RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 A8MWP4 228 aa12.5□□□□□ -0.41
AP1S3-205ENST00000415298 Q6ZRX8 168 aa12.48□□□□□ -0.41
AP1S3-205ENST00000415298 ZNF861PO60384 105 aa12.47□□□□□ -0.41
AP1S3-205ENST00000415298 NOTCH2NLQ7Z3S9 236 aa12.47□□□□□ -0.41
AP1S3-205ENST00000415298 A0A087WSZ3 146 aa12.45□□□□□ -0.42
AP1S3-205ENST00000415298 Q6ZRN7 208 aaPredicted RBP12.45□□□□□ -0.42
AP1S3-205ENST00000415298 IGKV2-24A0A0C4DH68 120 aa12.44□□□□□ -0.42
AP1S3-205ENST00000415298 C15orf56Q8N910 161 aa12.44□□□□□ -0.42
AP1S3-205ENST00000415298 A0A1B0GU69 56 aa12.43□□□□□ -0.42
AP1S3-205ENST00000415298 UQCR11O14957 56 aa12.43□□□□□ -0.42
AP1S3-205ENST00000415298 KRTAP25-1Q3LHN0 102 aa12.42□□□□□ -0.42
AP1S3-205ENST00000415298 TP53AIP1Q9HCN2 124 aa12.42□□□□□ -0.42
AP1S3-205ENST00000415298 DNAH6Q9C0G6 4158 aa12.41□□□□□ -0.42
AP1S3-205ENST00000415298 IGFL1Q6UW32 110 aa12.41□□□□□ -0.42
AP1S3-205ENST00000415298 P0C880 135 aa12.41□□□□□ -0.42
AP1S3-205ENST00000415298 CAMK2N2Q96S95 79 aa12.4□□□□□ -0.42
AP1S3-205ENST00000415298 A0A0G2JQZ4 141 aa12.37□□□□□ -0.43
AP1S3-205ENST00000415298 A0A1W2PNN7 141 aa12.37□□□□□ -0.43
AP1S3-205ENST00000415298 MMP24-AS1A0A0U1RRL7 71 aa12.36□□□□□ -0.43
AP1S3-205ENST00000415298 KRTAP4-16G5E9R7 235 aaPredicted RBP12.36□□□□□ -0.43
AP1S3-205ENST00000415298 DNAH17Q9UFH2 4485 aa12.35□□□□□ -0.43
AP1S3-205ENST00000415298 FRAS1Q86XX4 4008 aa12.35□□□□□ -0.43
AP1S3-205ENST00000415298 RYR2Q92736 4967 aa12.32□□□□□ -0.44
AP1S3-205ENST00000415298 FAT2Q9NYQ8 4349 aa12.29□□□□□ -0.44
AP1S3-205ENST00000415298 A0A087WTM6 91 aa12.29□□□□□ -0.44
AP1S3-205ENST00000415298 ACYP2P14621 99 aa12.29□□□□□ -0.44
AP1S3-205ENST00000415298 SPRR1AP35321 89 aa12.28□□□□□ -0.44
AP1S3-205ENST00000415298 LINC00472Q9H8W2 130 aa12.28□□□□□ -0.44
AP1S3-205ENST00000415298 IGLV8-61A0A075B6I0 122 aa12.26□□□□□ -0.45
AP1S3-205ENST00000415298 RYR3Q15413 4870 aa12.25□□□□□ -0.45
AP1S3-205ENST00000415298 DNAH11Q96DT5 4516 aa12.21□□□□□ -0.45
AP1S3-205ENST00000415298 LINC00483Q53H64 154 aa12.21□□□□□ -0.45
AP1S3-205ENST00000415298 RPL37AP8A6NKH3 93 aa12.2□□□□□ -0.46
AP1S3-205ENST00000415298 HECTD4Q9Y4D8 3996 aa12.2□□□□□ -0.46
AP1S3-205ENST00000415298 IGLV5-52A0A0A0MRZ9 124 aa12.19□□□□□ -0.46
AP1S3-205ENST00000415298 C14orf177Q52M58 125 aa12.19□□□□□ -0.46
AP1S3-205ENST00000415298 FAM168BA1KXE4 195 aa12.18□□□□□ -0.46
AP1S3-205ENST00000415298 PKD1P98161 4303 aa12.18□□□□□ -0.46
AP1S3-205ENST00000415298 KRTAP10-2P60368 255 aa12.16□□□□□ -0.46
AP1S3-205ENST00000415298 A8MUU9 505 aa12.16□□□□□ -0.46
AP1S3-205ENST00000415298 KRTAP16-1A8MUX0 517 aa12.15□□□□□ -0.46
AP1S3-205ENST00000415298 DMAC1Q96GE9 116 aa12.13□□□□□ -0.47
AP1S3-205ENST00000415298 PLA2G2DQ9UNK4 145 aa12.12□□□□□ -0.47
AP1S3-205ENST00000415298 DNAH5Q8TE73 4624 aa12.12□□□□□ -0.47
AP1S3-205ENST00000415298 PKHD1P08F94 4074 aa12.09□□□□□ -0.47
AP1S3-205ENST00000415298 CHTF8P0CG12 524 aa12.08□□□□□ -0.48
AP1S3-205ENST00000415298 A0A096LNI7 61 aa12.07□□□□□ -0.48
AP1S3-205ENST00000415298 TLX1NBP0CAT3 122 aa12.06□□□□□ -0.48
AP1S3-205ENST00000415298 PANO1I0J062 215 aa12.06□□□□□ -0.48
AP1S3-205ENST00000415298 C8orf17Q9NRJ1 99 aa12.03□□□□□ -0.48
AP1S3-205ENST00000415298 A0A1B0GVY2 172 aa12.01□□□□□ -0.49
AP1S3-205ENST00000415298 IGLV7-43P04211 117 aa12.01□□□□□ -0.49
AP1S3-205ENST00000415298 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.01□□□□□ -0.49
AP1S3-205ENST00000415298 KRTAP7-1Q8IUC3 87 aa12□□□□□ -0.49
AP1S3-205ENST00000415298 C20orf166-AS1Q96NR2 134 aa11.98□□□□□ -0.49
AP1S3-205ENST00000415298 KRTAP10-1P60331 282 aa11.97□□□□□ -0.49
AP1S3-205ENST00000415298 LINC00304Q8N9R0 145 aa11.96□□□□□ -0.49
AP1S3-205ENST00000415298 NDUFAF8A1L188 74 aa11.95□□□□□ -0.5
AP1S3-205ENST00000415298 MRPL34Q9BQ48 92 aaKnown RBP11.94□□□□□ -0.5
AP1S3-205ENST00000415298 LRP1BQ9NZR2 4599 aa11.94□□□□□ -0.5
AP1S3-205ENST00000415298 DNAH8Q96JB1 4490 aa11.93□□□□□ -0.5
AP1S3-205ENST00000415298 SPACA4Q8TDM5 124 aa11.92□□□□□ -0.5
AP1S3-205ENST00000415298 DYNC1H1Q14204 4646 aaKnown RBP11.9□□□□□ -0.5
AP1S3-205ENST00000415298 Q96NJ1 140 aa11.86□□□□□ -0.51
AP1S3-205ENST00000415298 EPPK1P58107 5090 aaKnown RBP11.84□□□□□ -0.51
AP1S3-205ENST00000415298 A0A1B0GVX0 72 aa11.83□□□□□ -0.52
AP1S3-205ENST00000415298 KRTAP13-3Q3SY46 172 aa11.83□□□□□ -0.52
AP1S3-205ENST00000415298 Q6ZSA8 131 aa11.83□□□□□ -0.52
AP1S3-205ENST00000415298 KRTAP11-1Q8IUC1 163 aa11.83□□□□□ -0.52
AP1S3-205ENST00000415298 CIRBP-AS1Q8TBR5 109 aa11.83□□□□□ -0.52
AP1S3-205ENST00000415298 PRLHP81277 87 aa11.81□□□□□ -0.52
AP1S3-205ENST00000415298 Q5W150 140 aa11.8□□□□□ -0.52
AP1S3-205ENST00000415298 SPRR1BP22528 89 aa11.8□□□□□ -0.52
AP1S3-205ENST00000415298 SPINT4Q6UDR6 99 aa11.79□□□□□ -0.52
AP1S3-205ENST00000415298 APOBP04114 4563 aaKnown RBP11.75□□□□□ -0.53
AP1S3-205ENST00000415298 CDK2AP2O75956 126 aa11.71□□□□□ -0.53
AP1S3-205ENST00000415298 CRIPTQ9P021 101 aa11.71□□□□□ -0.53
AP1S3-205ENST00000415298 SSBP3-AS1Q7Z2R9 100 aa11.69□□□□□ -0.54
AP1S3-205ENST00000415298 KRTAP15-1Q3LI76 137 aa11.68□□□□□ -0.54
AP1S3-205ENST00000415298 SMR3BP02814 79 aaPredicted RBP11.67□□□□□ -0.54
AP1S3-205ENST00000415298 SRRM2Q9UQ35 2752 aaKnown RBP11.67□□□□□ -0.54
AP1S3-205ENST00000415298 FAT1Q14517 4588 aa11.66□□□□□ -0.54
AP1S3-205ENST00000415298 H0YAA0 97 aa11.66□□□□□ -0.54
AP1S3-205ENST00000415298 LUZP6Q538Z0 58 aa11.65□□□□□ -0.54
AP1S3-205ENST00000415298 PSORS1C2Q9UIG4 136 aa11.65□□□□□ -0.54
AP1S3-205ENST00000415298 VPS13BQ7Z7G8 4022 aa11.64□□□□□ -0.55
AP1S3-205ENST00000415298 KIAA1109Q2LD37 5005 aa11.62□□□□□ -0.55
AP1S3-205ENST00000415298 HSPG2P98160 4391 aa11.59□□□□□ -0.55
AP1S3-205ENST00000415298 FLG2Q5D862 2391 aaPredicted RBP11.57□□□□□ -0.56
AP1S3-205ENST00000415298 K7ERS5 55 aa11.55□□□□□ -0.56
AP1S3-205ENST00000415298 KRTAP17-1Q9BYP8 105 aa11.54□□□□□ -0.56
AP1S3-205ENST00000415298 RYR1P21817 5038 aa11.52□□□□□ -0.57
AP1S3-205ENST00000415298 KRTAP13-1Q8IUC0 172 aa11.51□□□□□ -0.57
AP1S3-205ENST00000415298 IGKV2-30P06310 120 aa11.48□□□□□ -0.57
AP1S3-205ENST00000415298 SEC61BP60468 96 aaKnown RBP11.45□□□□□ -0.58
AP1S3-205ENST00000415298 KRTAP10-4P60372 401 aaPredicted RBP11.44□□□□□ -0.58
AP1S3-205ENST00000415298 FAM229AH3BQW9 127 aa11.42□□□□□ -0.58
AP1S3-205ENST00000415298 IGLV9-49A0A0B4J1Y8 123 aa11.38□□□□□ -0.59
AP1S3-205ENST00000415298 Q5VSD8 79 aa11.38□□□□□ -0.59
AP1S3-205ENST00000415298 ANAPC11Q9NYG5 84 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms