV5 123 aa3.43□□□□□ -1.86
HLA-DQA1-204ENST00000422863 KRTAP2-1Q9BYU5 128 aa3.43□□□□□ -1.86
HLA-DQA1-204ENST00000422863 A0A1W2PNM2 257 aa3.42□□□□□ -1.86
HLA-DQA1-204ENST00000422863 SPRR2EP22531 72 aa3.42□□□□□ -1.86
HLA-DQA1-204ENST00000422863 SPRR2BP35325 72 aa3.42□□□□□ -1.86
HLA-DQA1-204ENST00000422863 SPRR2AP35326 72 aa3.42□□□□□ -1.86
HLA-DQA1-204ENST00000422863 WFDC13Q8IUB5 93 aa3.42□□□□□ -1.86
HLA-DQA1-204ENST00000422863 IGHV6-1A0A0B4J1U7 121 aa3.41□□□□□ -1.86
HLA-DQA1-204ENST00000422863 F8W1H4 67 aa3.4□□□□□ -1.87
HLA-DQA1-204ENST00000422863 COX8AP10176 69 aa3.4□□□□□ -1.87
HLA-DQA1-204ENST00000422863 FABP2P12104 132 aa3.4□□□□□ -1.87
HLA-DQA1-204ENST00000422863 IFITM1P13164 125 aa3.4□□□□□ -1.87
HLA-DQA1-204ENST00000422863 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.4□□□□□ -1.87
HLA-DQA1-204ENST00000422863 A0A1W2PPM0 123 aa3.39□□□□□ -1.87
HLA-DQA1-204ENST00000422863 Q5VV11 94 aa3.39□□□□□ -1.87
HLA-DQA1-204ENST00000422863 ZCCHC13Q8WW36 166 aaKnown RBP3.39□□□□□ -1.87
HLA-DQA1-204ENST00000422863 COPS9Q8WXC6 57 aa3.39□□□□□ -1.87
HLA-DQA1-204ENST00000422863 SPRR2FQ96RM1 72 aa3.39□□□□□ -1.87
HLA-DQA1-204ENST00000422863 SPCS1Q9Y6A9 102 aa3.39□□□□□ -1.87
HLA-DQA1-204ENST00000422863 SYS1-DBNDD2H3BUS1 97 aa3.38□□□□□ -1.87
HLA-DQA1-204ENST00000422863 LINC01545Q5VT33 79 aa3.37□□□□□ -1.87
HLA-DQA1-204ENST00000422863 C2orf91Q6ZV80 131 aa3.37□□□□□ -1.87
HLA-DQA1-204ENST00000422863 ATOH7Q8N100 152 aa3.37□□□□□ -1.87
HLA-DQA1-204ENST00000422863 NDUFV3P56181 108 aaKnown RBP3.36□□□□□ -1.87
HLA-DQA1-204ENST00000422863 PPDPFLQ8WWR9 84 aa3.36□□□□□ -1.87
HLA-DQA1-204ENST00000422863 FAM218AQ96MZ4 157 aa3.36□□□□□ -1.87
HLA-DQA1-204ENST00000422863 ANAPC13Q9BS18 74 aa3.36□□□□□ -1.87
HLA-DQA1-204ENST00000422863 HIGD1BQ9P298 99 aa3.36□□□□□ -1.87
HLA-DQA1-204ENST00000422863 H3BMG7 143 aa3.35□□□□□ -1.87
HLA-DQA1-204ENST00000422863 C5orf47Q569G3 176 aa3.35□□□□□ -1.87
HLA-DQA1-204ENST00000422863 FAM236AA0A1B0GUQ0 79 aa3.34□□□□□ -1.87
HLA-DQA1-204ENST00000422863 FAM236BA0A1B0GV22 79 aa3.34□□□□□ -1.87
HLA-DQA1-204ENST00000422863 H1FX-AS1Q4G0G2 97 aa3.34□□□□□ -1.87
HLA-DQA1-204ENST00000422863 KRTAP19-8Q3LI54 63 aa3.33□□□□□ -1.88
HLA-DQA1-204ENST00000422863 LYRM7Q5U5X0 104 aa3.33□□□□□ -1.88
HLA-DQA1-204ENST00000422863 LINC00472Q9H8W2 130 aa3.33□□□□□ -1.88
HLA-DQA1-204ENST00000422863 SMIM20Q8N5G0 67 aa3.32□□□□□ -1.88
HLA-DQA1-204ENST00000422863 IMUPQ9GZP8 106 aa3.32□□□□□ -1.88
HLA-DQA1-204ENST00000422863 RAB37Q96AX2 223 aa3.31□□□□□ -1.88
HLA-DQA1-204ENST00000422863 A0A1B0GVX0 72 aa3.3□□□□□ -1.88
HLA-DQA1-204ENST00000422863 C8orf87E5RJ46 101 aa3.3□□□□□ -1.88
HLA-DQA1-204ENST00000422863 SPRR2DP22532 72 aa3.3□□□□□ -1.88
HLA-DQA1-204ENST00000422863 ETDBQ3ZM63 59 aa3.3□□□□□ -1.88
HLA-DQA1-204ENST00000422863 PRO0461Q9UI25 63 aa3.3□□□□□ -1.88
HLA-DQA1-204ENST00000422863 CEND1Q8N111 149 aa3.29□□□□□ -1.88
HLA-DQA1-204ENST00000422863 SNCGO76070 127 aa3.28□□□□□ -1.88
HLA-DQA1-204ENST00000422863 MT-ATP8P03928 68 aa3.28□□□□□ -1.88
HLA-DQA1-204ENST00000422863 ANKRD29Q8N6D5 301 aa3.28□□□□□ -1.88
HLA-DQA1-204ENST00000422863 NAA38Q9BRA0 125 aaKnown RBP3.28□□□□□ -1.88
HLA-DQA1-204ENST00000422863 SPRR2GQ9BYE4 73 aa3.28□□□□□ -1.88
HLA-DQA1-204ENST00000422863 TRBV7-4A0A0J9YYF1 115 aa3.27□□□□□ -1.89
HLA-DQA1-204ENST00000422863 A0A1B0GX51 115 aa3.27□□□□□ -1.89
HLA-DQA1-204ENST00000422863 FXYD2P54710 66 aa3.27□□□□□ -1.89
HLA-DQA1-204ENST00000422863 RPS28P62857 69 aaKnown RBP3.27□□□□□ -1.89
HLA-DQA1-204ENST00000422863 GPR98Q8WXG9 6306 aa3.25□□□□□ -1.89
HLA-DQA1-204ENST00000422863 IGKV3D-7A0A0C4DH55 119 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms