RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 CMYA5Q8N3K9 4069 aa4.83□□□□□ -1.64
SIK3-203ENST00000415541 KRTAP26-1Q6PEX3 210 aa4.82□□□□□ -1.64
SIK3-203ENST00000415541 A0A087WTM6 91 aa4.81□□□□□ -1.64
SIK3-203ENST00000415541 DNAH1Q9P2D7 4330 aa4.81□□□□□ -1.64
SIK3-203ENST00000415541 C8orf17Q9NRJ1 99 aa4.79□□□□□ -1.64
SIK3-203ENST00000415541 SPINK6Q6UWN8 80 aa4.78□□□□□ -1.64
SIK3-203ENST00000415541 DNAH3Q8TD57 4116 aa4.77□□□□□ -1.65
SIK3-203ENST00000415541 IGHV6-1A0A0B4J1U7 121 aa4.77□□□□□ -1.65
SIK3-203ENST00000415541 MRPL34Q9BQ48 92 aaKnown RBP4.77□□□□□ -1.65
SIK3-203ENST00000415541 CIRBP-AS1Q8TBR5 109 aa4.75□□□□□ -1.65
SIK3-203ENST00000415541 ROMO1P60602 79 aa4.74□□□□□ -1.65
SIK3-203ENST00000415541 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.74□□□□□ -1.65
SIK3-203ENST00000415541 A0A1B0GVX0 72 aa4.73□□□□□ -1.65
SIK3-203ENST00000415541 SPRR1BP22528 89 aa4.73□□□□□ -1.65
SIK3-203ENST00000415541 ANAPC11Q9NYG5 84 aa4.73□□□□□ -1.65
SIK3-203ENST00000415541 ZNF861PO60384 105 aa4.7□□□□□ -1.66
SIK3-203ENST00000415541 DMAC1Q96GE9 116 aa4.7□□□□□ -1.66
SIK3-203ENST00000415541 PSORS1C2Q9UIG4 136 aa4.7□□□□□ -1.66
SIK3-203ENST00000415541 KRTAP25-1Q3LHN0 102 aa4.7□□□□□ -1.66
SIK3-203ENST00000415541 PANO1I0J062 215 aa4.69□□□□□ -1.66
SIK3-203ENST00000415541 SMR3BP02814 79 aaPredicted RBP4.69□□□□□ -1.66
SIK3-203ENST00000415541 LYSTQ99698 3801 aa4.69□□□□□ -1.66
SIK3-203ENST00000415541 DMBT1Q9UGM3 2413 aaPredicted RBP4.68□□□□□ -1.66
SIK3-203ENST00000415541 DNAH10Q8IVF4 4471 aa4.68□□□□□ -1.66
SIK3-203ENST00000415541 KRTAP7-1Q8IUC3 87 aa4.68□□□□□ -1.66
SIK3-203ENST00000415541 FBN3Q75N90 2809 aa4.66□□□□□ -1.66
SIK3-203ENST00000415541 HUWE1Q7Z6Z7 4374 aaKnown RBP4.66□□□□□ -1.66
SIK3-203ENST00000415541 SPACA4Q8TDM5 124 aa4.65□□□□□ -1.67
SIK3-203ENST00000415541 KRTAP10-2P60368 255 aa4.65□□□□□ -1.67
SIK3-203ENST00000415541 DNAH9Q9NYC9 4486 aa4.65□□□□□ -1.67
SIK3-203ENST00000415541 IGLV7-43P04211 117 aa4.64□□□□□ -1.67
SIK3-203ENST00000415541 Q6ZRN7 208 aaPredicted RBP4.64□□□□□ -1.67
SIK3-203ENST00000415541 Q96NJ1 140 aa4.63□□□□□ -1.67
SIK3-203ENST00000415541 K7ERS5 55 aa4.62□□□□□ -1.67
SIK3-203ENST00000415541 KRTAP11-1Q8IUC1 163 aa4.62□□□□□ -1.67
SIK3-203ENST00000415541 CSMD3Q7Z407 3707 aa4.61□□□□□ -1.67
SIK3-203ENST00000415541 FAM229AH3BQW9 127 aa4.61□□□□□ -1.67
SIK3-203ENST00000415541 Q5W150 140 aa4.6□□□□□ -1.67
SIK3-203ENST00000415541 NOTCH2NLQ7Z3S9 236 aa4.6□□□□□ -1.67
SIK3-203ENST00000415541 FLG2Q5D862 2391 aaPredicted RBP4.6□□□□□ -1.67
SIK3-203ENST00000415541 SRRM2Q9UQ35 2752 aaKnown RBP4.6□□□□□ -1.67
SIK3-203ENST00000415541 KRTAP10-1P60331 282 aa4.59□□□□□ -1.67
SIK3-203ENST00000415541 MEGF8Q7Z7M0 2845 aa4.59□□□□□ -1.67
SIK3-203ENST00000415541 DNAH7Q8WXX0 4024 aa4.59□□□□□ -1.67
SIK3-203ENST00000415541 KRTAP21-3Q3LHN1 58 aa4.58□□□□□ -1.68
SIK3-203ENST00000415541 TYMSOSQ8TAI1 123 aa4.58□□□□□ -1.68
SIK3-203ENST00000415541 A0A0A0MQY5 61 aa4.58□□□□□ -1.68
SIK3-203ENST00000415541 COL7A1Q02388 2944 aa4.58□□□□□ -1.68
SIK3-203ENST00000415541 DYNC2H1Q8NCM8 4307 aaKnown RBP4.57□□□□□ -1.68
SIK3-203ENST00000415541 A8MUU9 505 aa4.56□□□□□ -1.68
SIK3-203ENST00000415541 KRTAP13-3Q3SY46 172 aa4.56□□□□□ -1.68
SIK3-203ENST00000415541 LINC00483Q53H64 154 aa4.55□□□□□ -1.68
SIK3-203ENST00000415541 SPINT4Q6UDR6 99 aa4.55□□□□□ -1.68
SIK3-203ENST00000415541 IGKV2-30P06310 120 aa4.55□□□□□ -1.68
SIK3-203ENST00000415541 SSBP3-AS1Q7Z2R9 100 aa4.54□□□□□ -1.68
SIK3-203ENST00000415541 LINC00304Q8N9R0 145 aa4.54□□□□□ -1.68
SIK3-203ENST00000415541 KRTAP16-1A8MUX0 517 aa4.52□□□□□ -1.69
SIK3-203ENST00000415541 SPINK1P00995 79 aa4.52□□□□□ -1.69
SIK3-203ENST00000415541 P0C880 135 aa4.52□□□□□ -1.69
SIK3-203ENST00000415541 PLECQ15149 4684 aaKnown RBP4.52□□□□□ -1.69
SIK3-203ENST00000415541 IGKV2D-30A0A075B6S6 120 aa4.49□□□□□ -1.69
SIK3-203ENST00000415541 A0A1B0GU33 70 aa4.48□□□□□ -1.69
SIK3-203ENST00000415541 KRTAP13-1Q8IUC0 172 aa4.46□□□□□ -1.69
SIK3-203ENST00000415541 HECTD4Q9Y4D8 3996 aa4.46□□□□□ -1.7
SIK3-203ENST00000415541 C20orf166-AS1Q96NR2 134 aa4.46□□□□□ -1.7
SIK3-203ENST00000415541 NDUFAF8A1L188 74 aa4.45□□□□□ -1.7
SIK3-203ENST00000415541 CRIPTQ9P021 101 aa4.45□□□□□ -1.7
SIK3-203ENST00000415541 H0YAA0 97 aa4.44□□□□□ -1.7
SIK3-203ENST00000415541 Q6ZSA8 131 aa4.44□□□□□ -1.7
SIK3-203ENST00000415541 FRAS1Q86XX4 4008 aa4.44□□□□□ -1.7
SIK3-203ENST00000415541 DNAH8Q96JB1 4490 aa4.44□□□□□ -1.7
SIK3-203ENST00000415541 DNAH2Q9P225 4427 aa4.43□□□□□ -1.7
SIK3-203ENST00000415541 C9orf92A6NGG3 77 aa4.43□□□□□ -1.7
SIK3-203ENST00000415541 STARD9Q9P2P6 4700 aa4.43□□□□□ -1.7
SIK3-203ENST00000415541 VPS13DQ5THJ4 4388 aa4.43□□□□□ -1.7
SIK3-203ENST00000415541 PRKDCP78527 4128 aaKnown RBP4.42□□□□□ -1.7
SIK3-203ENST00000415541 DNHD1Q96M86 4753 aa4.42□□□□□ -1.7
SIK3-203ENST00000415541 ALMS1Q8TCU4 4167 aa4.42□□□□□ -1.7
SIK3-203ENST00000415541 H1FX-AS1Q4G0G2 97 aa4.42□□□□□ -1.7
SIK3-203ENST00000415541 DNAH17Q9UFH2 4485 aa4.39□□□□□ -1.71
SIK3-203ENST00000415541 KMT2AQ03164 3969 aa4.38□□□□□ -1.71
SIK3-203ENST00000415541 Q5VSD8 79 aa4.37□□□□□ -1.71
SIK3-203ENST00000415541 Q8N1X5 172 aa4.37□□□□□ -1.71
SIK3-203ENST00000415541 KRTAP13-2Q52LG2 175 aa4.35□□□□□ -1.71
SIK3-203ENST00000415541 J3QL48 77 aa4.33□□□□□ -1.72
SIK3-203ENST00000415541 LUZP6Q538Z0 58 aa4.33□□□□□ -1.72
SIK3-203ENST00000415541 KRTAP15-1Q3LI76 137 aa4.31□□□□□ -1.72
SIK3-203ENST00000415541 DNAH6Q9C0G6 4158 aa4.31□□□□□ -1.72
SIK3-203ENST00000415541 RPL37P61927 97 aaKnown RBP4.31□□□□□ -1.72
SIK3-203ENST00000415541 DNAH11Q96DT5 4516 aa4.3□□□□□ -1.72
SIK3-203ENST00000415541 DNAH5Q8TE73 4624 aa4.3□□□□□ -1.72
SIK3-203ENST00000415541 KRTAP1-4P0C5Y4 121 aa4.27□□□□□ -1.73
SIK3-203ENST00000415541 COX6B2Q6YFQ2 88 aa4.26□□□□□ -1.73
SIK3-203ENST00000415541 TPRXLQ17RH7 258 aa4.26□□□□□ -1.73
SIK3-203ENST00000415541 PKD1P98161 4303 aa4.23□□□□□ -1.73
SIK3-203ENST00000415541 A0A1B0GVY2 172 aa4.22□□□□□ -1.73
SIK3-203ENST00000415541 LRP1BQ9NZR2 4599 aa4.22□□□□□ -1.73
SIK3-203ENST00000415541 FAT2Q9NYQ8 4349 aa4.21□□□□□ -1.74
SIK3-203ENST00000415541 C10orf95Q9H7T3 257 aa4.19□□□□□ -1.74
SIK3-203ENST00000415541 HYDINQ4G0P3 5121 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms